Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2600 ATGCAACTAATTCCGCAGCTCTGTTTTTGGAGCTCAGAAACAGAGGGAGTGGTGAAGGAGGAACTCGAATTTGTAATGGGTTGCTTTCGTTGCACCGGTTCATCGAGCAAGAAATCGGAGAATATCGAAGAAAACCATCCCAATACCTTCAATTCCAAAACCCAGAAGCCCGATGATCGAAAGTTTTCAGATAAAGCCAAAATAATTTCAAGTTTGGCCTTGAAGAAGGATTCTGATGTGAAGGTGGTTGTGTCTAAAAATGACCAATTGTCTTTAGATGTAAAGAAATTGAATTTGAAAGATGAGGTTTCTAAAGAAGGAGAAACCAATAACCGTGCCAAGACTTTTATATTTCAAGAACTTGCCGCGGCGACGGGCAATTTCAGGTCAGATTGCTTCTTGGGTGAAGGAGGATTTGGAAAAGTTTACAAGGGATATTTGCAGCAAGTTAATGAGGTTGTAGCAATCAAACAACTTGACCGCAATGGACTTCAAGGAATTCGGGAGTTCGTTGTGGAAGTCTTGACTTTAAGTCTAGCTGATCACCCTAACCTTGTAAAACTCATTGGATTTTGTGCTGAAGGGGATCAGAGGCTGTTGGTTTATGAATACATGCCATTGGGATCGTTGGAAAATCATTTACATGATCTTCGACCCGGTGCAAAAGTAATTGATTGGAACACAAGAATGAAAATAGCAGCAGGTGCTGCAAGGGGTTTGGAGTATTTGCATGAACAGATGAAGCCCCCAGTTATATATCGTGATCTGAAATGCTCAAACATTTTGCTTGGTGAAGGGTATCATCCAAAGCTATCTGATTTTGGATTAGCTAAAGTAGGTCCCAGTGGGGATAAAACCCATGTTTCAACCAGGGTTATGGGCACATATGGTTACTGTGCGCCTGATTATGCAATGACGGGCCAGCTTACATTCAAATCCGATATTTATAGCTTTGGCGTTGTTTTGTTGGAACTCATCACTGGCAGAAAAGCAATTGATCATTCAAAACCTCATTCGGAGCAAAATCTTGTGGCTTGGGCACGACCCTTGTTCAGAGACCGAAAGAAGTTCTCACAAATGATTGACCCGGTGCTCCAAGGACAGTATCCCATGAGAGGATTATACCAATCTCTGGCCATTGCTGCAATGTGTGTTCAGGAGCAACCGAACATGCGGCCAGTTATATCTGATGTGGTTACCGCTCTAAACTACCTAGCATCCCAGAAATATGATCCCCAAACTCAACCAAACCAGAGCTCCCAAAAGAGACCATCTCCTAAACAGGAACAGGGCGATGACAAGAGGGAAACTTCAGACAACGGGTCGGAGAGAGTGAGGCGGGAGGGTGTCTCTGAAAACTCCTCTGTAAAATGTGGTAAGGTGAAACTTTCATTGTGCAATGTTCTTATGGAGGATGTGGAGCTTGTTTATGTGAATTGTACCTTGCTTATTTATGACCAGAATGCCCGAAAATCTAGTTTGAGCCCACTCGGGCTGGACCAGGAAGAGAAGCGAAGATTGAGAAAAGGCTCATTGCTGGCCCGAGCCTCTGGGAAGGATCTTGCTAGGCCTAGAGGAGCTTCAATCACCAAGCTGGGGATCGCTGATGGGCAATTCAGGTCACGTCTTTTCCATCTTCAACAAATTCATTGTTGGTGTCATGTGAAAGTCAGGAAATATGCAATAGCACTAGGAAACTCGATTGGATCCTCTAAGAAGAGGAACCAAGTTAAAAGTGGACTCAATGGTAGAGAAGAAGTTTGGATCCCGATTACTATAGAAAAACTGTCGGACTTCTGTTATCAGTGTGGGAGATTGGACCATGTTATGAAAGAGTGTGAGGAAGACGACGATGAAGAAGAGGAAGAAGAGAGAAATCAATACGAGCCAGTCAAAAGAACATTCGGTCTTAAAACTGAAATCAAAGGAAAAAAGGAATTGGAGAAGAGGAAAATAAAAATAAAGAGCTAG 1971 42.97 MQLIPQLCFWSSETEGVVKEELEFVMGCFRCTGSSSKKSENIEENHPNTFNSKTQKPDDRKFSDKAKIISSLALKKDSDVKVVVSKNDQLSLDVKKLNLKDEVSKEGETNNRAKTFIFQELAAATGNFRSDCFLGEGGFGKVYKGYLQQVNEVVAIKQLDRNGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPLGSLENHLHDLRPGAKVIDWNTRMKIAAGAARGLEYLHEQMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHSKPHSEQNLVAWARPLFRDRKKFSQMIDPVLQGQYPMRGLYQSLAIAAMCVQEQPNMRPVISDVVTALNYLASQKYDPQTQPNQSSQKRPSPKQEQGDDKRETSDNGSERVRREGVSENSSVKCGKVKLSLCNVLMEDVELVYVNCTLLIYDQNARKSSLSPLGLDQEEKRRLRKGSLLARASGKDLARPRGASITKLGIADGQFRSRLFHLQQIHCWCHVKVRKYAIALGNSIGSSKKRNQVKSGLNGREEVWIPITIEKLSDFCYQCGRLDHVMKECEEDDDEEEEEERNQYEPVKRTFGLKTEIKGKKELEKRKIKIKS 