Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g0409 ATGGAGGTTTTGAAGTTCTTCTTCATTCTTTTCTCGACGGCGTCGTTTCTCTCTCTATCGGAATCAGCTCCTCTCACCGCGAATTACTACCAGAAATCCTGCCCCAGATTCACCCAGATTATCCAAGAAACCATCACCAACAAGCAGATCACAAGCCCTTCCACCGCCGCCGGAACTCTCCGCCTCTTCCTCCACGACTGCCTCCCCAACGGCTGCGACGGCTCTGTCCTAATCTCCTCCACTCCCTTCAACAAAGCCGAGCGCGACGCCGACATCAACCTCTCTCTCCCCGGCGACGCATTCGATGTCATCGTTCGGGCCAAGACCGCTCTCGAGCTCGCATGTCCGAACACAGTCTCCTGTGCTGACATTCTCGCCGTCGCCACTCGCGACCTGGTCACCATGGTCGGCGGACCTTATTACAATGTTCTCCTCGGTCGCCGTGACGGCCGTGTGTCGAAAGCTTCGACGATTCCTGGTGCTCTGCCGATGGCTACCTCGCCGATGCCTCAGATTATTGATATTTTTAAAGCTCGGGGGTTTACTGTGCAGGAAATGGTAGCGTTATGTGGTGCTCATACGATTGGATTCTCGCATTGTAAGGAATTCAGCTCTCAGATCTATAATTATAGCAAGTCGTCTTCCTTTGATTCTCAGTATAACCCTAGATTCGCGCAAGGGTTGCAGAAGGCTTGTTCTGGTTTTGAAAAGAATCCTACATTATCGGTTTTCAATGACATTATGACTCCCAACAAGTTTGATAACTCTTACTTCCAGAACCTGCCTAAGGGTTTGGGGATCTTGAAGTCTGATCATGGATTGTATAGCGATTGGAGGACGAGGCCGTTTGTGGAGGCGTATGCGGCGGATGAGAACAAGTTCTTCAAGGATTTTGCTCGGGCGATGGAGAAGTTGAGTAATTATAAAGTTATGACAGGGAATCAAGGGGAGATTCGGCATAGGCTTCAAGCTTTTGAAATGGCAAGCTCACATGGAAGATACTGCCAGAGCCAGACAATGATTGAACAGTCTGCTTCCAGCTATCTGTTTCCATATGCATGA 1062 49.81 MEVLKFFFILFSTASFLSLSESAPLTANYYQKSCPRFTQIIQETITNKQITSPSTAAGTLRLFLHDCLPNGCDGSVLISSTPFNKAERDADINLSLPGDAFDVIVRAKTALELACPNTVSCADILAVATRDLVTMVGGPYYNVLLGRRDGRVSKASTIPGALPMATSPMPQIIDIFKARGFTVQEMVALCGAHTIGFSHCKEFSSQIYNYSKSSSFDSQYNPRFAQGLQKACSGFEKNPTLSVFNDIMTPNKFDNSYFQNLPKGLGILKSDHGLYSDWRTRPFVEAYAADENKFFKDFARAMEKLSNYKVMTGNQGEIRHRLQAFEMASSHGRYCQSQTMIEQSASSYLFPYA 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5201816 5203958 + Lag0027796.1 Lac8g0409 616243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g0409 353 Gene3D Peroxidase, domain 2 163 305 - -
Lac8g0409 353 SUPERFAMILY Heme-dependent peroxidases 25 321 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 FunFam Peroxidase 28 167 - -
Lac8g0409 353 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 FunFam Peroxidase 163 305 - -
Lac8g0409 353 PANTHER - 9 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac8g0409 353 Gene3D - 28 321 - -
Lac8g0409 353 Pfam Peroxidase 43 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac8g0409 353 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0423 Lac-Chr10:3320953 Lac8g0409 Lac-Chr8:5201816 6.40E-105 dispersed
Lac3g0672 Lac-Chr3:5237884 Lac8g0409 Lac-Chr8:5201816 1.70E-105 dispersed
Lac8g0409 Lac-Chr8:5201816 Lac8g2616 Lac-Chr8:43756430 2.80E-130 dispersed
Lac2g2971 Lac-Chr2:47185608 Lac8g0409 Lac-Chr8:5201816 3.50E-91 transposed
Lac4g0621 Lac-Chr4:14704101 Lac8g0409 Lac-Chr8:5201816 2.00E-48 transposed
Lac7g1654 Lac-Chr7:20188180 Lac8g0409 Lac-Chr8:5201816 3.00E-30 transposed
Lac8g0409 Lac-Chr8:5201816 Lac9g1086 Lac-Chr9:25580087 1.00E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g0409 K00430 - csv:101219829 603.594