Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g2458 | ATGGGTAGCAATAATAATAACATTGAGGGGTCTCCAGGGAGCTCAATGCATGGAGTGACAGGCAGAGAGCAGACGTTTGCGTTCTCTGTGGCTTCCCCAATCGTCCCAACGGATACCACTGCTAAATTCGCTCTCCCAGTGGACTCTGAGCACAAGGCGAAGGTGTTCAAGCTGTTCTCTTTGGCGAACCCACACATGAGAACCTTTCACCTCTCATGGATCTCCTTCTTCACTTGCTTTGTTTCAACCTTCGCTGCAGCCCCTCTGGTCCCTATCATTCGGGACAACCTTAACCTCACCAAAGTCGACATTGGCAACGCTGGAGTCACCTCTGTCTCTGGCAGCATTTTCTCTCGTCTTGTCATGGGCGCTGTCTGTGACCTTCTCGGCCCTCGCTACGGCTGCGCCTTTCTCATCATGCTCTCCGCTCCCACTGTCTTCTGCATGTCCTTTGTCTCCTCTGCTGGTGGCTACATAGCCGTCAGGTTCATGATTGGATTCTCTCTTGCCACCTTCGTCTCCTGCCAGTATTGGATGAGCACCATGTTCAACAGCCAGATCATTGGCCTTGTCAATGGCACTGCTGCTGGCTGGGGCAACATGGGTGGAGGAGCCACTCAGCTCATCATGCCTTTGCTTTATGATGTTATCAAGAGAGCCGGTGCCACTCCCTTCACTGCTTGGAGGATTGCCTTCTTCATCCCTGGCTGGCTTCATATCATTATGGGCATTTTGGTTTTGACTCTTGGCCAGGATTTGCCTGATGGGAATCTCAGTAGCCTTCAGAAGAAGGGTAATGTTGCCAAAGATAAATTCTCCAATGTGCTATGGTATGCTGTCACTAATTACAGAACTTGGATCTTTGTCCTCCTCTATGGCTACTCAATGGGGGTCGAACTTTCCACCGATAATGTGGTTGCCGAATATTTTTACGATAGGTTTGATCTAAAGCTGCACACGGCCGGAATCATCGCTGCAACATTTGGGATGGCGAATCTAGTGGCTCGACCATTCGGAGGGTACGCTTCGGACGTCGCAGCTCGATACTTCGGGATGAGAGGAAGACTGTGGACTCTATGGATCCTGCAGACATTTGGTGGAGTGTTCTGCATGTGGCTTGGGAAAGCAAACAAACTTCCAACAGCCATAGTGGCAATGATCTTGTTCTCAATAGGAGCTCAAGCCGCATGTGGAGCCACATTCGGAATCATTCCCTTCATTTCTAGGCGGTCTTTAGGGATAATATCAGGACTAACAGGCGCAGGAGGCAACTTTGGATCTGGTCTGACTCAGTTGGTGTTCTTCTCAACCTCCAAATTCACCACGGACAAAGGGTTGTTCTTGATGGGAGTAATGATCGTGTGTTGCACTCTTCCAGTCACTTTGGTTCACTTCCCTCAATGGGGCAGCATGTTCTTACCACCAACAAAACACGTTGAGAAATCTACAGAAGAATTCTACTATGGATCTGAATGGACTGAGGATGAAAAGAAGAAGGGTTTGCACCAACAAAGCATCAAGTTTGCTGAGAACAGCAGGTCTGAACGTGGCAGGCGTGTGGCCTCAGCTCCAACTCCGCCAAACAACACTCCTTCTCATGTTTGA | 1605 | 49.47 | MGSNNNNIEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKVDIGNAGVTSVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVSSAGGYIAVRFMIGFSLATFVSCQYWMSTMFNSQIIGLVNGTAAGWGNMGGGATQLIMPLLYDVIKRAGATPFTAWRIAFFIPGWLHIIMGILVLTLGQDLPDGNLSSLQKKGNVAKDKFSNVLWYAVTNYRTWIFVLLYGYSMGVELSTDNVVAEYFYDRFDLKLHTAGIIAATFGMANLVARPFGGYASDVAARYFGMRGRLWTLWILQTFGGVFCMWLGKANKLPTAIVAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSKFTTDKGLFLMGVMIVCCTLPVTLVHFPQWGSMFLPPTKHVEKSTEEFYYGSEWTEDEKKKGLHQQSIKFAENSRSERGRRVASAPTPPNNTPSHV | 534 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 41898927 | 41900821 | + | Lag0022975.1 | Lac7g2458 | 615359 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g2458 | 534 | FunFam | Nitrate transporter 2.1 | 269 | 470 | - | - | |
Lac7g2458 | 534 | Pfam | Major Facilitator Superfamily | 73 | 429 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
Lac7g2458 | 534 | MobiDBLite | consensus disorder prediction | 499 | 517 | - | - | |
Lac7g2458 | 534 | SUPERFAMILY | MFS general substrate transporter | 63 | 466 | IPR036259 | - | |
Lac7g2458 | 534 | Gene3D | MFS general substrate transporter like domains | 268 | 470 | IPR036259 | - | |
Lac7g2458 | 534 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 68 | 462 | IPR020846 | GO:0022857(InterPro) | |
Lac7g2458 | 534 | MobiDBLite | consensus disorder prediction | 499 | 534 | - | - | |
Lac7g2458 | 534 | PANTHER | HIGH-AFFINITY NITRATE TRANSPORTER 2.3 | 11 | 519 | IPR044772 | GO:0005886(PANTHER)|GO:0015112(PANTHER)|GO:0015112(InterPro)|GO:0015706(PANTHER)|GO:0071249(PANTHER) | |
Lac7g2458 | 534 | FunFam | High affinity nitrate transporter | 61 | 258 | - | - | |
Lac7g2458 | 534 | CDD | MFS_NRT2_like | 69 | 462 | IPR044772 | GO:0015112(InterPro) | |
Lac7g2458 | 534 | Gene3D | MFS general substrate transporter like domains | 62 | 258 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac13g0178 | Lac-Chr13:1255768 | Lac7g2458 | Lac-Chr7:41898927 | 4.10E-172 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac7g2458 | K02575 | - | csv:101218244 | 1035.02 |