Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g2509 | ATGTTACTTCGTGCTCCACCTTCACCTTCTTCTTCTCCTTTTCACGCATCTCCTCCTCCCTTTGAGAAGCTCATTGTCGCCACCGTCTCTCTCCGTTCAGTGCAGCCGCCGCCGTCTTTCTTCCGCTCGTGCCGCCACATCCTCCCTCCTAGGGGGTTTTCACTGATTTTCTACTCTCTTGTTGTTACTGGAATCATGGAGGACGAAGTTCAAAATGATGTGATTGATCAGGTGGCAGATATTGCCCCCTTTGATCCAACTAAGAAGAAGAAGAAGAAGAAGGTTGTACTTCAGGATCCGGCCGATGAGTCTATTGACAAGTTAGCAGAGAAAACTGAAAATTTGTCTGTTTCTGATGGTTTGGAGACGACCACATTTTCTGGACTTAAAAAGAAGAAAAAGAAACCAGTAGAGGCTAGCTCCTTGAATGATGATGGTGCTGATGCCATGGAGGATTTGGATGATCAAGCGGGAGAGAATGAAGAACGGGAGGGAATTGTTCTACAATATCGTTATCCTTGGGAGGGAAGTGATCGCGATTATGAATATGAGGAGCTTCTTGGACGGGTGTTCAACATTCTTAGAGAGAATAATCCAGAGCTAGCAGGCGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCATCGACAGCCAGACCATGTTATGGCTTTCTTATTGGCCGAACTGGGAACCAGCGGGTCTCTTGATGGACAGCAGAGATTAGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTACGTCGATATGTCAACGAATATGTGATTTGTATTGGGTGCAAGAGTCCAGACACTATCCTTTCCAAGGAGAATCGACTCTTCTTTCTCAGATGCGAAAAGTGTGGTTCTGGACGATCGGTTGCTCCAATTAAAGCTGGTTTTGTTGCTCGTGTTGGCCGGAGGAACGCCGGGACGTGA | 1008 | 45.73 | MLLRAPPSPSSSPFHASPPPFEKLIVATVSLRSVQPPPSFFRSCRHILPPRGFSLIFYSLVVTGIMEDEVQNDVIDQVADIAPFDPTKKKKKKKVVLQDPADESIDKLAEKTENLSVSDGLETTTFSGLKKKKKKPVEASSLNDDGADAMEDLDDQAGENEEREGIVLQYRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 43038372 | 43067343 | + | Lag0023026.1 | Lac7g2509 | 615410 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g2509 | 335 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 180 | 287 | IPR016189 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Lac7g2509 | 335 | FunFam | Eukaryotic translation initiation factor 2 subunit | 178 | 320 | - | - | |
Lac7g2509 | 335 | SMART | eIF2Bneu4 | 205 | 314 | IPR002735 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Lac7g2509 | 335 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 92 | 322 | IPR045196 | GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER) | |
Lac7g2509 | 335 | Pfam | Domain found in IF2B/IF5 | 204 | 313 | IPR002735 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Lac7g2509 | 335 | MobiDBLite | consensus disorder prediction | 128 | 151 | - | - | |
Lac7g2509 | 335 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 284 | 319 | IPR016190 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Lac7g2509 | 335 | Gene3D | - | 178 | 320 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac2g2858 | Lac-Chr2:44928379 | Lac7g2509 | Lac-Chr7:43038372 | 5.00E-09 | dispersed | |
Lac7g2509 | Lac-Chr7:43038372 | Lac7g2919 | Lac-Chr7:48208474 | 9.30E-144 | dispersed | |
Lac7g2509 | Lac-Chr7:43038372 | Lac2g3096 | Lac-Chr2:49076636 | 4.80E-07 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac7g2509 | K03238 | - | csv:101220978 | 503.827 |