Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2743 ATGGATAATCTCCTCGACGATTTCTCCAATTCATGGAGTAATTTTCACTTCCACCCCCATCTCTCCAATGGGTTGTTCAAAGTCAACCGCGAAATCGTCGATCCCCTTCAGATTCCGGCCAAGCCACAGCAAGATCAGCACCAACTCAGTAACAATTCATCCTCGTCGACGTCGACTTCGCCGTCGCTGTCGCCGTCGAGCTCCGAGGGCGACTCGCCGGACAGCCATGACACCTCGAATACGATGCTCAAGTACATAAGCGAGATGCTGATGGACGAAGAGGAGGATCTCAAAACGAAGCCCTGTATGCTTCTTGACTGCTTGGCTCTTCAGGCTGCTGAGAAATCTTTTTATGATGTTCTTGGTAAGAAGTATCCCCCTTCTCCAATCGGAAATGGCGATTTTGCTCGGAGTTTCTGCTGTGATTTGGCTTCTGGTAAGGCTGAAGATGAATCTGAATCTTTTAGTGGAAATTCCTCTGTTTATGCCCCTTTTGAGAATCCACTTTTGGGTCAAGATTCATTTCTTGGGATGCAATATATTGGGCATTTTAGGAAAGGAGCTGAGGAGGCTAGTAAGTTTCTTCCTGCTAATGGAAGATTTGGGACCATTGACTTGGATAATGATTTGTTTACATCTGCTCCTTCTAGGGCTGAGGATTTTTCTTGGGTTGTTGCTGAGAGAAATGGCAGATCCAGCCTTGAAAATGGGTTGTTGAGAGAGAAGAAGAATCATCAGAGGGAGGATAGTGATGAGGAGTTGAGAAGTAGTAAGCAGTCTGCTACTTATGCTGATGATAATTCACTGTCTGAGTTGTTTGATGAACTTTTGCTGTGTCGGGGCGAGAGTCGGCAGTCGCCGTCGTGGGGTTCGGACGAATCGTTGGACAACGAATCGAATAAGAAGTCGTCGAGGAGGAGGACGAAGGGGAAGAAGACTCGTTCTAGGAAGCAAGAGAATAGTGTGGAAGTTGTGGATTTATGGACATTGTTGACTCAATGTGCTCAGGCTGTTTCAAATTATGATCAAAGGACTGCAACTGAGCTGCTTAATCAGATCAGGCAGCATTCTAATCCATCTGGGGATGGAAATCAGAGATTAGCTTATTACTTTGCAAAGGGCCTCGAGACCCGGCTTGCGGCCGGGACGCCTCTGTATATGCCCTTTGCAAGCAATGAAACGTCTGCTGCTGATATCTTGAAAGCTTATCAGATGTTCATCAAGGCTTGCCCGTTTCGGCGGATGTCGTATTTCTATGCCAACAGAGTGATTCTGAAGCGAGCTGAGAAAGTAACAAGGCTGCATATTGTTGATTTTGGTCTTTTGTATGGTCTCCAATGGCCCTGCTTGATTCAGCGGCTCTCGCGCAGACCTGGTGGACCTCCAAAGCTTCGGATCACCGGGATCGAGCTTCCCCAGCCAGGATTCCGCCCCGCTGAACGGGTTGAGCAGACTGGACGTCGCCTTGCACATTACTGCAAGAGATTCAATGTGCCATTTGAACACAAGGTCTTGGCACAGAAATGGGAAACTGTTAGATATGAAGATCTCAATGTTGATAGAGATGAATCGACTATTGTGACTTGTATGTTCCGAATGAAGAACGTACCCGACGAAACCGTCGTCGCAAACAGCCCGAGAGACAGGGTTCTGAAGTTGATCAGGAAAATCAACCCAGATCTCTTCATTCATGAAGTCACAAACGGCTCTTTCAACACTCCATTCTTCAACACAAGGTTTAAGGAGGCACTCTTTTACTACTCATCATTGTTCGACATGTACGAGGCGACAATGCCTCGCGATAATCCACAGAGATATCTCTGCGAGAACGTAATCCTGGGAAGAGACATCATGAATGTCATAGCGTGCGAGGGGCTCGAGAGAGTCGAAAGGCCAGAGACGTACAAGCAATGGCAAGTAAGGAACACGAGGGCCGGGTTCAAGCAAGTACCATTAGATCAGGAACTGCTGAAGAGTGTGGAGAAGATAGTGACCACAGAATACCATCAGGACTTCGCGGTCGATCAGGACGGGGCGTGGATGCTGCAAGGCTGGAAGGGACGGATCATCGACGGGTTGTCGTGTTGGGTAGTTGCCTAA 