Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac8g0105 | ATGGCAGGTCGAGACACAACTTCAGCCGCCATGACATGGCTCTTTTGGCTACTCTCCCATCATCCCAACATCGAGAACCAATTAGTAGAGGAAATAAACTCCGAATCAACCTCAACACTTAAACAAAATTACGAATTCAACTACAAATCTCTCAAGGAGCTCAAATTCCTCAATGCATGTCTATGCGAAACCATGAGAATCTACCCGCCCGTCCCTTGGGATTCCAAGCATGCCATTGCCGACGACTACTTGCCCGACGGGACTCGAGTCGAAGCCGGAGACCGAGTGACGTATTTCCCCTATGGGATGGGGAGAATGGAGGCTCTATGGGGGAAGGACCGATTCGAGTTCAAGCCGAGCCGATGGCTATCGGAGCCGGACGGCCGGGCTCGTAGAAGAGGGGTGAAATTGGTGAGTCCATACAAGTTTCCAATATTTCAGGCAGGGCCTAGGGTGTGTTTAGGAAAAGAGATGGCTTTCATTCAAATGAAGTATGTTGTGGCTTCAATTCTCAGCCAATTCAGAATCAAACCCATTGCCACCAACCATCCTATGTTTGTGCCGCTGTTGACGGCGCACATGGCTGGCGGCTTCAAAGTTTTGTTTCAAAAGAGAGACATAATTTCCAACACTGAACTGACAGACAACAGTGTTGAGAAACATCCATCTCCAACGTGTCAACAACGGATTGCATGA | 696 | 48.42 | MAGRDTTSAAMTWLFWLLSHHPNIENQLVEEINSESTSTLKQNYEFNYKSLKELKFLNACLCETMRIYPPVPWDSKHAIADDYLPDGTRVEAGDRVTYFPYGMGRMEALWGKDRFEFKPSRWLSEPDGRARRRGVKLVSPYKFPIFQAGPRVCLGKEMAFIQMKYVVASILSQFRIKPIATNHPMFVPLLTAHMAGGFKVLFQKRDIISNTELTDNSVEKHPSPTCQQRIA | 231 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 1408709 | 1409404 | + | Lag0027492.1 | Lac8g0105 | 615939 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac8g0105 | 231 | Pfam | Cytochrome P450 | 1 | 182 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g0105 | 231 | SUPERFAMILY | Cytochrome P450 | 1 | 205 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g0105 | 231 | PRINTS | P450 superfamily signature | 2 | 19 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g0105 | 231 | PRINTS | P450 superfamily signature | 144 | 153 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g0105 | 231 | PRINTS | P450 superfamily signature | 153 | 164 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g0105 | 231 | PRINTS | P450 superfamily signature | 59 | 70 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g0105 | 231 | PRINTS | E-class P450 group I signature | 143 | 153 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g0105 | 231 | PRINTS | E-class P450 group I signature | 11 | 37 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g0105 | 231 | PRINTS | E-class P450 group I signature | 153 | 176 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g0105 | 231 | PRINTS | E-class P450 group I signature | 58 | 76 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac8g0105 | 231 | PANTHER | CYTOCHROME P450 | 1 | 198 | - | - | |
| Lac8g0105 | 231 | Gene3D | Cytochrome P450 | 1 | 205 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac6g1606 | Lac-Chr6:22570657 | Lac8g0105 | Lac-Chr8:1408709 | 2.60E-29 | dispersed | |
| Lac7g2817 | Lac-Chr7:47278181 | Lac8g0105 | Lac-Chr8:1408709 | 2.60E-44 | dispersed | |
| Lac3g0089 | Lac-Chr3:593029 | Lac8g0105 | Lac-Chr8:1408709 | 1.00E-38 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac8g0105 | K20665 | - | csv:101207598 | 346.28 |