Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g0682 ATGGCCGCCGCGGTAGGGTTCTGCCTCAAACTTTTAACCGGACGGTGGCTGATACTATTCGCATCACTAACAATCATGGCAATGAACGGGTCAGGCTACATGTTCGGCCTGTACTCCAACCACATCAAATCCTTTTTCGGTTACGATCAATCGGCTCTGAATTTGGTCAGCTTCTTCAAGGACCTGGGCGCCAATCTCGGGGTCCTTTCGGGGCTGCTCTACGAGGTGGCGCCGCCGTGGTTGGTTCTCTCTGTCGGCGCAGCCCTCAACTTCATTGCTTACTTCATGGTTTGGGCGGCCATTTCTGGCCGGACCGCCGCGCCGGGGCTCTGGTTAATGTGCCTCTATATGGGTGTTGCTGCTAACTCCTTGTCTTTTTCTAATACAGCGGCTTTGGTTACTTGTGTTCGGAACTTTCCTCAGTATCGTGGCTGCCTTTTGGGGCTCCTTAAAGGGTACATAGGTTTAAGTGGCGCAATAATGACGCAGCTCTACCATGCCATGTATGGAGACGACTCGAAATCCCTTATTTTGCTGATTGCTTGGCTCCCAGCCGTCGTTTCCTTAGCTTCCCTTCCGGTGATTCGATTGATAAACGCCAACAACCAACAACCCAATGACGACCTCAAAGCTTTCTACGCCCTTCTCTACATATCCCTCGGCCTTGCAGCTTCTCTCATCGCCATTATCATCGCTCAAACCAAGCTACAATTCTCTAAAGCCGAGTACATCGCTGCTGCTTCTCCAGTCATTCTCTTCCTTCTCCTCCCACTCGCGGTCGTCGTAAACCAAGAACTCAAGCTCCCCAAAACCACCGTCGACAACCCGCCGCAGTCAACGGTTCTAGTAGAACCGCCGCAGATGAGTTGGTATAAAAACATCTTCAACCGGCCACCACCAGGTGAGGACCACACCATCTTGCAAGCAATTTTGAATGTGGACATGTTGATTCTATTCATTGCGACGACGTGTGGCGTTGGAGGAGCTCTGACAGTGGTGGACAACTTGGCTCAGATCGGAGCCTCGTTGCATTATCCACCTCGCAGCATTTCAACTTTCGTTTCGCTTCTGAGCATTTGGAACTTCCTCGGTCGCGTGGTCGCCGGCTATGCTTCTGAATTTCTGTTAATAAACTACAGATTACCCCGCCCGTTGATGCTCACTGCCGTGATTCTTCTCTCTTCCTTTGGCCATGTTCTCATCGCCTTCGCCGTCCCCAACTCTCTCTATTTGGCTTCCATGATCACTGGATTCTCCTTGGGCGCCCAGCTGCCGCTAACGGCGATAATAATATCGGAGCTTTTCGGGTTGAAACACTACTCAACGTTGTACAATGTGGGATCAGTATCGAGCCCTGTTGGATCCTACATTTTCAATGTGAGAGTGGCCGGTCGGTTGTATGACAGAGAGGGGGAAAGGCAGAATGCGGAGATGGGACTGGTGAGGAAAGCGGGGCAGGAGTTGATGTGCAGAGGCGCGACGTGTTATAGAGTTAGTTTTCTTGTAATGATGGCGGCTTCTGCTTTTGGGAGTTTGGTTTCGGTGGTGTTGGTGCTTCGGACGAGGGGTTTTTACAGAGGTGATATTTATGGAAGGTTTAAAAAGGTCCAAGGAGAAAACGAAGAAATAGCAGGCACTGCTCTTTCCACTCCTACTCAAGGGCTTACAAAAGAGGAGAAATGA 1683 50.68 MAAAVGFCLKLLTGRWLILFASLTIMAMNGSGYMFGLYSNHIKSFFGYDQSALNLVSFFKDLGANLGVLSGLLYEVAPPWLVLSVGAALNFIAYFMVWAAISGRTAAPGLWLMCLYMGVAANSLSFSNTAALVTCVRNFPQYRGCLLGLLKGYIGLSGAIMTQLYHAMYGDDSKSLILLIAWLPAVVSLASLPVIRLINANNQQPNDDLKAFYALLYISLGLAASLIAIIIAQTKLQFSKAEYIAAASPVILFLLLPLAVVVNQELKLPKTTVDNPPQSTVLVEPPQMSWYKNIFNRPPPGEDHTILQAILNVDMLILFIATTCGVGGALTVVDNLAQIGASLHYPPRSISTFVSLLSIWNFLGRVVAGYASEFLLINYRLPRPLMLTAVILLSSFGHVLIAFAVPNSLYLASMITGFSLGAQLPLTAIIISELFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRLYDREGERQNAEMGLVRKAGQELMCRGATCYRVSFLVMMAASAFGSLVSVVLVLRTRGFYRGDIYGRFKKVQGENEEIAGTALSTPTQGLTKEEK 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12361773 12364799 - Lag0028069.1 Lac8g0682 616516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g0682 560 SUPERFAMILY MFS general substrate transporter 15 525 IPR036259 -
Lac8g0682 560 Pfam Nodulin-like 15 262 IPR010658 -
Lac8g0682 560 Gene3D MFS general substrate transporter like domains 311 523 IPR036259 -
Lac8g0682 560 CDD MFS_Mch1p_like 14 510 - -
Lac8g0682 560 Pfam Major Facilitator Superfamily 336 522 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Lac8g0682 560 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 533 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0647 Lac-Chr3:5038413 Lac8g0682 Lac-Chr8:12361773 2.20E-83 dispersed
Lac3g0648 Lac-Chr3:5043189 Lac8g0682 Lac-Chr8:12361773 1.90E-87 dispersed
Lac4g1331 Lac-Chr4:31461332 Lac8g0682 Lac-Chr8:12361773 6.40E-20 dispersed
Lac8g0682 Lac-Chr8:12361773 Lac8g2375 Lac-Chr8:41858954 3.90E-163 dispersed
Lac10g1494 Lac-Chr10:14801630 Lac8g0682 Lac-Chr8:12361773 1.10E-46 wgd
Lac7g2497 Lac-Chr7:42905394 Lac8g0682 Lac-Chr8:12361773 2.40E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g0682 - - - 0.0