Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac7g2632 | ATGATTCTGGTCCTCCTCTCGAAGCTCGACAGCAAAGCGGAGCTCTACCACGACGCGCCTCTGTCGTACATCTTCTTGGCAAACAACCTCGAGTACATCGTCGTGAAGGTACGAACCTCGAATCTCAGATTCCTTCTAGGAGACGAGTGGATCGAAAGCCACGAGGCGAAGGTGAAGCAGTACGCGTCGAGCTACCAACGGATGGGATGGAGCAGAGTGTTCCTATCGCTGCCGGAGAATCCAACGGCGGAGATCTCGCCGGAGAGAGCAAGAAAACACTTCCACGATTTCAACATCGCATTCGAAGAAGCCTACAGGCATCAAGCCTCGTGGATCGTGACGGATCCGAAGCTGCGCGAGCACATCAAGATCTCGTTGGGGAAGAAACTCGGCACGCTCTACGGTGAGTTCTACATCAAATACCGTTCGCGATTGGAGAATCTTTACGGATTGGATTCAGAGGTGAGATTTGCGCCCGATGATCTGGGGAACTATCTGTCTGATTTGCTTCACGGCGATGGGAATTTGGGAGGGAGTGTTTCGTCGTCGTCATCGTTGTCGACGTCGCCGTATCATTTCCATGGTGGTCGGCGGAGTGGATAA | 603 | 53.07 | MILVLLSKLDSKAELYHDAPLSYIFLANNLEYIVVKVRTSNLRFLLGDEWIESHEAKVKQYASSYQRMGWSRVFLSLPENPTAEISPERARKHFHDFNIAFEEAYRHQASWIVTDPKLREHIKISLGKKLGTLYGEFYIKYRSRLENLYGLDSEVRFAPDDLGNYLSDLLHGDGNLGGSVSSSSSLSTSPYHFHGGRRSG | 200 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 44956576 | 44957178 | + | Lag0023149.1 | Lac7g2632 | 615533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac7g2632 | 200 | Pfam | Exo70 exocyst complex subunit C-terminal | 1 | 168 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
| Lac7g2632 | 200 | SUPERFAMILY | Cullin repeat-like | 1 | 169 | IPR016159 | - | |
| Lac7g2632 | 200 | MobiDBLite | consensus disorder prediction | 181 | 200 | - | - | |
| Lac7g2632 | 200 | Gene3D | Exocyst complex component Exo70 | 1 | 175 | - | - | |
| Lac7g2632 | 200 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 1 | 172 | IPR004140 | GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(PANTHER)|GO:0006887(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac2g3036 | Lac-Chr2:48150287 | Lac7g2632 | Lac-Chr7:44956576 | 3.00E-43 | dispersed | |
| Lac6g1170 | Lac-Chr6:11109151 | Lac7g2632 | Lac-Chr7:44956576 | 4.00E-08 | dispersed | |
| Lac7g2632 | Lac-Chr7:44956576 | Lac9g2512 | Lac-Chr9:43821538 | 2.20E-60 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac7g2632 | K07195 | - | csv:101205924 | 358.992 |