Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac7g2916 | ATGAGCGCCAGAGCAAGAGCTTATACATCATCTACTCCAATTGTTAGAGGAGTTCCATATACTAGACCTTACACCATGGATCTTCTCCTATTGGAGAAGGCTTTGTTGGGGGTGTTCGTGGCCATGGTTCTTGCTATTACCATATCCAAGCTCCGGGGCAAGCGTTTTAAACTCCCACCAGGTCCCATCCCCATACCTATATTCGGAAATTGGCTGCAGGTGGGTGATGACTTGAACCACCGCAACCTAACGGAGCTGGCAAAAAAGTTTGGGGACATACTGTTGCTGAAAATGGGGCAGCGAAACCTTGTGGTGGTTTCTTCACCAGAGCTAGCCAAGGAAGTGCTGCACACCCAGGGAGTCGAATTTGGGTCTAGGACCAGGAACGTGGTGTTCGATATATTCACAGACAAGGGTCAGGACATGGTGTTCACGGTGTACGGTGAGCACTGGAGGAAAATGAGACGAATCATGACTGTCCCCTTTTTCACAAACAAGGTGGTGCAGCAGAACAGGTTCGGTTGGGAGGAGGAGGCTGCCAGAGTTGTGGAGGATATAAAGAACAATCCAGAGGCTTCCACCACCGGCGTGGTTTTAAGGAGGCGACTGCAACTTCTGATGTACAACAATATGTACAGGATTATGTTTGACAGGAGATTTGAAAACATGGAGGACCCTCTCTTCAACAAGCTCAAGCTTATTAACGCAGAAAGGAGTCGACTATCTCAAAGCTTTGAATATAACTACGGCGATTTCATCCCCATACTCAGGCCTTTTCTGAGAGGGTATTTGAATGTGTGTAAGGACGTCAAGGAAAGGAGGCTCAAGCTCTTCAAGGACCATTTTGTTGATGAGAGGAGGAGGCTGACAAGCATGACGAGCAACAAGGAGGATGGTGTAAAATGTGCCATCGATCATATTGTGGAGGCTCAAGAGAATGGTGAGATCACCGAAGACAATGTTCTCTTCATTGTTGAGAACATCAACGTTGCCGCGATTGAGACAACATTGTGGTCGATGGAGTGGGCTATTGCTGAGCTTGTGAACCACCCCAATATCCAGAAAAAGCTGAGGGACGAGCTCGATTTGGTGCTTGGAGATAGTGTCCAAATTACAGAGCCGGACATTCGCAATTTGCCTTACCTGCAGGCTGTTATCAAAGAGACCCTACGGCTGAGAATGGCCATTCCTCTTCTAGTGCCTCACATGAACCTCCAAGATGCCAAGTTGGCTGGTTATGACATCCCTGCAGAGAGCAAGATTCTAGTGAATGCATGGTGGCTAGCCAACAACCCCAATCACTGGAACAAACCCCATGAGTTTCGACCTGAGAGGTTCTTGGAGGAGGAGGCTAATGTGGAGCCTAGCGGGAATGACTTCAGATACCTACCCTTCGGTGCTGGAAGGAGGAGCTGCCCTGGCATTGTTCTCGCCTTGCCTATTGTTGCTATTACTTTGGGTCGTCTCGTTCAGAATTTTGAGCTCATGCCTCCTCCTGGACAATCCAAGATTGATACCACTGAAAAGCCGGGGCAGTTCAGTCTGCAAATATTGAACCACTCCACTATTGTTGTAAAGCCAAGGTCCTTGTGA | 1593 | 48.27 | MSARARAYTSSTPIVRGVPYTRPYTMDLLLLEKALLGVFVAMVLAITISKLRGKRFKLPPGPIPIPIFGNWLQVGDDLNHRNLTELAKKFGDILLLKMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNRFGWEEEAARVVEDIKNNPEASTTGVVLRRRLQLLMYNNMYRIMFDRRFENMEDPLFNKLKLINAERSRLSQSFEYNYGDFIPILRPFLRGYLNVCKDVKERRLKLFKDHFVDERRRLTSMTSNKEDGVKCAIDHIVEAQENGEITEDNVLFIVENINVAAIETTLWSMEWAIAELVNHPNIQKKLRDELDLVLGDSVQITEPDIRNLPYLQAVIKETLRLRMAIPLLVPHMNLQDAKLAGYDIPAESKILVNAWWLANNPNHWNKPHEFRPERFLEEEANVEPSGNDFRYLPFGAGRRSCPGIVLALPIVAITLGRLVQNFELMPPPGQSKIDTTEKPGQFSLQILNHSTIVVKPRSL | 530 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 48199061 | 48200854 | - | Lag0023433.1 | Lac7g2916 | 615817 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac7g2916 | 530 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 26 | 529 | - | GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER) | |
| Lac7g2916 | 530 | PRINTS | P450 superfamily signature | 463 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | PRINTS | P450 superfamily signature | 384 | 395 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | PRINTS | P450 superfamily signature | 331 | 348 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | SUPERFAMILY | Cytochrome P450 | 59 | 528 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | Gene3D | Cytochrome P450 | 48 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | PRINTS | E-class P450 group I signature | 320 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | PRINTS | E-class P450 group I signature | 111 | 132 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | PRINTS | E-class P450 group I signature | 424 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | PRINTS | E-class P450 group I signature | 383 | 401 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | PRINTS | E-class P450 group I signature | 462 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | PRINTS | E-class P450 group I signature | 340 | 366 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | PRINTS | E-class P450 group I signature | 472 | 495 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | PRINTS | E-class P450 group I signature | 206 | 224 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | PRINTS | E-class P450 group I signature | 87 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac7g2916 | 530 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 465 | 474 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac7g2916 | 530 | CDD | CYP73 | 88 | 521 | - | - | |
| Lac7g2916 | 530 | FunFam | Trans-cinnamate 4-monooxygenase | 48 | 522 | - | - | |
| Lac7g2916 | 530 | Pfam | Cytochrome P450 | 59 | 520 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac7g2916 | Lac-Chr7:48199061 | Lac3g0567 | Lac-Chr3:4378230 | 1.70E-70 | dispersed | |
| Lac7g2916 | Lac-Chr7:48199061 | Lac9g2324 | Lac-Chr9:42579470 | 2.60E-249 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac7g2916 | K00487 | - | csv:101208511 | 931.784 |