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 44399152 44406245 - Lag0023117.1 Lac7g2600 615501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2600 656 Gene3D Transferase(Phosphotransferase) domain 1 205 429 - -
Lac7g2600 656 Pfam Zinc knuckle 582 614 IPR025836 -
Lac7g2600 656 PANTHER OS07G0668900 PROTEIN 80 430 - -
Lac7g2600 656 FunFam Serine/threonine-protein kinase PBS1 205 421 - -
Lac7g2600 656 ProSiteProfiles Protein kinase domain profile. 128 405 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g2600 656 MobiDBLite consensus disorder prediction 409 425 - -
Lac7g2600 656 FunFam probable serine/threonine-protein kinase RLCKVII 100 204 - -
Lac7g2600 656 Pfam Protein kinase domain 133 345 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g2600 656 MobiDBLite consensus disorder prediction 426 451 - -
Lac7g2600 656 Gene3D Phosphorylase Kinase; domain 1 88 204 - -
Lac7g2600 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g2600 656 CDD STKc_IRAK 134 403 - -
Lac7g2600 656 SUPERFAMILY Protein kinase-like (PK-like) 114 422 IPR011009 -
Lac7g2600 656 SMART serkin_6 128 405 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g2600 656 ProSitePatterns Protein kinases ATP-binding region signature. 134 157 IPR017441 GO:0005524(InterPro)
Lac7g2600 656 MobiDBLite consensus disorder prediction 409 451 - -
Lac7g2600 656 ProSiteProfiles Zinc finger CCHC-type profile. 600 615 IPR001878 GO:0003676(InterPro)|GO:0008270(InterPro)
Lac7g2600 656 Coils Coil 606 626 - -
Lac7g2600 656 MobiDBLite consensus disorder prediction 34 59 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g3058 Lac-Chr10:45061822 Lac7g2600 Lac-Chr7:44399152 2.20E-144 dispersed
Lac7g0849 Lac-Chr7:6877120 Lac7g2600 Lac-Chr7:44399152 4.20E-141 dispersed
Lac7g2600 Lac-Chr7:44399152 Lac9g2536 Lac-Chr9:44009260 4.50E-150 dispersed
Lac13g0875 Lac-Chr13:7117690 Lac7g2600 Lac-Chr7:44399152 1.10E-49 transposed
Lac3g2607 Lac-Chr3:39996838 Lac7g2600 Lac-Chr7:44399152 1.40E-72 wgd
Lac4g0293 Lac-Chr4:6615038 Lac7g2600 Lac-Chr7:44399152 2.70E-59 wgd
Lac7g2600 Lac-Chr7:44399152 Lac9g2597 Lac-Chr9:44494276 2.20E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86343 PF00069 Pkinase 1.50E-43 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2600 - - - 0.0