Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g0033 ATGGAGCAAGGATCTGCCTTTTCCACTCCTTCCTCCCCTTCTCAGGTTTTCTTCTTCTTCTTTTCCTCTTTCCTCCATGCTTCTGCTTCAATTTCTTCTTCCTCTGCTGCTACTGTATTTCTCATATTCAATTTGCCATTACCCTCTTCTTGCTTTCTTGCCATCTTTGTCTGTTCCAAGATTGTTCCCGATTATGTCGCAAATGGGCGTTATTCTAATTCGCGAATTCGGATGGACTTTAGCGTGTTTGTGCCATGGGAATTTTATTCGGAGGTCTTGGCGCATAGTTTAGACGCCAAATTCCTTTTGCTTTCATCAGCGTACCTTACTAGAAATTTAATACTTGCATATCAAAGTTTTGGAGTAGTTTATGGAGACTTGAGCACTTCGCCGCTCTACGTTTACTCGAGTACATTTGCGGGGAAGTTGCATAAACATCAAACTGAGGAAGTAGTATTTGGTGCATTCTCCTTGATCTTTTGGACTTTTACATTGATACCATTATTGAAGTATGTTTTCATTGTATTGAGCGCAGATGACAATGGCGAAGGAGGAACCTTTGCTCTTTACTCCCTGCTCTGCCGACATGCTAAGTTGAGTTTACTTCCTAACCAACAAGCAGCTGATGAGGAGCTCTCAGCTTACAAATATGGTCCATCTTCTCATGTAGGAGCCCCTTCTCCACTAAAAAGGTTTTTGGAAAGGCATAAAACACTTAGGACGGTCTTACTTCTTGTCGTATTATTTGGTGCGTGCATGGTCATTGGTGATGGCGTGCTAACTCCTGCAATTTCAGTTCTATCCTCGGTTTCGGGCTTACAAGTTACAGAAGCAAAATTGACCAACGGGACACTCCTTTTGATTGCTTGTGCCATATTGGTTGGTCTGTTTGCTCTGCAGCATTGTGGCACCCATAAGGTTGCATTTATGTTTGCTCCAATCGTTATCATCTGGTTGTTGTCAATTTTCTCCATTGGTCTATACAACATAATACATTGGAACCCAAGTATTATACGTGCAATTTCCCCTCATTATATTATCAAGTTCTTTAGAATCACTGGTAAAGATGGTTGGCTTTCTCTCGGAGGGGTTCTTCTGGCCATAACTGGTACTGAAGCGATGTTTGCAGATCTTGGTCATTTCACTGCTTTGTCGATAAGGCTTGCATTTGCATTCGTTATCTACCCTTGTTTGGTAGTGCAATACATGGGTCAAGCTGCCTTTCTCTCTAAGAACCTTGATCTGTTTCCAAACAGTTTTTATGACTCGATACCTGAACCTGTATTTTGGCCTATTTTTGTTATTGCCACCCTTGCGGCTATTGTGGGGAGCCAGGCTGTCATTACTGCTACTTTCTCTATCGTCAAACAATGTCATGCCCTTGGTTGCTTTCCAAGAGTGAAAGTTGTCCACACCTCTAAACACATATATGGCCAGATCTACATCCCAGAAATAAACTGGATATTAATGATCCTCACTCTTGCCATTACGATAGGGTTCCAAGATACGACATTGATTGGAAATGCTTATGGACTTGCCTGCATGACAGTTATGTTCACTACGACATTTCTTATGGCGCTTGTCATAGTATTCGTTTGGCAAAAAAGTATCCTGCTGGCTGCACCTTTTCTCATCTTCTTCTGGTCTGTCGAGGGTGCCTACTTATCAGCAGCAATCATAAAAGTGCCTCAAGGAGGGTGGGTACCGCTTGTGCTGTCAGCCATTTTTATGATTGTTATGTTTGTCTGGCATTATGGCACTCGCAAGAAGTACAACTTTGATCTACACAATAAAGTTTCACTGAAGTGGTTGCTTGGACTAGGCCCTAGCCTTGGTATTGTTCGTGTCCCTGGAATTGGTCTCATATACTCGGAATTGGCGACTGGAGTTCCCGCAATATTTTCTCACTTTGTGACAAATCTCCCTGCGTTTCACAAAGTTTTAGTCTTTGTTTGTGTAAAGTCTGTTCCTGTTCCTTATGTCTCACCCGAAGAACGTTTTCTCATTGGGAGAGTCTGTCCTAGACCATATCGCATGTATCGGTGCATAGTGAGGTATGGCTACAAGGACATTCAGAAGGATGATGGGGACTTTGAGAACCAGCTAATACTAAACATTGCGGAATTTATTCAAATGGAGGCAGATGAACCACAATTCTCAAGCTCTGAAAGTTCTTCAATTGATGGGAGGATGGCTGTAATAAGCACTCGAAGCATACAATCAAGCTTGAGCTTAATAGTATCCGGGCATGAGGAAGTTGGTACCAGCAACTCCATCATCCACAGCAGCAAATCTGCCACACTCCAAAGTTTACGATCTGTCTATGAGGATGAGAATCCGCAACTAAGAAGGCGCCAAGTGAGGTTTCAGCTATCCCCCAGCCCTTCAATGGACCCTAGAGTTAGGGAAGAGCTGATTGACTTGATCCAAGCCAAAGAGGCCGGTGTAGCATATATCATGGGACACTCATATGTGAAGGCTAGAAGATCCTCATCGTATTTAAAAAAGCTTGTAATAGATATCGGGTACTCGTTCCTCCGAAAGAACTGCAGAGGCCCGTCTGTTGCACTCAATATCCCTCACATCAGCTTAATTGAAGTGGGCATGATATATTATGTTTAG 2622 42.83 MEQGSAFSTPSSPSQVFFFFFSSFLHASASISSSSAATVFLIFNLPLPSSCFLAIFVCSKIVPDYVANGRYSNSRIRMDFSVFVPWEFYSEVLAHSLDAKFLLLSSAYLTRNLILAYQSFGVVYGDLSTSPLYVYSSTFAGKLHKHQTEEVVFGAFSLIFWTFTLIPLLKYVFIVLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSSHVGAPSPLKRFLERHKTLRTVLLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTEAKLTNGTLLLIACAILVGLFALQHCGTHKVAFMFAPIVIIWLLSIFSIGLYNIIHWNPSIIRAISPHYIIKFFRITGKDGWLSLGGVLLAITGTEAMFADLGHFTALSIRLAFAFVIYPCLVVQYMGQAAFLSKNLDLFPNSFYDSIPEPVFWPIFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFTTTFLMALVIVFVWQKSILLAAPFLIFFWSVEGAYLSAAIIKVPQGGWVPLVLSAIFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGDFENQLILNIAEFIQMEADEPQFSSSESSSIDGRMAVISTRSIQSSLSLIVSGHEEVGTSNSIIHSSKSATLQSLRSVYEDENPQLRRRQVRFQLSPSPSMDPRVREELIDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 873
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 587969 594439 - Lag0027420.1 Lac8g0033 615867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g0033 873 Pfam K+ potassium transporter integral membrane domain 115 604 IPR053951 -
Lac8g0033 873 Pfam K+ potassium transporter C-terminal domain 617 871 IPR053952 -
Lac8g0033 873 NCBIfam potassium uptake protein 115 873 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac8g0033 873 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 110 873 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0638 Lac-Chr10:4911601 Lac8g0033 Lac-Chr8:587969 6.90E-206 dispersed
Lac10g0639 Lac-Chr10:4918953 Lac8g0033 Lac-Chr8:587969 1.50E-213 dispersed
Lac7g2853 Lac-Chr7:47672173 Lac8g0033 Lac-Chr8:587969 4.00E-235 dispersed
Lac8g0033 Lac-Chr8:587969 Lac8g0351 Lac-Chr8:4304917 2.90E-258 dispersed
Lac8g0033 Lac-Chr8:587969 Lac8g2602 Lac-Chr8:43649500 5.20E-255 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g0033 K03549 - csv:101208973 1437.55