Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2853 ATGAACAACCCATCAGAGGAAAATGTTGAAACAGAAGGCATCTCTTCAAAGAATGCGAAGAACGAGTCGTACAGAAGTGTGCTTATGTTGGCTTACCAAAGTCTAGGAGTTGTCTATGGCGACCTCAGCACCTCCCCTCTGTATGTTTACAAAACCACCTTCTCTGGGAAATTGAGTCTCCATGAGAATGATGAAGAGATTTATGGGGTTCTATCCTTCATCTTCTGGACATTTACACTCATTGCTCTCTTCAAATACGTTTTCATTGTCATGTCAGCCGACGATAATGGTGAAGGGGGTGCCTTTGCACTGTACTCTCTTCTCTGCAGGCATGCTAGACTATGCATTCTACCGAATCAAGAGCCTGTCGATGAAAAGTTATCTGCGTATGACATGAAGGGAATTTCGGAGACGAGAGCAAGTGCTGCTCTGAAGTCTTTTTTTCAGCTGCATCCGTCTTTTCGAAAAGGTTTTTTGGTGTTCGTGCTCTTTGGAACCTCCATGGCTATTGGGGATGGAGTGCTCACTCCTGCAATATCCGTTCTTTCAGCAGTCTCAGGAGTCAAACATAAGATCACTGGACTGCATGAGAATTATGTTGTTTTAATCTCGTGCGTCATCTTAGTTGGACTGTTCTCCCTTCAGCATCGTGGAACGCACAAAGTCGCTTTCATGTTTGCTCCAATCATCATGGCATGGCTTATTTCTATCAGCGTTATCGGAATGTATAATATTATCAAGTGGAATCCACGTATATATCATGCACTCTCTCCAGTTTATATGCTGAAGTTCCTTAGAAGCACAGGCGTCGAAGGTTGGATTTCATTAGGCGGAGTCGTTCTCTCTATAACAGGTGTGGAGGCAATGTTTGCTGATTTAGGCCACTTCTCTTCGCTTTCGATCAAGATTGCTTTCACATTTCTTGTATATCCTTCCTTGATCCTTGCTTATCTTGGTGAGGCTGCATTCCTCTCTAAGCACCATGAAGATATTCAGAGAAGCTTCTACAAAGCAATACCTGAAGCGGTGTTTTGGCCGGTGTTCGTCGTGGCAACTTTTGCTTCTGTCATAGGAAGTCAGGCCGTGATTTCGGCTACATTCTCCCTCGTAAACCAGTGCTGTGCTCTGAATTGCTTCCCCCATGTGAAAATTAAGCACACTTCAAACCAAATATATGGGCAGATTTATATCCCAGAAGTTAATTGGATGCTAATGTGCCTTTGTTTAGCTGTGACAATTGGCTTGAGAGACACAAACATGATAGGCCATGCATATGGGCTGGCAGTCACCATTGTTATGTTTGTCTCAACTTGCTTGATGGCACTTGTGATAATAATTGTTTGGAAGCAGAAGTTGATCAATGCCATAGTGTTTTTCTTGTTTTTCGGGTCGATCGAACTGCTTTACATCACGGCCTCATTTAGCAAAGTTCACGAAGGCGGGTGGATCCCCATCGTGCTTTCTGCGCTCTTTATGTGTTCGATGTATACATGGTACTACGGGACAATGAAGAAACACGAATACGATGATGAGAACAAAGTGTCGATGAATAGGATACTTTCTTCAGGTCCCAGCCTCGGCATAGTACGCGTGCCCGGAATTGGACTCATATACACTAATCTGGTCTCTGGTGTTCCTGCTGTTTTTGGTCACTTTGTAACCACTTTGCCTGCATTTCATCAAGTGCTTGTCTTTGTTTGTATAAAGTATGTTCAAGTTCCCCATATCGACGAAGAAGATCGTTTGCTCATTACAAGGGTCGGGCCGAAAGAATGCAACATGTTTCGGTGCATCGTGAGGTACGGTTATCGGGATTTGCTACAAGAAAACTACAATTTCGAGACCCGCTTGGTGTTTTCTCTAGTACAGTATGTAGAAACAGAAGATCACTTTTGGAAACCAATGACACAAGTCTCTAGAGGATGTGAAAATTCAGAAGAAGAACCTTGTGAATATGAACCATTGGAGCAGGATTTCACAAGCTCAAATATGTTGCAGTCTTCCTTCAAATATCAAACGGATACCGCAGTCGACGACGACGATCAGGAGAAGTCTATACATAACGAGGAAGCGATGCAGATAATGAGAGCGAAGGAATCGGGAATCACGTACATTTTCGGGCATTGCTCGGTCAAGGCCAAGAAATCGTCCTCCATTTTGAAGAAGTTAGCCATTGATATTGTGTATGCTTTTTTGAACCAAAATTGCAGGGAGCCTGAGGTTCTTCTGAATGTGCCTCACACTTCTCTCTTGGAAGTTGGCATGGTATATTATGTATAG 2280 43.33 MNNPSEENVETEGISSKNAKNESYRSVLMLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIYGVLSFIFWTFTLIALFKYVFIVMSADDNGEGGAFALYSLLCRHARLCILPNQEPVDEKLSAYDMKGISETRASAALKSFFQLHPSFRKGFLVFVLFGTSMAIGDGVLTPAISVLSAVSGVKHKITGLHENYVVLISCVILVGLFSLQHRGTHKVAFMFAPIIMAWLISISVIGMYNIIKWNPRIYHALSPVYMLKFLRSTGVEGWISLGGVVLSITGVEAMFADLGHFSSLSIKIAFTFLVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFVVATFASVIGSQAVISATFSLVNQCCALNCFPHVKIKHTSNQIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLAVTIVMFVSTCLMALVIIIVWKQKLINAIVFFLFFGSIELLYITASFSKVHEGGWIPIVLSALFMCSMYTWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVRVPGIGLIYTNLVSGVPAVFGHFVTTLPAFHQVLVFVCIKYVQVPHIDEEDRLLITRVGPKECNMFRCIVRYGYRDLLQENYNFETRLVFSLVQYVETEDHFWKPMTQVSRGCENSEEEPCEYEPLEQDFTSSNMLQSSFKYQTDTAVDDDDQEKSIHNEEAMQIMRAKESGITYIFGHCSVKAKKSSSILKKLAIDIVYAFLNQNCREPEVLLNVPHTSLLEVGMVYYV 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47672173 47676460 + Lag0023370.1 Lac7g2853 615754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2853 759 Pfam K+ potassium transporter C-terminal domain 532 757 IPR053952 -
Lac7g2853 759 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 17 759 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac7g2853 759 NCBIfam potassium uptake protein 30 759 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac7g2853 759 Pfam K+ potassium transporter integral membrane domain 30 521 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g2853 Lac-Chr7:47672173 Lac8g0033 Lac-Chr8:587969 4.00E-235 dispersed
Lac7g2853 Lac-Chr7:47672173 Lac8g2602 Lac-Chr8:43649500 4.40E-226 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2853 K03549 - csv:101222845 1357.43