Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2556 ATGGCGGCCGCAGGCAGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCGGTCGCCGTCGTTTGCTTCGTTTTGCTTCTCATATCCATCGTCATCGAATTCGGTATCCACCTCATCGGAAAGTGGTTTAAGAAGAGACACAAACGGGCCTTGTTCGAAGCACTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCACTGCTTCTGACAGTGGGGCAAGGTCCAATCTCAGATATCTGCATCCCCGAACACGTGGCAGCCACGTGGCATCCATGTAGGAAAGAGAAAGAAATGGAGATGAACAAAGAGATGGAAAAATCAGTGGAACATTGGGATACTAATGGCCGGAGACTCCTCGACCTCGCCGGAAATGGTGGAATTTTCCGGCGAAAGTTGGCCCCGGCCGGAGGAGCCGACAAGTGTGCCGCCAAGGGTCAAGTGTCATTTATTTCTGCAGAAGGAATTCATCAACTTCATATCTTCATCTTTGTGTTGGCTGTTTTCCATGTTCTCTACTGTGTTCTAACTTATGCTTTTGCTAGAGCAAAGATGAGGAGTTGGAAAACCTGGGAAAGGGAAACCAAAACCGCAGAATACCAATTCTCACACGATCCTGAGAGATTCAGATTTGCAAGAGACACTTCGTTTGGGAGAAGACATTTGAGTTTCTGGACCAAGAATCCGGTTCTTATGTGGATAGTTTGTTTCTTCAGGCAGTTTGTAAGATCAGTTCCAAAAGTTGATTATTTGACATTGAGACATGGATTTATAATGGCACATTTGGCACCTCAAAGCCACACGCAATTTGACTTCCAAAAATATATTAATCGCTCCCTTGAAGAGGACTTCAAAGTTGTTGTAGGAATCAGCCCACCAATATGGTTCTTCGCTGTGCTGTTTCTCCTCTCAAACACTCACGGTTGGAGGGCATATCTATGGCTGCCATTCATCCCACTGATCATTCTGCTGCTGATAGGGACGAAGTTGCAGGTGATAATAACGAAGATGGCGCTGAGAATACAGGAGAGAGGGGAAGTGGTGAAGGGAGTGCCGGTGGTGGAGCCTGGCGATGACCTTTTCTGGTTCAATCGCCCTCGCCTTGTTCTTTATCTCATCAACTTTGTTCTCTTTCAAAATGCCTTTCAAGTTGCCTTCTTTGCTTGGACTTGGTATGAGTTTGGGTTGAGTTCTTGCTTCCATGAGCATATAGAGGATGTGGTGATCAGAATCTCAATGGGGGTGATTGTACAAATCCTTTGCAGTTATGTTACTCTACCTCTTTATGCACTGGTTACTCAGATGGGTTCAACAATGAAGCCAACCATATTCAATGAGAGGGTGGCAGCAGCCCTTCGCAATTGGTACCATTCGGCTCGGAAGCACATCAAGCACAACCGCGGTTCGATCACCCCGATGTCGAGCCGACCCACCACTCCGACTCACCACATGTCACCGGTCCACCTTCTCCGCCATTACAAGAGTGAACTCGATAGCTTCCACACATCTCCAAGAAGGTCGACACTCGACAATGATCGTTGGGACAACGATTCGCCCTCCCCTTCTCGTCATGCTGATGGTTCGTCTACGTCACAACCCCACATCGAGATGGGAGCCTATGACAGAGATTCAACTGAACCGGGTTCGGTTCAAATTGACCCGGTTCAGCAGCCACGAACCCGCACTCAACATACGATTGATATTGGCACCAAAGACTTTTCCTTTGATAGAGTTGAATGA 1746 47.48 MAAAGSGKSLEQTPTWAVAVVCFVLLLISIVIEFGIHLIGKWFKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPISDICIPEHVAATWHPCRKEKEMEMNKEMEKSVEHWDTNGRRLLDLAGNGGIFRRKLAPAGGADKCAAKGQVSFISAEGIHQLHIFIFVLAVFHVLYCVLTYAFARAKMRSWKTWERETKTAEYQFSHDPERFRFARDTSFGRRHLSFWTKNPVLMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLSNTHGWRAYLWLPFIPLIILLLIGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLVLYLINFVLFQNAFQVAFFAWTWYEFGLSSCFHEHIEDVVIRISMGVIVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAAALRNWYHSARKHIKHNRGSITPMSSRPTTPTHHMSPVHLLRHYKSELDSFHTSPRRSTLDNDRWDNDSPSPSRHADGSSTSQPHIEMGAYDRDSTEPGSVQIDPVQQPRTRTQHTIDIGTKDFSFDRVE 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 43781979 43789450 + Lag0023073.1 Lac7g2556 615457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2556 581 MobiDBLite consensus disorder prediction 551 571 - -
Lac7g2556 581 Pfam Mlo family 8 495 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac7g2556 581 MobiDBLite consensus disorder prediction 502 522 - -
Lac7g2556 581 MobiDBLite consensus disorder prediction 523 537 - -
Lac7g2556 581 PANTHER MLO-LIKE PROTEIN 1 4 529 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac7g2556 581 MobiDBLite consensus disorder prediction 502 581 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g1923 Lac-Chr12:35968021 Lac7g2556 Lac-Chr7:43781979 1.80E-82 dispersed
Lac13g0722 Lac-Chr13:5563906 Lac7g2556 Lac-Chr7:43781979 7.20E-189 dispersed
Lac7g2556 Lac-Chr7:43781979 Lac9g2570 Lac-Chr9:44311303 3.40E-250 dispersed
Lac7g2551 Lac-Chr7:43702577 Lac7g2556 Lac-Chr7:43781979 6.10E-135 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2556 K08472 - csv:101217225 1035.4