Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2604 ATGGAGAACGATTCTTCGCCTATGGAGATCAAGGGGCTTCCCACCTTCGACGGCAAATACTTGCTCTACAATGTTCTCGGCAACTTCTTCGAGGTCTCTGCCAAGTACGCCCCTTCGATTCAACCTGTTGGACGCGGTGCTTACGGCATTGTTTGTTGTACGACGAATTTGGAGACGAAAGATGAGGTAGCGATAAAGAAGATAGGGAATGCTTTTGATAACAGGATTGATGCCAAGAGGACCCTTCGTGAGATTAAACTTCTATGCCATATGGACCATGACAATATTATAAAAATCAAAGATATAATTCCTCCACCAGAGAAGGAAAAATTCAATGATGTGTATATTGTGTATGAACTAATGGACACTGATCTGCATCAGATCATTCGCTCTACCCAGGCTCTGACCGATGATCACTGTCAGTACTTCCTATACCAGTTACTGCGAGGTTTGAAATATTTACACTCTGCAAATGTCTTGCACCGAGATCTAAAACCAAGCAACCTGCTTCTCAATGCAAACTGCGACCTGAAGATTTGTGACTTTGGCTTAGCAAGAACAACATCAGAGACAGATTTCATGACAGAATATGTTGTAACCCGATGGTATCGAGCCCCTGAGCTACTACTTAACACTTCTGAATACACTGCAGCGATAGATATTTGGTCTGTTGGATGTATTCTCATGGAAATTCTAAGGAGGGAGCCTCTCTTCCCTGGTAAAGACTATGTGCAGCAATTGGGGCTTATAACCGAGTTGCTAGGTTCACCAGATGATTCAGATCTTGGGTTTCTCAGAAGTGATAATGCAAAGAAGTATGTTAAGCAACTTCCTCATTTCCCAAAACAACCGCTGATCGAAAAGTTCCCAGATCTTCCTCCACTGGCAGTTGATCTTGCAGAGAGGATGCTGCTCTTTGATCCGATCAAGAGAATAACTGTCGAGGAGGCAATGAATCACCCATATATAGTAAGTCTTCATGAAATCAATGAAGAACCAACCTGCCCTTCTCCTTTCAACTTTGATTTCGAACAGGCATCCTTGGATGAAGAAGATATAAAAGAGCTTATATGGAAAGAGTCTCTCAAGTTCAATCCTAATCACATGTAG 1110 42.43 MENDSSPMEIKGLPTFDGKYLLYNVLGNFFEVSAKYAPSIQPVGRGAYGIVCCTTNLETKDEVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNIIKIKDIIPPPEKEKFNDVYIVYELMDTDLHQIIRSTQALTDDHCQYFLYQLLRGLKYLHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNTSEYTAAIDIWSVGCILMEILRREPLFPGKDYVQQLGLITELLGSPDDSDLGFLRSDNAKKYVKQLPHFPKQPLIEKFPDLPPLAVDLAERMLLFDPIKRITVEEAMNHPYIVSLHEINEEPTCPSPFNFDFEQASLDEEDIKELIWKESLKFNPNHM 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 44458702 44460863 - Lag0023121.1 Lac7g2604 615505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2604 369 FunFam Mitogen-activated protein kinase 22 131 - -
Lac7g2604 369 Pfam Protein kinase domain 41 323 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g2604 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g2604 369 Gene3D Transferase(Phosphotransferase) domain 1 121 350 - -
Lac7g2604 369 SUPERFAMILY Protein kinase-like (PK-like) 40 329 IPR011009 -
Lac7g2604 369 SMART serkin_6 40 323 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g2604 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 30 360 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Lac7g2604 369 ProSitePatterns Protein kinases ATP-binding region signature. 43 67 IPR017441 GO:0005524(InterPro)
Lac7g2604 369 FunFam Mitogen-activated protein kinase 121 350 - -
Lac7g2604 369 ProSiteProfiles Protein kinase domain profile. 37 323 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g2604 369 ProSitePatterns MAP kinase signature. 72 175 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g2604 369 Gene3D Phosphorylase Kinase; domain 1 20 360 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2057 Lac-Chr11:36366671 Lac7g2604 Lac-Chr7:44458702 1.40E-167 dispersed
Lac6g0769 Lac-Chr6:6538774 Lac7g2604 Lac-Chr7:44458702 5.50E-155 dispersed
Lac7g2604 Lac-Chr7:44458702 Lac7g2614 Lac-Chr7:44676305 3.60E-149 dispersed
Lac12g1654 Lac-Chr12:31883864 Lac7g2604 Lac-Chr7:44458702 9.20E-169 wgd
Lac13g1491 Lac-Chr13:15018366 Lac7g2604 Lac-Chr7:44458702 5.70E-90 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86344 PF00069 Pkinase 1.20E-68 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2604 K04371 - csv:101218403 717.227