Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g0138 ATGCTGGTCGGATATAGCAGCTTCCCGGTTCTCTCTCCTTCTGCTGGTTGTCCTCTTGGGTTAGACCACCACCGATGTGCGATCCGAACTGGCAAGCATTCTTCCCTACAGACGGCGCCAACTGTTGATGCCAAAATTTGGCCAAGCAATCCACCTGCCCTTCACGGTTTGGAGGCGTTCTGGGACGAAGCAGGCTGGACCGAGGCAGCTGGAAGCGGTAGGGGCCGAGCGGAGGCAAACGGACTCCTCCCGGTCCTATCTCCTCCCGGTTGTCCTGTCAGCTCCTCATCTTTTCAAAATTTCAAGGTGGCCCTCACAGCTTCGCAGGTTTTCTCGAGCTTGTTCCGCGACCGCGAGTCGCTTGCGTTCAATTCCGCCTGTGGAGGTTCCATAGCATCAACGATGGGAAGGCGATCCATATGGGTTGCTCTTCTCGTCCTCTCTCTTCTTCTTTCGTTGCAACCGCAGAGAGTTTCTTCAACTCTTCCTCTTCAATCATTGATTCAGGGTTCTAAAGATTCTGCCACTGAAAGTACTCCGAAGCAGGATTGGAACAATGCTCATGAGGTACATTGCTCGAGAGAAAGGAGTAGAGCAGCATGGAAAATAATTGAGGAGTATCTAATGCCCTTTGTGGATAAAAAGAAATACAAGATTTCGACAGCGTGTAGGCTTCACCCTGATAATGACATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAACGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTATCTCGATCAGCACTTTGACAATAGACACTATACTTTACTCAATGTGAGTCGAAGCAAGTGCTTGGCAGATGTTTGTGGTGCATTGCACTGTGATCATGTGATAGATACAATATCACAGAAAAGTAAATGCAATCCTGCTGCTGCGGCAAGAAATAAACACATGTGTGAGGCTCTTGCTGACAGTTGTTTTCCTGTTAATGAGGGTGCTTTGGCCAGCCATCTTCACGAATTCTTCTTGCGTCAGTTTTGTGATGCACACACTTGTAGCGGAAAGCCCAAACCTTTCTCCAGAGGTCGACAGGTTAGGACGAGTGGGTTCTACATTGTTATTTCAGTTTTGACAGTCCTTTTCGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAGAGGTATCTTTCCTTTGGCCTACCATCATTTGTATCGGTTCATAAGAGTTTCAACTTTAACTTGACAATCGTGTTCGTCTTAAAGGGGAATGAGAACGAGACCGCAAGTGTTGAAGCGCCTCTCCGAAAGTGGAAGAAAGAAAAAACCGTCATAGATAGAACCTGTTGCCCTTTCAATGATAATATGTAG 1359 46.21 MLVGYSSFPVLSPSAGCPLGLDHHRCAIRTGKHSSLQTAPTVDAKIWPSNPPALHGLEAFWDEAGWTEAAGSGRGRAEANGLLPVLSPPGCPVSSSSFQNFKVALTASQVFSSLFRDRESLAFNSACGGSIASTMGRRSIWVALLVLSLLLSLQPQRVSSTLPLQSLIQGSKDSATESTPKQDWNNAHEVHCSRERSRAAWKIIEEYLMPFVDKKKYKISTACRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYTLLNVSRSKCLADVCGALHCDHVIDTISQKSKCNPAAAARNKHMCEALADSCFPVNEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQVRTSGFYIVISVLTVLFVLFFYVFIYLYKRYLSFGLPSFVSVHKSFNFNLTIVFVLKGNENETASVEAPLRKWKKEKTVIDRTCCPFNDNM 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1720814 1725030 - Lag0027525.1 Lac8g0138 615972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g0138 452 ProSitePatterns Zinc finger C2H2 type domain signature. 249 270 IPR013087 -
Lac8g0138 452 PANTHER ZINC FINGER PROTEIN-RELATED 142 391 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac8g0138 Lac-Chr8:1720814 Lac13g0496 Lac-Chr13:3634930 5.10E-12 dispersed
Lac3g0114 Lac-Chr3:830306 Lac8g0138 Lac-Chr8:1720814 1.80E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g0138 - - - 0.0