Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2901 ATGGATTCACAGTGCATCAAATTGTGGTGTCTTTTAGTGTTTGTTTCATCGATAACTTTGAGCTCTGGCAGTTTATCCGCAGACTTTTACAAGAGCTCATGCCCCAAATTACTCTCCACTGTCCGACGCGAAGTCGTGAAAGCAGTGGCAAAAGAGTACAGAATGGGGGCCTCGTTGCTTCGCCTCCATTTTCACGACTGCTTTGTCAATGCATGGATCTCTCTAGTTGTCAAGATTTTAATGGTGGGATGTGATGCGTCGGTGCTGCTGGATGACACGTCCAACTTCACAGGAGAAAAGACGGCAATCCCAAACAAAGATTCTCTGAGAGGTTTTGAAGTGATCGACAATATCAAAACGCTGGTGGAGGCGAGCTGCCCTTCTGTGGTTTCTTGCGCTGATATTCTCTCCATTGCAGCCCGGGACTCAGTGGTTGCACTTGGTGGGCCTTCGTGGGTTGTTGGGCTTGGCAGGAGAGACTCCACCAATGCCAGCTTCGACACCGCCAACAATGACCTTCCATCTCCCTTCCTCGACCTCCCCGACCTCGTCTCCGCCTTCTCCAACAAAGGCTTCAACACCAAAGAATTGGTCGCCCTCTCCGGATCTCACACAATAGGCCAAGCCAGGTGCGCAATGTTCCGAGTAAGGGCCCATAACGAAACCAACATCGATTCGGAGTTGGCGGCTTCTTTAAGATCCAACTGCCCTCTGTCCGGCGACGACGACAAGCTTTCATCTTTGGACGTCGACACCCCTTCCAACTTCGACAACGCTTATTTCAAGAACTTGGTTCAGAACAAAGGGGTTCTTCATTCCGACCAAGCCCTCTTCAACAACGCCTCCGCCGACTCTCATGTCACCTCTTACTCCTCCGACTCTTCGGCTTTCTTCTCCGACTTCGCCGCCGCCATGGTTAAGATGTCTAACCTCACCCCACTCACCGGAACTGCCGGTCAGATTCGCTCCGACTGCCGCAAAATCAATTGA 990 51.41 MDSQCIKLWCLLVFVSSITLSSGSLSADFYKSSCPKLLSTVRREVVKAVAKEYRMGASLLRLHFHDCFVNAWISLVVKILMVGCDASVLLDDTSNFTGEKTAIPNKDSLRGFEVIDNIKTLVEASCPSVVSCADILSIAARDSVVALGGPSWVVGLGRRDSTNASFDTANNDLPSPFLDLPDLVSAFSNKGFNTKELVALSGSHTIGQARCAMFRVRAHNETNIDSELAASLRSNCPLSGDDDKLSSLDVDTPSNFDNAYFKNLVQNKGVLHSDQALFNNASADSHVTSYSSDSSAFFSDFAAAMVKMSNLTPLTGTAGQIRSDCRKIN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48102298 48103910 + Lag0023418.1 Lac7g2901 615802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2901 329 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Lac7g2901 329 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 Gene3D Peroxidase, domain 2 174 308 - -
Lac7g2901 329 PANTHER PEROXIDASE 72-RELATED 13 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 FunFam Peroxidase 28 178 - -
Lac7g2901 329 Gene3D - 28 329 - -
Lac7g2901 329 Pfam Peroxidase 41 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 CDD secretory_peroxidase 25 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac7g2901 329 SUPERFAMILY Heme-dependent peroxidases 25 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Lac7g2901 329 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 ProSiteProfiles Plant heme peroxidase family profile. 24 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac7g2901 329 FunFam Peroxidase 174 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3020 Lac-Chr1:50898535 Lac7g2901 Lac-Chr7:48102298 1.00E-13 dispersed
Lac7g2901 Lac-Chr7:48102298 Lac8g2856 Lac-Chr8:45719962 1.20E-98 dispersed
Lac7g2901 Lac-Chr7:48102298 Lac9g2340 Lac-Chr9:42696952 7.10E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2901 K00430 - csv:101221157 478.404