Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac8g0414 | ATGGCCGCCGCCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCACTCCGATTGCCACCAGCTCGATTTTCTCCCCTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCGGTTTCAAATCCCACGACTGCCCCAAATCCGATCGCGACAGCAGAAAAGTGGTGGTCTGCGAAATCTGCTCGACGTCGATCGAGACCACCGGGAAGGACGGCGGCGACGAGAGGAGGATCCTGGAGAGGCATGAGAAATCGGGAAATTGTGATCCGAGGAAGAAGAAGAAGCCGACGTGTGCGGTGAGGCGGTGCCGGGAAATTCTCACGTTTTCCAATACTTGCGTGTGTAAAACTTGCCGGTTGAAGGTGTGTTTGAAGCACCGGTTTCCGGCGGAGCATGGCTGTGGACGGTCGTCTACGGCGGCAGCGGCGGTGGTGGATGGGGGCCGGTGGAATGAAAAGTTTATGACGGCTTTGGAGTTGAGGAGTAGCGGTGATTGTGGGAAGAGGGAACGCTCGACGGCGGGCAACGGTTCTCCGACTGCCTCCCCATCTGTTAAAGCTTGTTGA | 585 | 57.95 | MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRDSRKVVVCEICSTSIETTGKDGGDERRILERHEKSGNCDPRKKKKPTCAVRRCREILTFSNTCVCKTCRLKVCLKHRFPAEHGCGRSSTAAAAVVDGGRWNEKFMTALELRSSGDCGKRERSTAGNGSPTASPSVKAC | 194 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 5258953 | 5259629 | + | Lag0027801.1 | Lac8g0414 | 616248 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac8g0414 | 194 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 9 | 169 | - | GO:0005737(PANTHER) | |
| Lac8g0414 | 194 | Gene3D | - | 2 | 70 | IPR035896 | - | |
| Lac8g0414 | 194 | ProSiteProfiles | Zinc finger AN1-type profile. | 11 | 59 | IPR000058 | GO:0008270(InterPro) | |
| Lac8g0414 | 194 | ProSiteProfiles | Zinc finger AN1-type profile. | 98 | 148 | IPR000058 | GO:0008270(InterPro) | |
| Lac8g0414 | 194 | MobiDBLite | consensus disorder prediction | 171 | 194 | - | - | |
| Lac8g0414 | 194 | Gene3D | - | 80 | 153 | IPR035896 | - | |
| Lac8g0414 | 194 | SUPERFAMILY | AN1-like Zinc finger | 10 | 54 | IPR035896 | - | |
| Lac8g0414 | 194 | SUPERFAMILY | AN1-like Zinc finger | 64 | 145 | IPR035896 | - | |
| Lac8g0414 | 194 | Pfam | AN1-like Zinc finger | 104 | 142 | IPR000058 | GO:0008270(InterPro) | |
| Lac8g0414 | 194 | Pfam | AN1-like Zinc finger | 17 | 55 | IPR000058 | GO:0008270(InterPro) | |
| Lac8g0414 | 194 | SMART | AN1_Zf_4 | 104 | 145 | IPR000058 | GO:0008270(InterPro) | |
| Lac8g0414 | 194 | SMART | AN1_Zf_4 | 17 | 56 | IPR000058 | GO:0008270(InterPro) | |
| Lac8g0414 | 194 | MobiDBLite | consensus disorder prediction | 179 | 194 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac1g1255 | Lac-Chr1:32154266 | Lac8g0414 | Lac-Chr8:5258953 | 2.00E-33 | dispersed |
Pathway information