Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2884 ATGGTGGACAACGGCGAGGAGAAGCTGCTGGCTATGGCTCGCCACATAGCCAAGACTATGGGCCGTAACGAGTCCATGGCCGATGATATTTTGGAGATTTTTTCCAATTTCGATGCTAGGTTTTCCCTTGATAAGTTGTCTGATAAAGCCGATGAGCTTGATCCCAGAGCCCCCGCCGCTTTGCAGCGCTCTCTCAAGTCTTTGGACCGCCGGATCTCCCAGTACTTGGCCGCCGACCATCCGATTTGGGCGGATTCCGCCGATTCCTCTGCTTTTCTTGATGCTATTGATGAGTTGATGGCCACCATTAGGGACTGGACGCCGATGGGTAGGGATAAGTCTGTTGGCACCTACCTCGCTCGCGCCGACGATCTGATGCAGCAGGCTATGTTCCGCGTCGAGGAAGAGTTCCGGTCGTTGATGGAGCGCGGAGGTGAGTCCTTTGAACTGACTCGCCATTTCAGAAACGGTGAGTCAACGGGCGATTATTGCTTCGATTCTGAGGAAGATGAGGAAGCTGCGGAGGGAATTCTTGGCGACGGGCTCCAGATCCCTGTGGCGCAGCCGGTGACGGACTACAACATCGTAATCGATGCGCTTCCGTCGGGGACTATCAGCGATCTCCATGAGATAGCGAAGCGCATGGTGGCGGCTGGGTTCGAGAAGGAGTGTTCGCACGCTTACAGTAGCTGCAGGAGGGAGTTCTTGGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAGCTGAGCATGGATGAAGTTCAAAAGATGCAATGGCAAGACATGGAAGAGGAGATTGAGCGCTGGATGAAAGCGATTACCGTCTCCCTTCGAATCCTCTTCCCAAGCGAACGACGGCTCTGCGAACGCGTCTTCGTCGGCCTCTCCTCCGCCGCTGACCTCTCTTTCATGGAGGTCTGCCGAGGATCGACGATTCAGCTATTGAATTTTGCAGATGCGGTGGCAATTGGCTCTCGCGCACCGGAACGACTGTTCAAAATTCTCGACATGTTCGAGACCTTGAGAGACCTGATGCCGGAGTTTGATTCCGTATTTTCAGACCAGTACTGCCTGTTGCTTAGAAATGAAGCAATTACAATCTGGAAAAGATTAGGCGGAACAATCAAGGGGATCTTCATGGAGCTTGAGAATTTGATCCGCCGTGATCCGGCTAAAACTCCAGTGCCGGGCGGCGGCCTTCATCCAATTACTCGATATGTGATGAATTACCTTAAAGCCGCCTGTAAATCGCGGCAGACTTTGGAGCAAGTTTTCGAAGAAATCGCTCTTCCCTCTAAAGATTACACCAAGCTCGAGGACAGAGCAGCAGCATCGTCTTCGTTATCAGTTCAAATGGATTGGATTATGGAGCTTTTAGAGAGCAATTTAGAGGCGAAGTCGAAAATATACAAGGATCTTTCCTTAGGCTCTGTGTTTCTGATGAACAATGGCCGATACATTGTTCAGAAAGTGAAAGACAGTGAATTAGGATCAGTTTTAGGCGACAATTGGATTCGAAAACACATGGCTAAAAGTCAGCAATACCTAAAGAATTACCTGAAAAGCTCATGGAGCAAGGTGATCGGAGTATTGAAAATGGACAGTGGCTCTTTAGCTCCCGCTGTAATGAAAGAGAAGCTCAAATCATTCAATGTGCAGTTTGAAGAAATCTGCCAAACCCAATCTACATGGGTGATATTCGAGCATCAGCTTAGAGAAGAAGCAAGAATCTCAGTTGCCAAAGCCCTGCTGCCGGCATATCAAAATTTCATCGGAAGGTACCAGAGTTTGCCGGAGTTGGCAAAGCGTACAGACCGGTATTTGAAGCTCACGGCGGAGGATGTGGAGGCTCGGATCTCCGAGCTCTTCGAAGGAGGTGGCGGCTCTGGTGGCGGAAGGCGGTGA 1902 50.47 MVDNGEEKLLAMARHIAKTMGRNESMADDILEIFSNFDARFSLDKLSDKADELDPRAPAALQRSLKSLDRRISQYLAADHPIWADSADSSAFLDAIDELMATIRDWTPMGRDKSVGTYLARADDLMQQAMFRVEEEFRSLMERGGESFELTRHFRNGESTGDYCFDSEEDEEAAEGILGDGLQIPVAQPVTDYNIVIDALPSGTISDLHEIAKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLQKLSMDEVQKMQWQDMEEEIERWMKAITVSLRILFPSERRLCERVFVGLSSAADLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETLRDLMPEFDSVFSDQYCLLLRNEAITIWKRLGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLKAACKSRQTLEQVFEEIALPSKDYTKLEDRAAASSSLSVQMDWIMELLESNLEAKSKIYKDLSLGSVFLMNNGRYIVQKVKDSELGSVLGDNWIRKHMAKSQQYLKNYLKSSWSKVIGVLKMDSGSLAPAVMKEKLKSFNVQFEEICQTQSTWVIFEHQLREEARISVAKALLPAYQNFIGRYQSLPELAKRTDRYLKLTAEDVEARISELFEGGGGSGGGRR 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47942878 47944779 + Lag0023401.1 Lac7g2884 615785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2884 633 SUPERFAMILY Cullin repeat-like 83 623 IPR016159 -
Lac7g2884 633 PANTHER EXOCYST COMPLEX PROTEIN EXO70 63 624 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Lac7g2884 633 Gene3D Exocyst complex component Exo70 82 628 - -
Lac7g2884 633 Pfam Exo70 exocyst complex subunit C-terminal 267 620 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Lac7g2884 633 Pfam Exocyst complex component Exo70 N-terminal 86 142 - -
Lac7g2884 633 FunFam Exocyst subunit Exo70 family protein 76 629 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2316 Lac-Chr1:44527486 Lac7g2884 Lac-Chr7:47942878 4.10E-89 dispersed
Lac4g0533 Lac-Chr4:12131319 Lac7g2884 Lac-Chr7:47942878 9.20E-87 dispersed
Lac7g2884 Lac-Chr7:47942878 Lac8g1970 Lac-Chr8:38146116 4.50E-107 dispersed
Lac7g2884 Lac-Chr7:47942878 Lac10g0582 Lac-Chr10:4476452 3.90E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2884 K07195 - csv:101204511 1129.39