Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2870 ATGTCGTCGATTGACAAGGCCGAACTGGTCTGCGTCACCGGCGCCAGTGGCTGTATCGGATCCTGGCTCGTTCACCTCCTCCTCCTCCGTGGCTACTCCGTTCACGCCACCGTCCAAAATCTCAAGGATGAGAAAGAAACCAAGCATCTGGAAGATTTAGAAGGAGCGGATGCTAGTCTTCGTCTCTTCCAAATCGATCTCCTCGATTACCACTCCATCGTCCCTGCCGTCACTGGTTGCGCCGGCGTCTTCCACCTCGCGTCTCCCTGCATTGTCGATCCTGTAGAAGATCCTGAGAGAGATTTATTGGATCCGGCAATCAAAGGAACCATCAACGTCCTCACGGCGGCTAAGGAGGCTGGGGTACAACGCGTAGTGGTAACTTCTTCTATCTCCGCCATGATTCCGAACCCTCACTGGCCGGCGAATGTTGTAAAGAATGAAGAATGCTGGACCGATATTGATTACTGCAAACAAAACGGGCTGTGGTATTCGGTTTCAAAAACTCTAGCAGAAAAGGCTGCTTGGGATTTTGCCAAGGAGAAAGGATTAGATGTGGTGGTGATTAACCCAGGCACAGTGATGGGCCCTGTGTTTCCTCCCAGAATTAATGCAAGCATGCAAATGCTTTTAAAACTTCTCGAGGGGTGTAGTGAGACATTCGGGGACGTGTTTATCGGTGTAGTGCACTTTAAAGATGTTGCATTAGCACACATTTTGGTCTATGAAAAAAAATCAGCTACAGGAAGGCACTTTTGTGCCGAGGCCATAGCTCGTTACTCTGACTATGTTGCAAAGGTTGCTGAACTCTTCCCTCAATATAAGGTGCCCAGGTCGGTAGAAGATACGCAACCTGATTTGGTGAGAGCAAAAGATGGAGCTAAGAAGTTGATGAACCTGGGGCTGGAATTCATCCCAATGGAAGAAATCCTCAAGGACGCCGTTGAGTATTTTAAAAAGAATGGATACATTTCCTGA 978 48.47 MSSIDKAELVCVTGASGCIGSWLVHLLLLRGYSVHATVQNLKDEKETKHLEDLEGADASLRLFQIDLLDYHSIVPAVTGCAGVFHLASPCIVDPVEDPERDLLDPAIKGTINVLTAAKEAGVQRVVVTSSISAMIPNPHWPANVVKNEECWTDIDYCKQNGLWYSVSKTLAEKAAWDFAKEKGLDVVVINPGTVMGPVFPPRINASMQMLLKLLEGCSETFGDVFIGVVHFKDVALAHILVYEKKSATGRHFCAEAIARYSDYVAKVAELFPQYKVPRSVEDTQPDLVRAKDGAKKLMNLGLEFIPMEEILKDAVEYFKKNGYIS 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47838316 47841003 - Lag0023387.1 Lac7g2870 615771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2870 325 CDD FR_SDR_e 10 302 - -
Lac7g2870 325 FunFam Cinnamoyl-CoA reductase 1 3 325 - -
Lac7g2870 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 316 IPR050425 GO:0016616(PANTHER)
Lac7g2870 325 Pfam NAD dependent epimerase/dehydratase family 10 251 IPR001509 -
Lac7g2870 325 Gene3D - 2 325 - -
Lac7g2870 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 319 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g1814 Lac-Chr5:36117689 Lac7g2870 Lac-Chr7:47838316 2.50E-85 dispersed
Lac7g2870 Lac-Chr7:47838316 Lac9g2808 Lac-Chr9:46174469 6.40E-73 dispersed
Lac7g2869 Lac-Chr7:47832551 Lac7g2870 Lac-Chr7:47838316 1.00E-139 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2870 - - - 0.0