Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g0351 ATGGATCTGGAGAGTGCTATTAGGGGCCACCCAATCAAGAAAGATTCATGGAGAGCTGTTTTAACTTTGGCTTATCAGAGCTTGGGGGTTGTTTATGGTGATTTGAGCACTTCCCCTTTGTATGTTTACAAAAGCACTTTTGCTGAGGATATTCAGCACTCTGAAACCAACGAGGAGATTTATGGAGTTCTTTCTTTTGTCTTTTGGACTCTCACGCTCATTCCTTTGATTAAGTACGTCTTTATTGTGCTTCGAGCTGATGATAATGGCGAAGGGGGAACTTTCGCTCTGTACTCATTGCTCTGCCGCCATGCCCGAGTTAGCTCCTTGCCCAATTGCCAACTCGCAGATGAGGACCTTTCGGAATATACAAAAGATGGGGTTGAATTAACCAGCAAGAACACTTGTGGGTCGAGATTAAAAACAACATTAGAAAAGCATAGAGTGTTGCAGAGGGTCTTGCTTGTTCTAGCTCTGATCGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACACCTGCAATTTCTGTTTTCTCTGCTGTTTCTGGGCTGGAGCTTTCCATGGCTAAAGAACACCACCGCTATGTCGAAGTCCCAGTTGCTTGTGTCATATTGGTATTCCTGTTTGCACTTCAACATTACGGAACCCATCGAGTCGGGTTTCTGTTTGCACCAGTTGTAATTACCTGGCTCCTGTGTATCAGTGCCATAGGGTTGTACAATATCTTCTACTGGAATCCCCATGTTTACCAAGCACTCTCCCCATATTATATGTACAAATTTCTGAAGAAAACCCAAAGGGGAGGTTGGATGTCCCTTGGCGGGATCCTGTTATGTATGACAGGTTCGGAAGCAATGTTTGCTGATCTCGGGCACTTCTCGCAGCTATCTATCAAGATCGCTTTCTCTTTTGTGGTTTATCCATCTCTAGTCCTGGCATACATGGGACAAGCTGCTTATCTTTCTCAACATCACGGCATGGAAAGTAACTATCGAATCGGATTTTATGTGTCTGTTCCTGAGAAAATAAGATGGCCCGTTCTTGTGATTGCCATTTTAGCCGCTGTTGTAGGAAGTCAAGCTGTCATCACCGGGACTTTCTCGATAATAAAACAATGCTCTGCACTGGGCTGCTTCCCAAGGGTCAAAATTGTTCATACCTCCTCGAAAATCCACGGCCAGATTTATATACCGGAGATCAACTGGACGTTGATGATCTTGTGCTTGGCAATTACTGGTGGCTTTCGAGACACGAAACGGATGGGCAATGCATCAGGTTTGGCAGTGATAACCGTTATGCTAGTGACTACCTGTCTAATGTCTGTAGTCATCATCTTGTGCTGGCACAAAAGCTTTCTCTTTGCCATTGCCTTCATACTCATTTTTGGCTCCATTGAGTCACTCTACTTCTCAGCATCACTCATCAAGTTTCGAGAAGGGGCGTGGGTTCCCATCGCGCTTTCGCTCATCTTCCTAATAGTCATGTATGTATGGCATTACGGAACGCGCAAGAAATACGAGTTTGACGTTCAAAACAAAGTCTCAATCAACTGGCTCCTAGGCCTAGGACCCAGCTTAGGCATTGTGCGAGTACGCGGGATTGGTCTCATATACACCGAGCTTGTCTCAGGAATCCCCGCCATCTTCTCCCACTTCGTAACAAACCTCCCCGCCTTCCACCAAGTCCTAGTCTTCCTCTGCATCAAATCCGTCCCCGTCCCACACGTGAGGCCTGGAGAGAGATTCCTAGTAGGAAGAGTAGGGCCAAAAGAGTACCGTCTCTACCGATGCATAGCGAGATACGGGTACCGCGACATCCACAAGGACGACATGGAGTTCGAGAAGGACCTGGTGTGCAGCATTGCAGAGTTCATCCGGTCGGAGAAGGCGGAAAGCAGCGTGAAGGTAGAAGATGCAGAGGAGAGTGAGAGAATGACAGTGGTGGGGACATGTTCAACACATGTAGATGGAGTGAGAATGTGTGAAGATGAAGAAGGTGGGGAAAGAGCAGCAGCAGCAGCAGAAACATCAGAGGTGAGGGAGATAAAATCACCACAAAAAGTAAGGAAAAGAGTGAGGTTTCTTGTACCAGAGAGCCCAAAAATGGATGTGGAGACAAGGAGGGAACTGCAAGAGCTAATGGAGGCAAGAGAGGCAGGAATGGCTTTCATAATGGGACATTCATATGTCAAAGCAAAGAGGGGATCAGGTTGGGTGAAGAAAGTGGTCATAAATTATGGGTATGATTTTTTGAGAAGGAACTCAAGAGGCCCAAGCTATGCTTGGACTGTGCCTCATGCATCTACTTTAGAGGTGGGGATGATCTACCAAGTTTGA 2337 46.47 MDLESAIRGHPIKKDSWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVSSLPNCQLADEDLSEYTKDGVELTSKNTCGSRLKTTLEKHRVLQRVLLVLALIGACMVIGDGVLTPAISVFSAVSGLELSMAKEHHRYVEVPVACVILVFLFALQHYGTHRVGFLFAPVVITWLLCISAIGLYNIFYWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCMTGSEAMFADLGHFSQLSIKIAFSFVVYPSLVLAYMGQAAYLSQHHGMESNYRIGFYVSVPEKIRWPVLVIAILAAVVGSQAVITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWTLMILCLAITGGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWHKSFLFAIAFILIFGSIESLYFSASLIKFREGAWVPIALSLIFLIVMYVWHYGTRKKYEFDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSEKAESSVKVEDAEESERMTVVGTCSTHVDGVRMCEDEEGGERAAAAAETSEVREIKSPQKVRKRVRFLVPESPKMDVETRRELQELMEAREAGMAFIMGHSYVKAKRGSGWVKKVVINYGYDFLRRNSRGPSYAWTVPHASTLEVGMIYQV 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4304917 4309870 + Lag0027738.1 Lac8g0351 616185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g0351 778 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 778 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac8g0351 778 NCBIfam potassium uptake protein 23 778 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac8g0351 778 Pfam K+ potassium transporter C-terminal domain 533 777 IPR053952 -
Lac8g0351 778 Pfam K+ potassium transporter integral membrane domain 23 519 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0217 Lac-Chr13:1540578 Lac8g0351 Lac-Chr8:4304917 0.00E+00 dispersed
Lac13g1229 Lac-Chr13:10972602 Lac8g0351 Lac-Chr8:4304917 7.30E-277 dispersed
Lac8g0033 Lac-Chr8:587969 Lac8g0351 Lac-Chr8:4304917 2.90E-258 dispersed
Lac8g0351 Lac-Chr8:4304917 Lac8g3091 Lac-Chr8:47547278 1.10E-187 dispersed
Lac8g0351 Lac-Chr8:4304917 Lac8g2602 Lac-Chr8:43649500 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g0351 K03549 - csv:101211664 1439.48