Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2753 ATGGGAGAGGAGGTGAAGATGGGCGAGTATGAGAGCGGTGTTGCCGACGATGACAACGGTGGTCATGAGGAGCGAGTGTTTGAATGGGAGACGGGTTTGCCTGATGCGGATGATCTCACTCCTCTGTCTCAGACGTTGATTCCGCCGGAGCTTGCGTCGGCATTCAGTATCTCGACGGGGCCGTGTCGGACGGTGATGGATGTCAATCGGGCGTCGCATAATACACTTTCGAATCTTCGGGGATTTCAATCGCAGGCGTTTTCGTCGAATAATTTCAAGTCGTTTAACGATGATCGAGCTCGGGATCATGATCCGATGGTGGTTGAAGGAGATGAGGCGACGGAGAGAGATGCGGGGTCGGATTCTAGGAAATTGAGGAAGGTTGATTGTGCGGAGGAGGCTGATTCGGCTCTTCGGGCTGATAATTCGATGGATGATCCGTCGGCTCGGACGTTGAAGAGACCGAGGCTCGTTTGGACGCCGCAATTACACAAGCGGTTTGTGGACGTTGTTGCTCATCTTGGGATTAAGAACGCGGTTCCTAAGACGATTATGCAGTTGATGAACGTGGAGGGATTGACTCGGGAGAATGTTGCGAGTCATCTTCAGAAATATAGGCTTTACTTGAAGAGGATGCAGGGATCTTCCAACGAGGGCCCATCGTCGCCGGACCGGCTTTTTGCGTCCACGCCTGTACCGCAGAGCTTGCACGAGTCTAGCAACAGTGGGCATGCGAATGGAAATGGGCACTTGCCAGTTCCGACTCCGATGCCGTATGGACCGCCGATGTTGCCTATGCCGGTGCTTGGCATGGCAGCGCCTGGTCATGCTCACAGTTATATGGGTATGCCTGTCGCTCATCCGGGAAGCGCACAGGGATACCATGGGTTTGAAACGCATCCTTACAACATGATGCATCAGAGAGATTGGTCGGGGAACAAATACGGCTCGATCGTGCCTTACCCTCATCCTCATGTACCTCCTAGTACTAATGATAAGTGA 1002 53.09 MGEEVKMGEYESGVADDDNGGHEERVFEWETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTVMDVNRASHNTLSNLRGFQSQAFSSNNFKSFNDDRARDHDPMVVEGDEATERDAGSDSRKLRKVDCAEEADSALRADNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRLFASTPVPQSLHESSNSGHANGNGHLPVPTPMPYGPPMLPMPVLGMAAPGHAHSYMGMPVAHPGSAQGYHGFETHPYNMMHQRDWSGNKYGSIVPYPHPHVPPSTNDK 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 46695277 46696278 + Lag0023270.1 Lac7g2753 615654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2753 333 MobiDBLite consensus disorder prediction 213 256 - -
Lac7g2753 333 FunFam Two-component response regulator 150 213 - -
Lac7g2753 333 Pfam Myb-like DNA-binding domain 157 206 IPR001005 -
Lac7g2753 333 NCBIfam myb-like DNA-binding domain, SHAQKYF class 155 207 IPR006447 GO:0003677(InterPro)
Lac7g2753 333 MobiDBLite consensus disorder prediction 93 122 - -
Lac7g2753 333 MobiDBLite consensus disorder prediction 214 248 - -
Lac7g2753 333 MobiDBLite consensus disorder prediction 1 23 - -
Lac7g2753 333 SUPERFAMILY Homeodomain-like 151 211 IPR009057 -
Lac7g2753 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 210 IPR017930 -
Lac7g2753 333 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 19 284 IPR044841 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)
Lac7g2753 333 Gene3D - 151 213 - -
Lac7g2753 333 MobiDBLite consensus disorder prediction 95 122 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2310 Lac-Chr10:35371390 Lac7g2753 Lac-Chr7:46695277 2.60E-38 dispersed
Lac1g1554 Lac-Chr1:36834410 Lac7g2753 Lac-Chr7:46695277 8.90E-37 dispersed
Lac7g0922 Lac-Chr7:7732095 Lac7g2753 Lac-Chr7:46695277 1.70E-19 dispersed
Lac7g2753 Lac-Chr7:46695277 Lac9g1599 Lac-Chr9:35193762 6.40E-12 dispersed
Lac7g2753 Lac-Chr7:46695277 Lac9g2452 Lac-Chr9:43445448 3.50E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24226 PF00249 Myb_DNA-binding 1.40E-08 CL0123 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2753 - - - 0.0