Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g0058 ATGGCCATCTCAGAATCTCAATCTCGTTCGTCTCTGATCCCTAATTTCCTCTATTCGTCTTTGGCCATTCAATTCGAGAAGATGCTTTGCTCGAATGTTCCTTGTGGATCGCCATCGCCGATCGTCGAAGCTGCATCTTCCTCCACTTCGATGAAGGCCTTTTCGATTCCGTCTCCGAGTGAACCGAGGAAGAAACTGGAGATGTATTCGCCGGCGTTCTACGCCGCCTGTGCCGTCGGTGGAAGCCTTAGCTGTGGTCTCACTCACATGGCCGTCACTCCTCTCGATCTCGTCAAGTGCAATATGCAGATTGACCCAGTTAAATACAAGAGCATTTCATCAGGTTTTGGAGTTCTGCTAAAGGAGCAAGGAATCAGGGGCCTCTTTAGGGGTTGGGCACCAACTCTAGTAGGTTACAGTGCTCAAGGTGCTTGCAAGTATGGAATATATGAATTCTTTAAGAAATACTATTCCGATATAGCTGGACCAGAGTATGCAGCAAAGTACAAGACCTTGATCTATCTGGCTGGCTCTGCATCTGCTGAAGTGATTGCCGATGTTGCACTTTGCCCTTTGAAGCCGTTAAAGTTAGAGTTCAAACTCAGCCAGGTTTTGCCAGAGGCTTATCAGATGGCCTTCCCAAATTCGTCAGATCTGAAGGTGCCCTTGGGTTGTATAAGGGTCTTGTTCCTCTTTGGGGGCGTCAGATCCCATGTAAATACAATGATGAAGTTTGCAACATTTGAGAATCTCGTGGAGCTCATCTACAAGCATGTAATTCCCAAGCCAAAGAACGAATGCAGTAGCGCCTTGCAGCTCGGCGTCAGCTTTGCTGGTGGATATATTGCTGGCGTCTCTTGTGCTATCGTTTCTCATCCTGCTGATAATCTGGTCTCTTTCCTTAATAATGCTAAAGGGGCTACTGTTGGTGACGCTGTTAAGAAGCTTGGATTATGGGGTCTCTTCACGCGAGGGTTGCCTCTCCGTATAGTCATGGTTGGAACCCTCACTGGAGCTCAGTGGGTCATCTACGATGCATTCAAAGTTTTTGTTGGATTGCCAACTACCGGTGGGGTTGCCCCTGCCGCCACCGCCATTGCTGCATCGCCAGAACTTGCAAGTGCGTAA 1128 48.4 MAISESQSRSSLIPNFLYSSLAIQFEKMLCSNVPCGSPSPIVEAASSSTSMKAFSIPSPSEPRKKLEMYSPAFYAACAVGGSLSCGLTHMAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGLFRGWAPTLVGYSAQGACKYGIYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPLKPLKLEFKLSQVLPEAYQMAFPNSSDLKVPLGCIRVLFLFGGVRSHVNTMMKFATFENLVELIYKHVIPKPKNECSSALQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMVGTLTGAQWVIYDAFKVFVGLPTTGGVAPAATAIAASPELASA 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 899108 903085 + Lag0027445.1 Lac8g0058 615892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g0058 375 SUPERFAMILY Mitochondrial carrier 74 346 IPR023395 -
Lac8g0058 375 Gene3D Mitochondrial carrier domain 28 210 IPR023395 -
Lac8g0058 375 Gene3D Mitochondrial carrier domain 229 353 IPR023395 -
Lac8g0058 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 350 IPR018108 -
Lac8g0058 375 FunFam Phosphate carrier protein, mitochondrial 166 352 - -
Lac8g0058 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 156 IPR018108 -
Lac8g0058 375 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 55 360 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Lac8g0058 375 FunFam Phosphate carrier protein, mitochondrial 58 163 - -
Lac8g0058 375 Pfam Mitochondrial carrier protein 74 159 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac8g0058 Lac-Chr8:899108 Lac8g2062 Lac-Chr8:39120965 2.00E-123 dispersed
Lac3g0033 Lac-Chr3:301474 Lac8g0058 Lac-Chr8:899108 4.00E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g0058 K15102 - csv:101203018 506.908