Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2177 ATGGCGACACAGAAACCAACACCGCAAACTGTTCCGCATATGGATAAAACAGTGGCTTGTGCTTTTTTGGCGATTCGGTTTCACTCTCCAGAATCCCAGTTCCATGCCCTCAGCAAGAGCTCGACAAGAATCCATGGCAACGCTCAGGATGATTGCCAGAGTTTTCTTGGCCTAACTGAGTTTGAAGCTAAGTGCTCTGTTCTTAAATCCAGCAACCCTTGCAACACCCAAGGATATATAGATTATCTTTACATTTTCTATTGTCAGTATGGAAGTTTTAGCATCCTGGGCTACACTCTGTTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTTTGGGTAACACAGCCTCAGAATACTTTTGCTCTTCCCTTGAGAGTTTGTCAAAATTGTTGAATCTGTCCCCAACTATTGCTGGTGTTACTCTGCTTTCTCTTGGCAATGGGGCACCTGATGTTTTTGCCAGCCTTGTGGCTTTCATGGGGGATGGAACTGGTGATGTTGGCTTGAATACTGTTCTTGGCGGAGCCTCGTTCGTTACCTGCGTCGTCGTCGGAATCATAAGCATTTTGCTGCGTCCGCGACGAATTAAGGTGAATAGGTCTGCCTTCATTAGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTGTCTGTTTTCTTGATATTGCTTCACGGTCATATCAATCTGTGGGGTTCCATTGGCTTTTCTTCCATGTATATTGTTTATGTTTTGGTTGTTTATATCTCCCATGCCCAATGGTTGAGATTTAGAAGTGATATTTGCCAACCCCTTTTGAAAGAGCCACCAAAGGATGAGTTTGAGGGTCAAAATGAATCAAGAGATGATGAGGACGAGGACGAGGACGACGACGACGTTAGAATCGATGTATATGATCTTTGTTTTTGTCCAAGACTGTCACCTTCTTGTCTCATTTTCCTTCGCATTCTTGAGATTCCTCTTTACTTGCCTAGAAGATTGACAATTCCAGCCATTGCTGAAGAAAACTGGTCTAGACCATTTGCAGTTGCTTCAGTAACATTTGCTCCCCTTCTCCTATCCCTTCTATGGGCATTTAACCACCAGGGCGATACGTCTGAGGCGAACTTGATCATCTGCGTCGTGGCTTTGCTCCTCGGATTTAGTTTTGGAATTGTTGCATTTGCAACAACTGAGAATTCAAGCCCACCAAAGAAGTGCCTGTTCCCTTGGCTTGCAGCTGGTTTCACCATGAGTTTAACATGGAGTTATATTGTAGCTCAGGAACTGGTAGGCCTGTTGGTTTCACTTGGCTACATAATGGGCATAAGCCCTTCAATCCTAGGACTTACCTTCCTGGCTTGGGGAAACTCTCTAGGGGATTTGGTTGCCAATGTGACCATGGCCTTGAACGGCGGGCAGCGAGGCGCCCAAATCGCCATCTCCGGCTGCTATGCTGGCCCCATCTTCAACACTCTGTTCGGCCTCGGGATGTCTCTCGTTGGCGCCTCGTGGAAGAAGTATCCTCAGCCGGTGACCATCCCCCCAGACCCTTATGTGATGGAGACGTTGGGGCTGTTGGTAGGAGGGTTGCTTTGGGCACTTCTGGCTTTGCCAAGGAGAGAGATGAGGCTTGATGCAGTCTTGGGAGGAGGCCTTCTGGCTATCTACCTGACCTCTTTGCTCTTAAGGCTGTTGCAAGCTTTTGGGTCTTCCCTTTAG 1695 46.78 MATQKPTPQTVPHMDKTVACAFLAIRFHSPESQFHALSKSSTRIHGNAQDDCQSFLGLTEFEAKCSVLKSSNPCNTQGYIDYLYIFYCQYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFASLVAFMGDGTGDVGLNTVLGGASFVTCVVVGIISILLRPRRIKVNRSAFIRDVLFFLLVLLSVFLILLHGHINLWGSIGFSSMYIVYVLVVYISHAQWLRFRSDICQPLLKEPPKDEFEGQNESRDDEDEDEDDDDVRIDVYDLCFCPRLSPSCLIFLRILEIPLYLPRRLTIPAIAEENWSRPFAVASVTFAPLLLSLLWAFNHQGDTSEANLIICVVALLLGFSFGIVAFATTENSSPPKKCLFPWLAAGFTMSLTWSYIVAQELVGLLVSLGYIMGISPSILGLTFLAWGNSLGDLVANVTMALNGGQRGAQIAISGCYAGPIFNTLFGLGMSLVGASWKKYPQPVTIPPDPYVMETLGLLVGGLLWALLALPRREMRLDAVLGGGLLAIYLTSLLLRLLQAFGSSL 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 35700419 35702458 - Lag0022694.1 Lac7g2177 615078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2177 564 Pfam Sodium/calcium exchanger protein 102 246 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Lac7g2177 564 Pfam Sodium/calcium exchanger protein 403 556 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Lac7g2177 564 Gene3D - 340 556 IPR044880 -
Lac7g2177 564 Gene3D - 133 256 IPR044880 -
Lac7g2177 564 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 19 562 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
Lac7g2177 564 MobiDBLite consensus disorder prediction 266 288 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g1094 Lac-Chr3:9009710 Lac7g2177 Lac-Chr7:35700419 2.50E-113 transposed
Lac3g2643 Lac-Chr3:40982215 Lac7g2177 Lac-Chr7:35700419 6.60E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2177 K13754 - csv:101204766 911.753