Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac7g2750 | ATGCTCCCTCTTCTTCTTTTCTTTCTTCTCTTTCTCTTTCTCCTTTGCCTTCAATGGCGCCACCCGAAACACAAACTCCTCCCTCCCGGCTCGATGGGCTGGCCTTACATCGGCGAAACCTTCAAACTCTACACTCAAAACCCCAACACCTTCTTCTCCATTAGGCGAAAAAGGTATGGTGATGTGTTTAAGACGCATATATTGGGATGTCCATGTGTGATGATTTCAAGCCCTGAGGCTGCGAGAGTTGTGCTTGTGAGTAAGGCTCATCTGTTCAAGCCAACTTATCCGCCAAGCAAAGAGAGAATGATTGGCCCTCAAGCTTTGTTCTTTCATCAAGGGCCTTACCATTCTAGCCTTAAGAAGCTCATCCAAGCTTCCTTTTTGCCCTCTGCTATCAAAGCCTCTGTCTCTCAGATTGAGAACATTGTGCTCCACCTTCTCCCCTCTTGGAATAATGACTCCCAAATCAACACCTTGCAACAAATGAAAAGGTTTGCTTTTGATGTGGCGATGATCTCGGCTTTTGGAGACCAACAAGACATAGAAATAGAGAGAATCAAACATTTGTACCAATGCCTTGAAAAGGGCTACAATTCTATGCCTCTCGATCTTCCCGGAACTCCTTTTCACAAAGCAATGAAGGCGAGGAAGTTGCTGAGCGAGACATTGGGGAAGTTGATAGAGAAAAGACGGCGGAGCAAGGAGCACGGAGGAGGGCTGCTGGCAACACTATTGGACGGCGGCGGCGACGACGGCGACGAAAAGGAGAAAAACAAGCTGAGTGATTCACAAATAGCTGATAACATAATAGGAGTGATATTTGCAGCTCAAGACACGACAGCCAGTGTTTTAACATGGATTCTAAAGTACTTACACGACAATCACCATCTTCTCGAAGCAGTTAAGAAGGAGCATGAGGCAATTTTCCAAAGGAAAGTGTGCGAAGGGAAGCGTGGCCTCACGTGGGATGATACCAGGCGCATGCCGTTGACCAGTCGAGTGATACAAGAAACCCTAAGAACAGCAAGTGTAGTGTCATTCACATTCAGAGAAGCAGTGGAAGAGGTTGAGTTTGAAGGTTATTTAATCCCAAGAGGATGGAAAGTTCTTCCTCTCTTCAGAACCATTCATCACTCTGCAGATTTCTTCCCACACCCCGAGAACTTTGATCCTTCAAGATTCGAGGTGCCACCAAGACCAAACACATACATGCCATTTGGAAATGGAGTGCACTCGTGTCCAGGCAGTGAGATGGCTAAGCTTGAAATGCTCGTTCTTCTCCACCACCTCACCATCACTTACAGATGGAAAGTGGTGGGAGAGGAAACTGGAATACAGTATGGTCCATTTCCTGTGCCAAAAGGGGGGTTGCCCATAAAAGGCCCTCCTGTGAAGTGTGAAAGGACAAGGACAGGCTTGGCCTCGCTGGAATCAGACCCACGAGGTAATAATAATACCCAAATGGTGTCTGTGTTTGAGACATATAACATCAAGTACGGTGTGCACCCTAGAATTCCACGTTGTGCTGTGTCAGGGCACCAAGAAATGCAGGCCTGCGTGGATCGTTAA | 1572 | 47.01 | MLPLLLFFLLFLFLLCLQWRHPKHKLLPPGSMGWPYIGETFKLYTQNPNTFFSIRRKRYGDVFKTHILGCPCVMISSPEAARVVLVSKAHLFKPTYPPSKERMIGPQALFFHQGPYHSSLKKLIQASFLPSAIKASVSQIENIVLHLLPSWNNDSQINTLQQMKRFAFDVAMISAFGDQQDIEIERIKHLYQCLEKGYNSMPLDLPGTPFHKAMKARKLLSETLGKLIEKRRRSKEHGGGLLATLLDGGGDDGDEKEKNKLSDSQIADNIIGVIFAAQDTTASVLTWILKYLHDNHHLLEAVKKEHEAIFQRKVCEGKRGLTWDDTRRMPLTSRVIQETLRTASVVSFTFREAVEEVEFEGYLIPRGWKVLPLFRTIHHSADFFPHPENFDPSRFEVPPRPNTYMPFGNGVHSCPGSEMAKLEMLVLLHHLTITYRWKVVGEETGIQYGPFPVPKGGLPIKGPPVKCERTRTGLASLESDPRGNNNTQMVSVFETYNIKYGVHPRIPRCAVSGHQEMQACVDR | 523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 46655566 | 46663391 | + | Lag0023267.1 | Lac7g2750 | 615651 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac7g2750 | 523 | SUPERFAMILY | Cytochrome P450 | 20 | 461 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 407 | 416 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac7g2750 | 523 | Pfam | Cytochrome P450 | 28 | 441 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PRINTS | P450 superfamily signature | 405 | 414 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PRINTS | P450 superfamily signature | 276 | 293 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PRINTS | P450 superfamily signature | 414 | 425 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PRINTS | P450 superfamily signature | 334 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PRINTS | E-class P450 group I signature | 285 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PRINTS | E-class P450 group I signature | 404 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PRINTS | E-class P450 group I signature | 265 | 282 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PRINTS | E-class P450 group I signature | 373 | 397 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PRINTS | E-class P450 group I signature | 56 | 75 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PRINTS | E-class P450 group I signature | 414 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PRINTS | E-class P450 group I signature | 333 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | CDD | CYP90-like | 55 | 461 | - | - | |
| Lac7g2750 | 523 | MobiDBLite | consensus disorder prediction | 240 | 260 | - | - | |
| Lac7g2750 | 523 | FunFam | Abscisic acid 8 | 18 | 463 | - | - | |
| Lac7g2750 | 523 | Gene3D | Cytochrome P450 | 19 | 463 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2750 | 523 | PANTHER | CYTOCHROME P450 26 | 27 | 443 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac3g1581 | Lac-Chr3:14984317 | Lac7g2750 | Lac-Chr7:46655566 | 1.30E-28 | dispersed | |
| Lac5g2295 | Lac-Chr5:41621638 | Lac7g2750 | Lac-Chr7:46655566 | 1.10E-158 | dispersed | |
| Lac6g0434 | Lac-Chr6:3550269 | Lac7g2750 | Lac-Chr7:46655566 | 6.50E-17 | dispersed | |
| Lac6g0435 | Lac-Chr6:3552564 | Lac7g2750 | Lac-Chr7:46655566 | 1.90E-32 | dispersed | |
| Lac7g0373 | Lac-Chr7:2868507 | Lac7g2750 | Lac-Chr7:46655566 | 1.10E-63 | dispersed | |
| Lac7g2750 | Lac-Chr7:46655566 | Lac8g2762 | Lac-Chr8:44946909 | 2.90E-59 | dispersed | |
| Lac7g2750 | Lac-Chr7:46655566 | Lac6g0318 | Lac-Chr6:2614235 | 1.90E-148 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac7g2750 | K09843 | - | csv:101216531 | 824.313 |