Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac8g0987 | ATGGAGGTTCTGAGAAGAAGGGTTGGCGGCGGTAGGCTGCTGCAGGCGGTGGTAGTGGCGGCGGCGACGGTGGTGCTGCTGCTGGCGGCGGTGCCGAATGTTTCGGCGACACGGTGGACTGTTGGTGGCAACATGGGGTGGACGACCAATTTTAACTACACTATCTGGGCTCAGGAGAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAGTTGCAATTCAGATCACCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCCTATTACTTCATAAGTGGCAAGGGCTTTTGCTTTGGAGGCATGAAGCTCGCTATTCACGTCGAACACCTACCGCCCCCGCCCTCGACCTCGCCCTTGAATGAGAAGAGCAGTTCTCCAAGATCTAGCCACATTGCCCACACCCCATTCCTTTTCACCGCTGTTTTCGCCATCGCTGCTCTACGGGAAGCTTTGGCCCGGATCTGGTAG | 552 | 53.26 | MEVLRRRVGGGRLLQAVVVAAATVVLLLAAVPNVSATRWTVGGNMGWTTNFNYTIWAQEKHFYYDDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCFGGMKLAIHVEHLPPPPSTSPLNEKSSSPRSSHIAHTPFLFTAVFAIAALREALARIW | 183 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 19851211 | 19852590 | - | Lag0028374.1 | Lac8g0987 | 616821 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac8g0987 | 183 | PANTHER | BLUE COPPER PROTEIN | 26 | 142 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
| Lac8g0987 | 183 | Pfam | Plastocyanin-like domain | 47 | 129 | IPR003245 | GO:0009055(InterPro) | |
| Lac8g0987 | 183 | SUPERFAMILY | Cupredoxins | 36 | 135 | IPR008972 | - | |
| Lac8g0987 | 183 | ProSiteProfiles | Phytocyanin domain profile. | 37 | 137 | IPR003245 | GO:0009055(InterPro) | |
| Lac8g0987 | 183 | FunFam | Lamin-like protein | 35 | 138 | - | - | |
| Lac8g0987 | 183 | Gene3D | - | 35 | 138 | IPR008972 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac3g1248 | Lac-Chr3:10658134 | Lac8g0987 | Lac-Chr8:19851211 | 1.80E-26 | dispersed |
Pathway information