Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2487 ATGGCCAACGACAATGGAGCAGACATTTGGGGTTTCATCGAACAAGTAGTGAAAGGCCGATGGTTTGCGGTATTCGCCTCGTTTTTTATGATGATCGGTAACGGTTCAACTTACATATTTGGAACGTACTCCAAAGTTATAAAGACCCAATTCGATTACAATCAAACCCAAGTTAACACATTGGGATTCGCCAAAGATCTCGGCTCCAACATCGGAGTTTTCGCCGGCCTTCTCGCCGAGGTGGCTCCACCGTGGGTTCAATTCCTTATCGGCGCAGCTCTCAACTTTTCCGGTTACTTCATGATTTGGCTGTCCATCACTCGCCGCATCGCCAAGCCCAAATTCTGGCAAATGTTCCTTTACATTTGTGTCGGCAGTAATTCATCAAATTTCGCCAACACCGCCATTATGGTCACAGGCGTTAGAAACTTCCCCGACCGACGAGGCATTATTTTGGGCCTTCTTAAAGGCTTTGTTGGCATTGGCGGTGCCATCATAACCCAATTTCACTTAGCCATTTACGGCCACGATGACCCATCAGATATACTTCTTATTTGCGCTTGGCTTCCCACAATCGTAATCCTCCTCCTTTTCCTCTCAGTTCGACCTATCAATATCCGTAAACATCCCGAAGAGCTCAAAGTCTTTTACCATTTACTTTACGTCTCCATAGTTCTGGCGCTTTTCATCTTGTTTTTGACCATAACTCAAAAACAAGTCACTTTCTCTCACGCGGGATACGTTAGTGGCGCATCCGTCATCCTTGGCTTGCTATGCCTACCCCTTCTGATCGCAGTTCGAGAAGAGCTCTTGCTCTACAAACTCAACAAACAAAACCACGGTCCATTTGTCACTGTTCCCATTGCTGAGCCAAAGCCTCCGTCGCAAAGACATGGCTCTTATTTGTTTAGCTACTTTTCTGGATGTGGGTCATCTCTTGCGGCCATTGATAACTTAGGCCAAATTGGCGAATCACTTGGCTATCCACCACAAGCCATAAGCACCTTCGTTTCTTGGGTTTCCGTCTTCAACTTCTTCGGCCGTGTCTTCTCTGGTTTCATCTCTGAGACCATGATGATCAAATACAAATTACCTCGTCCACTCATTTTTGCTTTTGCCTTTCTCATCACTTGCATTGGCCAGCTCTGCATCGCCTTTCCATCTCCGGGTTCGGTCTACCTAGCTTCGTTGATTATTGGGTTCGGGTTCGGAGCTCAAGTTCCATTGCTGTTCGCCATAATCTCCGAGCTTTTTGGGCTCAAACATTACTCGACGTTGTTCAATTGTGGGCAATTGGTAGTCCCATTAGGGTCTTACATACTGAACGTGGATGTAGTGGGGAAGTTGTATGACGTGGAAGCTTTACGTGAAGGAACGAAGACGATGGGCACGGGGATAACTTGCACTGGAGCTCATTGCTTCAGTGGGTCGTTCACAATTTTGGCTACGGTCACAATGTTCGGAGCTGTGATTATGCTCGTGTTGGCTTATAGGACTCGGGAATTTTACAAAGAGGATGTATATAAGAAATACAGAGAGGAATTGTGGATTCCTCCATCAGAAATGGAGTTCTATCGCTTAGATACTAAGAAGAAAGTGACTAAATTCCGAACCTGA 1617 45.95 MANDNGADIWGFIEQVVKGRWFAVFASFFMMIGNGSTYIFGTYSKVIKTQFDYNQTQVNTLGFAKDLGSNIGVFAGLLAEVAPPWVQFLIGAALNFSGYFMIWLSITRRIAKPKFWQMFLYICVGSNSSNFANTAIMVTGVRNFPDRRGIILGLLKGFVGIGGAIITQFHLAIYGHDDPSDILLICAWLPTIVILLLFLSVRPINIRKHPEELKVFYHLLYVSIVLALFILFLTITQKQVTFSHAGYVSGASVILGLLCLPLLIAVREELLLYKLNKQNHGPFVTVPIAEPKPPSQRHGSYLFSYFSGCGSSLAAIDNLGQIGESLGYPPQAISTFVSWVSVFNFFGRVFSGFISETMMIKYKLPRPLIFAFAFLITCIGQLCIAFPSPGSVYLASLIIGFGFGAQVPLLFAIISELFGLKHYSTLFNCGQLVVPLGSYILNVDVVGKLYDVEALREGTKTMGTGITCTGAHCFSGSFTILATVTMFGAVIMLVLAYRTREFYKEDVYKKYREELWIPPSEMEFYRLDTKKKVTKFRT 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 42586346 42588089 + Lag0023004.1 Lac7g2487 615388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2487 538 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 511 - GO:0016020(PANTHER)
Lac7g2487 538 SUPERFAMILY MFS general substrate transporter 20 506 IPR036259 -
Lac7g2487 538 Pfam Nodulin-like 20 265 IPR010658 -
Lac7g2487 538 CDD MFS_Mch1p_like 19 489 - -
Lac7g2487 538 Gene3D MFS general substrate transporter like domains 299 505 IPR036259 -
Lac7g2487 538 Gene3D MFS general substrate transporter like domains 17 279 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g2476 Lac-Chr7:42261740 Lac7g2487 Lac-Chr7:42586346 8.00E-215 dispersed
Lac7g2487 Lac-Chr7:42586346 Lac7g2498 Lac-Chr7:42929371 5.50E-146 dispersed
Lac7g2487 Lac-Chr7:42586346 Lac10g2988 Lac-Chr10:44461487 2.30E-136 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2487 - - - 0.0