Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g0070 ATGAATGACGCAGATGTTTCCAAGCAGATCCAGCAGATGGTGAGGTTCATCCGCCAGGAAGCGGAGGAAAAGGCCAACGAGATCTCCGTCTCCGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTTGAGGCAGAGAAGAAGAAGATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATTGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTTCTGCAAGCACAGGATGATGTAGTGAACTCTATGAAAGAGGCAGCTTCAAAGGAACTTCTGAATGTAAGCCAAATTGAACATGTCTACAAGAATCTTTTGAAGGATCTCATTGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTATTGCGATGCCGCAAAGGTGACGTCCATTTGGTGGAGTCTGTGCTGGGTTCAGCAGCAGTTGAATATGCAGAGAAAGCAAAAGTTCACGAGCCAGAGATCATTATTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCACGATCCTTTTTGCTCTGGAGGTGTAGTATTGGCATCTCGAGATGGGAAGATCGTCTGTGAGAACACCCTTGATGCTAGGTTGGATGTTGTGTTCCGTAAAAAACTTCCAGAGCTCCACGGGGAGGTAGGTGCCCCTATCGACTCGATAGTATTTCTGGTGATTTTGGACCACTCCGGTGTACAAGGAGCTGATGAGGACAACTTGGCGAAAATAGGACTGGGAGATGGACCCCAGAGGCGAAACCGGCAAGGGGAACGGGCCAAGACCGAAGGGGTCGGGCTTAAGCCCGACCCCATGCTCGGCCCGCTTGCGCGGGCCGAGTTCTTCCTGCTCCGTTCGACCCCTACCGCCTCTGGCCGCCCTGGTTCCGCATGGGATCTCGAACCCGAACTCTCTACTCTCTCCTCTTACTCTCTAGCTCTCATCCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCCTTGATTTGCAGGCCACGTCTTCCCCTCATCTACAAATTTACTGTTGGTGGCACGTGA 1092 50.64 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLNVSQIEHVYKNLLKDLIVQSLLRLKEPAVLLRCRKGDVHLVESVLGSAAVEYAEKAKVHEPEIIIDHVHLPPGPSHHHHHDPFCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPELHGEVGAPIDSIVFLVILDHSGVQGADEDNLAKIGLGDGPQRRNRQGERAKTEGVGLKPDPMLGPLARAEFFLLRSTPTASGRPGSAWDLEPELSTLSSYSLALILPFSDLSIGGGVASTTPVCRFSLICRPRLPLIYKFTVGGT 363
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 1028665 1033820 + Lag0027457.1 Lac8g0070 615904
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac8g0070 363 Gene3D - 1 62 - -
Lac8g0070 363 Gene3D - 92 224 IPR038495 -
Lac8g0070 363 SUPERFAMILY V-type ATPase subunit E-like 87 220 - -
Lac8g0070 363 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 221 IPR002842 GO:0033178(InterPro)|GO:0046961(PANTHER)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lac8g0070 363 Hamap V-type proton ATPase subunit E [atpE]. 8 225 IPR002842 GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lac8g0070 363 Coils Coil 38 61 - -
Lac8g0070 363 Pfam ATP synthase (E/31 kDa) subunit 16 220 IPR002842 GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lac8g0070 363 MobiDBLite consensus disorder prediction 250 277 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2209 Lac-Chr4:41762059 Lac8g0070 Lac-Chr8:1028665 2.20E-16 dispersed
Lac8g0070 Lac-Chr8:1028665 Lac11g2028 Lac-Chr11:35921469 3.70E-29 dispersed
Lac9g1191 Lac-Chr9:27756284 Lac8g0070 Lac-Chr8:1028665 1.20E-06 dispersed
Lac8g0070 Lac-Chr8:1028665 Lac6g2576 Lac-Chr6:43465293 4.40E-30 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g0070 K02150 - csv:101217221 374.4