Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac7g2604 | ATGGAGAACGATTCTTCGCCTATGGAGATCAAGGGGCTTCCCACCTTCGACGGCAAATACTTGCTCTACAATGTTCTCGGCAACTTCTTCGAGGTCTCTGCCAAGTACGCCCCTTCGATTCAACCTGTTGGACGCGGTGCTTACGGCATTGTTTGTTGTACGACGAATTTGGAGACGAAAGATGAGGTAGCGATAAAGAAGATAGGGAATGCTTTTGATAACAGGATTGATGCCAAGAGGACCCTTCGTGAGATTAAACTTCTATGCCATATGGACCATGACAATATTATAAAAATCAAAGATATAATTCCTCCACCAGAGAAGGAAAAATTCAATGATGTGTATATTGTGTATGAACTAATGGACACTGATCTGCATCAGATCATTCGCTCTACCCAGGCTCTGACCGATGATCACTGTCAGTACTTCCTATACCAGTTACTGCGAGGTTTGAAATATTTACACTCTGCAAATGTCTTGCACCGAGATCTAAAACCAAGCAACCTGCTTCTCAATGCAAACTGCGACCTGAAGATTTGTGACTTTGGCTTAGCAAGAACAACATCAGAGACAGATTTCATGACAGAATATGTTGTAACCCGATGGTATCGAGCCCCTGAGCTACTACTTAACACTTCTGAATACACTGCAGCGATAGATATTTGGTCTGTTGGATGTATTCTCATGGAAATTCTAAGGAGGGAGCCTCTCTTCCCTGGTAAAGACTATGTGCAGCAATTGGGGCTTATAACCGAGTTGCTAGGTTCACCAGATGATTCAGATCTTGGGTTTCTCAGAAGTGATAATGCAAAGAAGTATGTTAAGCAACTTCCTCATTTCCCAAAACAACCGCTGATCGAAAAGTTCCCAGATCTTCCTCCACTGGCAGTTGATCTTGCAGAGAGGATGCTGCTCTTTGATCCGATCAAGAGAATAACTGTCGAGGAGGCAATGAATCACCCATATATAGTAAGTCTTCATGAAATCAATGAAGAACCAACCTGCCCTTCTCCTTTCAACTTTGATTTCGAACAGGCATCCTTGGATGAAGAAGATATAAAAGAGCTTATATGGAAAGAGTCTCTCAAGTTCAATCCTAATCACATGTAG | 1110 | 42.43 | MENDSSPMEIKGLPTFDGKYLLYNVLGNFFEVSAKYAPSIQPVGRGAYGIVCCTTNLETKDEVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNIIKIKDIIPPPEKEKFNDVYIVYELMDTDLHQIIRSTQALTDDHCQYFLYQLLRGLKYLHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNTSEYTAAIDIWSVGCILMEILRREPLFPGKDYVQQLGLITELLGSPDDSDLGFLRSDNAKKYVKQLPHFPKQPLIEKFPDLPPLAVDLAERMLLFDPIKRITVEEAMNHPYIVSLHEINEEPTCPSPFNFDFEQASLDEEDIKELIWKESLKFNPNHM | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 44458702 | 44460863 | - | Lag0023121.1 | Lac7g2604 | 615505 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac7g2604 | 369 | FunFam | Mitogen-activated protein kinase | 22 | 131 | - | - | |
Lac7g2604 | 369 | Pfam | Protein kinase domain | 41 | 323 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac7g2604 | 369 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 159 | 171 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac7g2604 | 369 | Gene3D | Transferase(Phosphotransferase) domain 1 | 121 | 350 | - | - | |
Lac7g2604 | 369 | SUPERFAMILY | Protein kinase-like (PK-like) | 40 | 329 | IPR011009 | - | |
Lac7g2604 | 369 | SMART | serkin_6 | 40 | 323 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac7g2604 | 369 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 30 | 360 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Lac7g2604 | 369 | ProSitePatterns | Protein kinases ATP-binding region signature. | 43 | 67 | IPR017441 | GO:0005524(InterPro) | |
Lac7g2604 | 369 | FunFam | Mitogen-activated protein kinase | 121 | 350 | - | - | |
Lac7g2604 | 369 | ProSiteProfiles | Protein kinase domain profile. | 37 | 323 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac7g2604 | 369 | ProSitePatterns | MAP kinase signature. | 72 | 175 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac7g2604 | 369 | Gene3D | Phosphorylase Kinase; domain 1 | 20 | 360 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g2057 | Lac-Chr11:36366671 | Lac7g2604 | Lac-Chr7:44458702 | 1.40E-167 | dispersed | |
Lac6g0769 | Lac-Chr6:6538774 | Lac7g2604 | Lac-Chr7:44458702 | 5.50E-155 | dispersed | |
Lac7g2604 | Lac-Chr7:44458702 | Lac7g2614 | Lac-Chr7:44676305 | 3.60E-149 | dispersed | |
Lac12g1654 | Lac-Chr12:31883864 | Lac7g2604 | Lac-Chr7:44458702 | 9.20E-169 | wgd | |
Lac13g1491 | Lac-Chr13:15018366 | Lac7g2604 | Lac-Chr7:44458702 | 5.70E-90 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
86344 | PF00069 | Pkinase | 1.20E-68 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac7g2604 | K04371 | - | csv:101218403 | 717.227 |