Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac7g2919 ATGTTTCAACTCTGTTACATCATCTTCTTCTACCTTCTTGCAGGAATCATGGCGGACGAAGTTCAGAATGACGTGAACGATCAGGTGGCAGATATTGCCCCCTTTGATCCGACTAAGAAGAAGAAGAAGAAGAAGGTTGTACTGCAGGATCCAGCTGATGAGTCTGTTGACAAGTTAGCTGAGAAAACTGAAAGTTTGTCAGTTTCTGATGGTTTGGAGACTACCACATTTTCTGGACTTAAAAAGAAGAAGAAAAAACCAGTTGAGGCTAGCTCCTTGAATGACGATGGTGCAGATGCCACGGAGGATTTGGAAGATCAAGCAGGGGAAAATGAAGAACGAGAGGGAATTGTTCTACAGTATCGTTATCCGTGGGAGGGAAGTGATCGTGATTATGAATATGAGGAGCTTCTTGGACGGGTATTCAACATTCTTAGAGAGAATAATCCAGAGCTTGCAGGCGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCATCGGCAGCCAGATCATGTTATGGCCTTCTTATTGGCCGAACTGGGAACCAGTGGATCTCTTGATGGACAGCAGAGATTAGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATGTCAATGAATATGTGATTTGCATTGGGTGCAAGAGTCCAGACACTATCCTTTCAAAGGAGAATCGACTCTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATTAAGGCTGGTTTTGTTGCTCGTGTTGGCCGGAGGAACACTGGGACATGA 861 43.9 MFQLCYIIFFYLLAGIMADEVQNDVNDQVADIAPFDPTKKKKKKKVVLQDPADESVDKLAEKTESLSVSDGLETTTFSGLKKKKKKPVEASSLNDDGADATEDLEDQAGENEEREGIVLQYRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48208474 48214017 - Lag0023436.1 Lac7g2919 615820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac7g2919 286 Pfam Domain found in IF2B/IF5 155 264 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Lac7g2919 286 FunFam Eukaryotic translation initiation factor 2 subunit 129 271 - -
Lac7g2919 286 SMART eIF2Bneu4 156 265 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Lac7g2919 286 MobiDBLite consensus disorder prediction 88 115 - -
Lac7g2919 286 Gene3D - 129 271 - -
Lac7g2919 286 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 41 272 IPR045196 GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER)
Lac7g2919 286 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 131 238 IPR016189 GO:0003743(InterPro)|GO:0006413(InterPro)
Lac7g2919 286 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 235 270 IPR016190 GO:0003743(InterPro)|GO:0006413(InterPro)
Lac7g2919 286 MobiDBLite consensus disorder prediction 96 110 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g2509 Lac-Chr7:43038372 Lac7g2919 Lac-Chr7:48208474 9.30E-144 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac7g2919 K03238 - csv:101220978 520.005