Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2458 ATGGGTAGCAATAATAATAACATTGAGGGGTCTCCAGGGAGCTCAATGCATGGAGTGACAGGCAGAGAGCAGACGTTTGCGTTCTCTGTGGCTTCCCCAATCGTCCCAACGGATACCACTGCTAAATTCGCTCTCCCAGTGGACTCTGAGCACAAGGCGAAGGTGTTCAAGCTGTTCTCTTTGGCGAACCCACACATGAGAACCTTTCACCTCTCATGGATCTCCTTCTTCACTTGCTTTGTTTCAACCTTCGCTGCAGCCCCTCTGGTCCCTATCATTCGGGACAACCTTAACCTCACCAAAGTCGACATTGGCAACGCTGGAGTCACCTCTGTCTCTGGCAGCATTTTCTCTCGTCTTGTCATGGGCGCTGTCTGTGACCTTCTCGGCCCTCGCTACGGCTGCGCCTTTCTCATCATGCTCTCCGCTCCCACTGTCTTCTGCATGTCCTTTGTCTCCTCTGCTGGTGGCTACATAGCCGTCAGGTTCATGATTGGATTCTCTCTTGCCACCTTCGTCTCCTGCCAGTATTGGATGAGCACCATGTTCAACAGCCAGATCATTGGCCTTGTCAATGGCACTGCTGCTGGCTGGGGCAACATGGGTGGAGGAGCCACTCAGCTCATCATGCCTTTGCTTTATGATGTTATCAAGAGAGCCGGTGCCACTCCCTTCACTGCTTGGAGGATTGCCTTCTTCATCCCTGGCTGGCTTCATATCATTATGGGCATTTTGGTTTTGACTCTTGGCCAGGATTTGCCTGATGGGAATCTCAGTAGCCTTCAGAAGAAGGGTAATGTTGCCAAAGATAAATTCTCCAATGTGCTATGGTATGCTGTCACTAATTACAGAACTTGGATCTTTGTCCTCCTCTATGGCTACTCAATGGGGGTCGAACTTTCCACCGATAATGTGGTTGCCGAATATTTTTACGATAGGTTTGATCTAAAGCTGCACACGGCCGGAATCATCGCTGCAACATTTGGGATGGCGAATCTAGTGGCTCGACCATTCGGAGGGTACGCTTCGGACGTCGCAGCTCGATACTTCGGGATGAGAGGAAGACTGTGGACTCTATGGATCCTGCAGACATTTGGTGGAGTGTTCTGCATGTGGCTTGGGAAAGCAAACAAACTTCCAACAGCCATAGTGGCAATGATCTTGTTCTCAATAGGAGCTCAAGCCGCATGTGGAGCCACATTCGGAATCATTCCCTTCATTTCTAGGCGGTCTTTAGGGATAATATCAGGACTAACAGGCGCAGGAGGCAACTTTGGATCTGGTCTGACTCAGTTGGTGTTCTTCTCAACCTCCAAATTCACCACGGACAAAGGGTTGTTCTTGATGGGAGTAATGATCGTGTGTTGCACTCTTCCAGTCACTTTGGTTCACTTCCCTCAATGGGGCAGCATGTTCTTACCACCAACAAAACACGTTGAGAAATCTACAGAAGAATTCTACTATGGATCTGAATGGACTGAGGATGAAAAGAAGAAGGGTTTGCACCAACAAAGCATCAAGTTTGCTGAGAACAGCAGGTCTGAACGTGGCAGGCGTGTGGCCTCAGCTCCAACTCCGCCAAACAACACTCCTTCTCATGTTTGA 1605 49.47 MGSNNNNIEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKVDIGNAGVTSVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVSSAGGYIAVRFMIGFSLATFVSCQYWMSTMFNSQIIGLVNGTAAGWGNMGGGATQLIMPLLYDVIKRAGATPFTAWRIAFFIPGWLHIIMGILVLTLGQDLPDGNLSSLQKKGNVAKDKFSNVLWYAVTNYRTWIFVLLYGYSMGVELSTDNVVAEYFYDRFDLKLHTAGIIAATFGMANLVARPFGGYASDVAARYFGMRGRLWTLWILQTFGGVFCMWLGKANKLPTAIVAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSKFTTDKGLFLMGVMIVCCTLPVTLVHFPQWGSMFLPPTKHVEKSTEEFYYGSEWTEDEKKKGLHQQSIKFAENSRSERGRRVASAPTPPNNTPSHV 534
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 41898927 41900821 + Lag0022975.1 Lac7g2458 615359
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2458 534 FunFam Nitrate transporter 2.1 269 470 - -
Lac7g2458 534 Pfam Major Facilitator Superfamily 73 429 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Lac7g2458 534 MobiDBLite consensus disorder prediction 499 517 - -
Lac7g2458 534 SUPERFAMILY MFS general substrate transporter 63 466 IPR036259 -
Lac7g2458 534 Gene3D MFS general substrate transporter like domains 268 470 IPR036259 -
Lac7g2458 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 68 462 IPR020846 GO:0022857(InterPro)
Lac7g2458 534 MobiDBLite consensus disorder prediction 499 534 - -
Lac7g2458 534 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 11 519 IPR044772 GO:0005886(PANTHER)|GO:0015112(PANTHER)|GO:0015112(InterPro)|GO:0015706(PANTHER)|GO:0071249(PANTHER)
Lac7g2458 534 FunFam High affinity nitrate transporter 61 258 - -
Lac7g2458 534 CDD MFS_NRT2_like 69 462 IPR044772 GO:0015112(InterPro)
Lac7g2458 534 Gene3D MFS general substrate transporter like domains 62 258 IPR036259 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0178 Lac-Chr13:1255768 Lac7g2458 Lac-Chr7:41898927 4.10E-172 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2458 K02575 - csv:101218244 1035.02