Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g0305 ATGAAAGAGAAGAGTGAAAGTGGAGGTGGGTATGTGAGGGCAGATCAGATAGATCTGAAGAGCTTGGACGAGCAGTTACAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAGAAAGGAAGACGAGGAAGGCGGCGGCGGTGGTGGTGGTGCCGGAGGCGGCTTCGGAAGGCCGGCGATCACCAGGCAGGACTGGGAGATTGACCCTTCTAAACTCATCATCAAAAGCGTCATAGCTCGTGGCACTTTTGGAACTGTTCATCGTGGAATTTATGATGGCCAAGATGTTGCTGTTAAACTTCTTGACTGGGGAGAAGAGGGTCATAGGTCGGAGGCAGAAATCGCTTCTCTTAGAGCGGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTTACAAAGTTTATAGGAGCTACAATTGGCTCCTCAGATCTACACATACAAACAGAAAATGGCCAAATTGGCATGCCAAGCAATATTTGTTGTGTCGTCGTTGAATATTGTCCTGGTGGTGCTCTGAAATCTTACCTCATAAAGAACCGGAGGAAAAAGCTGGCTTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCATTCACAGAAGATTGTTCATAGAGATGTCAAAACAGAAAATATGCTTCTGGACAAAACAAGAACGGTAAAAATTGCAGACTTCGGTGTTGCTCGTGTTGAGGCCTCAAATCCCAATGATATGACTGGCGAAACCGGAACCCTTGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTGTGGGAAATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCAGAAGTGACTTCAGCTGTTGTCCGACAGAATCTGAGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTTCAAACGTAATGAAGCGATGTTGGGATGCTAACCCTGACAAGCGTCCAGAGATGGACGAGGTTGTAACCATGTTGGAAGCAATCGACACGTCGAAGGGTGGAGGTATGATCCCCCTCGATCAGTCTCAAGGCTGTTTTTGCTTCCGCAGGTACCGAGGGCCTTGA 1137 47.32 MKEKSESGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKRKEDEEGGGGGGGAGGGFGRPAITRQDWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATIGSSDLHIQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLSNVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPLDQSQGCFCFRRYRGP 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3607110 3610388 + Lag0027692.1 Lac8g0305 616139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g0305 378 CDD STKc_MAP3K-like 81 349 - -
Lac8g0305 378 MobiDBLite consensus disorder prediction 30 48 - -
Lac8g0305 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac8g0305 378 MobiDBLite consensus disorder prediction 30 63 - -
Lac8g0305 378 ProSiteProfiles Protein kinase domain profile. 75 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac8g0305 378 FunFam Serine/threonine-protein kinase HT1 175 360 - -
Lac8g0305 378 Gene3D Phosphorylase Kinase; domain 1 62 159 - -
Lac8g0305 378 SMART serkin_6 75 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac8g0305 378 PRINTS Tyrosine kinase catalytic domain signature 320 342 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac8g0305 378 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac8g0305 378 PRINTS Tyrosine kinase catalytic domain signature 172 185 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac8g0305 378 PRINTS Tyrosine kinase catalytic domain signature 210 228 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac8g0305 378 Pfam Protein tyrosine and serine/threonine kinase 77 349 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac8g0305 378 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 53 350 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Lac8g0305 378 Gene3D Transferase(Phosphotransferase) domain 1 175 365 - -
Lac8g0305 378 FunFam Kinase suppressor of Ras 1 64 159 - -
Lac8g0305 378 SUPERFAMILY Protein kinase-like (PK-like) 61 349 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2252 Lac-Chr4:42223989 Lac8g0305 Lac-Chr8:3607110 4.70E-150 dispersed
Lac7g0715 Lac-Chr7:5779257 Lac8g0305 Lac-Chr8:3607110 4.50E-150 dispersed
Lac8g0305 Lac-Chr8:3607110 Lac9g2245 Lac-Chr9:41820390 4.20E-36 dispersed
Lac3g0697 Lac-Chr3:5403620 Lac8g0305 Lac-Chr8:3607110 1.40E-188 transposed
Lac4g0157 Lac-Chr4:2834852 Lac8g0305 Lac-Chr8:3607110 3.20E-28 wgd
Lac8g0305 Lac-Chr8:3607110 Lac9g1276 Lac-Chr9:29473805 9.20E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86356 PF07714 PK_Tyr_Ser-Thr 2.10E-64 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g0305 - - - 0.0