Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac8g0409 | ATGGAGGTTTTGAAGTTCTTCTTCATTCTTTTCTCGACGGCGTCGTTTCTCTCTCTATCGGAATCAGCTCCTCTCACCGCGAATTACTACCAGAAATCCTGCCCCAGATTCACCCAGATTATCCAAGAAACCATCACCAACAAGCAGATCACAAGCCCTTCCACCGCCGCCGGAACTCTCCGCCTCTTCCTCCACGACTGCCTCCCCAACGGCTGCGACGGCTCTGTCCTAATCTCCTCCACTCCCTTCAACAAAGCCGAGCGCGACGCCGACATCAACCTCTCTCTCCCCGGCGACGCATTCGATGTCATCGTTCGGGCCAAGACCGCTCTCGAGCTCGCATGTCCGAACACAGTCTCCTGTGCTGACATTCTCGCCGTCGCCACTCGCGACCTGGTCACCATGGTCGGCGGACCTTATTACAATGTTCTCCTCGGTCGCCGTGACGGCCGTGTGTCGAAAGCTTCGACGATTCCTGGTGCTCTGCCGATGGCTACCTCGCCGATGCCTCAGATTATTGATATTTTTAAAGCTCGGGGGTTTACTGTGCAGGAAATGGTAGCGTTATGTGGTGCTCATACGATTGGATTCTCGCATTGTAAGGAATTCAGCTCTCAGATCTATAATTATAGCAAGTCGTCTTCCTTTGATTCTCAGTATAACCCTAGATTCGCGCAAGGGTTGCAGAAGGCTTGTTCTGGTTTTGAAAAGAATCCTACATTATCGGTTTTCAATGACATTATGACTCCCAACAAGTTTGATAACTCTTACTTCCAGAACCTGCCTAAGGGTTTGGGGATCTTGAAGTCTGATCATGGATTGTATAGCGATTGGAGGACGAGGCCGTTTGTGGAGGCGTATGCGGCGGATGAGAACAAGTTCTTCAAGGATTTTGCTCGGGCGATGGAGAAGTTGAGTAATTATAAAGTTATGACAGGGAATCAAGGGGAGATTCGGCATAGGCTTCAAGCTTTTGAAATGGCAAGCTCACATGGAAGATACTGCCAGAGCCAGACAATGATTGAACAGTCTGCTTCCAGCTATCTGTTTCCATATGCATGA | 1062 | 49.81 | MEVLKFFFILFSTASFLSLSESAPLTANYYQKSCPRFTQIIQETITNKQITSPSTAAGTLRLFLHDCLPNGCDGSVLISSTPFNKAERDADINLSLPGDAFDVIVRAKTALELACPNTVSCADILAVATRDLVTMVGGPYYNVLLGRRDGRVSKASTIPGALPMATSPMPQIIDIFKARGFTVQEMVALCGAHTIGFSHCKEFSSQIYNYSKSSSFDSQYNPRFAQGLQKACSGFEKNPTLSVFNDIMTPNKFDNSYFQNLPKGLGILKSDHGLYSDWRTRPFVEAYAADENKFFKDFARAMEKLSNYKVMTGNQGEIRHRLQAFEMASSHGRYCQSQTMIEQSASSYLFPYA | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5201816 | 5203958 | + | Lag0027796.1 | Lac8g0409 | 616243 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac8g0409 | 353 | Gene3D | Peroxidase, domain 2 | 163 | 305 | - | - | |
Lac8g0409 | 353 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 321 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | FunFam | Peroxidase | 28 | 167 | - | - | |
Lac8g0409 | 353 | PRINTS | Haem peroxidase superfamily signature | 246 | 261 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Haem peroxidase superfamily signature | 137 | 149 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Haem peroxidase superfamily signature | 119 | 136 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Haem peroxidase superfamily signature | 185 | 200 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | FunFam | Peroxidase | 163 | 305 | - | - | |
Lac8g0409 | 353 | PANTHER | - | 9 | 325 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 326 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | CDD | secretory_peroxidase | 25 | 319 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
Lac8g0409 | 353 | Gene3D | - | 28 | 321 | - | - | |
Lac8g0409 | 353 | Pfam | Peroxidase | 43 | 290 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Plant peroxidase signature | 244 | 259 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Plant peroxidase signature | 260 | 277 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Plant peroxidase signature | 99 | 112 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Plant peroxidase signature | 118 | 128 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Plant peroxidase signature | 137 | 152 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Plant peroxidase signature | 184 | 196 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Plant peroxidase signature | 300 | 313 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lac8g0409 | 353 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g0423 | Lac-Chr10:3320953 | Lac8g0409 | Lac-Chr8:5201816 | 6.40E-105 | dispersed | |
Lac3g0672 | Lac-Chr3:5237884 | Lac8g0409 | Lac-Chr8:5201816 | 1.70E-105 | dispersed | |
Lac8g0409 | Lac-Chr8:5201816 | Lac8g2616 | Lac-Chr8:43756430 | 2.80E-130 | dispersed | |
Lac2g2971 | Lac-Chr2:47185608 | Lac8g0409 | Lac-Chr8:5201816 | 3.50E-91 | transposed | |
Lac4g0621 | Lac-Chr4:14704101 | Lac8g0409 | Lac-Chr8:5201816 | 2.00E-48 | transposed | |
Lac7g1654 | Lac-Chr7:20188180 | Lac8g0409 | Lac-Chr8:5201816 | 3.00E-30 | transposed | |
Lac8g0409 | Lac-Chr8:5201816 | Lac9g1086 | Lac-Chr9:25580087 | 1.00E-68 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac8g0409 | K00430 | - | csv:101219829 | 603.594 |