Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2614 ATGGCTGATGTTGGTCAGAACAACACCGCTGATTTTCCCGCTCTTCCTACCTATGGCGGCCAATACGTGCAGTACAATATCTTCGGGAATCCCTTCGAAATCACCTCAAAATATCGCCCACCCATTATGCCTATAGGTCGCGGCGCCTACGGAATCGTCTGTTCGGTTTTGAATTCGGAGACCAACGAGATGGTTGCGGTTAAGAAGATTGCCAACGCGTTTGATAATCATATGGATGCGAAGCGGACGCTCCGTGAGATTAAGCTTCTCCGGCATTTGGATCACGAAAATGTAATAGGCATAAGAGATGTGATTCCTCCACCTTTACGGAGAGAATTCAATGATGTCTACATTTCCACTGAACTAATGGATACTGATCTTCACCAAATAATCCGCTCCAACCAAACTTTATCAGAAGAGCATTGTCAGTATTTCCTTTATCAGATTCTCAGAGGACTCAAATACATACATTCTGCAAATGTTATTCATCGAGACTTGAAACCGAGCAATCTGTTGCTTAATGCAAACTGTGATCTTAAAATATGTGACTTTGGTCTTGCTCGTCCAACTTCGGAAAATGAATGTATGACAGAATATGTTGTCACAAGATGGTATAGGGCACCTGAGCTTCTATTGAACTCTGATTATACAGCTGCTATAGATATATGGTCTGTTGGTTGCATCTTTCTGGAGCTTATGAACAGAAGGCCTTTATTTCCAGGCAGGGATCATGTGCATCAGATGCGTTTATTAACTGAGCTTCTTGGCACACCAACTGAGTCAGATCTTGGTTTCATTAGGAACGAGGACTCAAAAAGATATCTCCGGCAGCTACCTCCACATCCTCGTCAGCCTTTAGCAACGGTTTTTCCACATGTTCATCCATTGGCAATTGATCTTGTGGATAAGATGTTGACGTTTGACCCAACAAAGAGAATTACAGTTGAACAAGCGTTGGCTCATCCATACCTAGAAAGATTGCATGATGTAGCCGATGAGCCGGTTTGCCCAGAGCCATTCTCGTTCGAGTTTGAGCAACAATTCCTAGATGAGGAGCAAATGAAGGAGATGATTTACAGAGAGGCATTGGCACTCAATCCAGAATTTGCATGA 1113 43.22 MADVGQNNTADFPALPTYGGQYVQYNIFGNPFEITSKYRPPIMPIGRGAYGIVCSVLNSETNEMVAVKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGIRDVIPPPLRREFNDVYISTELMDTDLHQIIRSNQTLSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENECMTEYVVTRWYRAPELLLNSDYTAAIDIWSVGCIFLELMNRRPLFPGRDHVHQMRLLTELLGTPTESDLGFIRNEDSKRYLRQLPPHPRQPLATVFPHVHPLAIDLVDKMLTFDPTKRITVEQALAHPYLERLHDVADEPVCPEPFSFEFEQQFLDEEQMKEMIYREALALNPEFA 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 44676305 44678938 + Lag0023131.1 Lac7g2614 615515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2614 370 FunFam Mitogen-activated protein kinase 123 351 - -
Lac7g2614 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 32 362 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Lac7g2614 370 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524(InterPro)
Lac7g2614 370 Pfam Protein kinase domain 44 324 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g2614 370 CDD STKc_TEY_MAPK 32 367 - -
Lac7g2614 370 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g2614 370 SUPERFAMILY Protein kinase-like (PK-like) 44 332 IPR011009 -
Lac7g2614 370 SMART serkin_6 39 324 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g2614 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac7g2614 370 Gene3D Transferase(Phosphotransferase) domain 1 123 351 - -
Lac7g2614 370 Gene3D Phosphorylase Kinase; domain 1 22 361 - -
Lac7g2614 370 ProSiteProfiles Protein kinase domain profile. 39 324 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac7g2614 370 FunFam Mitogen-activated protein kinase 24 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac6g0444 Lac-Chr6:3627440 Lac7g2614 Lac-Chr7:44676305 1.30E-112 dispersed
Lac7g2604 Lac-Chr7:44458702 Lac7g2614 Lac-Chr7:44676305 3.60E-149 dispersed
Lac7g2614 Lac-Chr7:44676305 Lac9g2254 Lac-Chr9:41888913 1.50E-94 dispersed
Lac7g2614 Lac-Chr7:44676305 Lac6g0769 Lac-Chr6:6538774 6.80E-172 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86345 PF00069 Pkinase 2.50E-74 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2614 K20536 - csv:101202796 726.857