2100 47.81 MDNLLDDFSNSWSNFHFHPHLSNGLFKVNREIVDPLQIPAKPQQDQHQLSNNSSSSTSTSPSLSPSSSEGDSPDSHDTSNTMLKYISEMLMDEEEDLKTKPCMLLDCLALQAAEKSFYDVLGKKYPPSPIGNGDFARSFCCDLASGKAEDESESFSGNSSVYAPFENPLLGQDSFLGMQYIGHFRKGAEEASKFLPANGRFGTIDLDNDLFTSAPSRAEDFSWVVAERNGRSSLENGLLREKKNHQREDSDEELRSSKQSATYADDNSLSELFDELLLCRGESRQSPSWGSDESLDNESNKKSSRRRTKGKKTRSRKQENSVEVVDLWTLLTQCAQAVSNYDQRTATELLNQIRQHSNPSGDGNQRLAYYFAKGLETRLAAGTPLYMPFASNETSAADILKAYQMFIKACPFRRMSYFYANRVILKRAEKVTRLHIVDFGLLYGLQWPCLIQRLSRRPGGPPKLRITGIELPQPGFRPAERVEQTGRRLAHYCKRFNVPFEHKVLAQKWETVRYEDLNVDRDESTIVTCMFRMKNVPDETVVANSPRDRVLKLIRKINPDLFIHEVTNGSFNTPFFNTRFKEALFYYSSLFDMYEATMPRDNPQRYLCENVILGRDIMNVIACEGLERVERPETYKQWQVRNTRAGFKQVPLDQELLKSVEKIVTTEYHQDFAVDQDGAWMLQGWKGRIIDGLSCWVVA 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 46582653 46584752 + Lag0023260.1 Lac7g2743 615644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2743 699 MobiDBLite consensus disorder prediction 40 79 - -
Lac7g2743 699 MobiDBLite consensus disorder prediction 235 259 - -
Lac7g2743 699 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 303 690 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Lac7g2743 699 MobiDBLite consensus disorder prediction 235 262 - -
Lac7g2743 699 MobiDBLite consensus disorder prediction 41 79 - -
Lac7g2743 699 ProSiteProfiles GRAS family profile. 318 697 IPR005202 -
Lac7g2743 699 Pfam GRAS domain family 329 696 IPR005202 -
Lac7g2743 699 MobiDBLite consensus disorder prediction 283 318 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0856 Lac-Chr3:6861724 Lac7g2743 Lac-Chr7:46582653 3.50E-44 dispersed
Lac7g2743 Lac-Chr7:46582653 Lac9g1970 Lac-Chr9:39446838 2.30E-56 dispersed
Lac13g0736 Lac-Chr13:5707303 Lac7g2743 Lac-Chr7:46582653 2.50E-40 transposed
Lac2g1740 Lac-Chr2:16264994 Lac7g2743 Lac-Chr7:46582653 8.40E-60 transposed
Lac10g3111 Lac-Chr10:45491599 Lac7g2743 Lac-Chr7:46582653 1.80E-158 wgd
Lac7g2743 Lac-Chr7:46582653 Lac9g2460 Lac-Chr9:43500780 2.80E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24225 PF03514 GRAS 3.80E-113 CL0063 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2743 K27753 - csv:101217374 1159.05