Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac8g1175 | ATGGCGGCGTCTACTAAAATCGTTCCGATTAGCCAACATCCGTGTTCTTCTTCTTCTTCTTCTGTGACCATCTCCGCTACCGTAGACACAATGTTGGTCAAAGAAGATGGTAAGGATGGAAAGAAACAGCCCTCTCTTCTCCGGCGGACAAGCCAAGCCACCGCCGCCGGCAACTTCAACCACCAGACACGGCGGCAAGTCTCCGGCCAAAGTTCATTGGGCCACAGTGTTGGGTATGCTGTGGCCATTGCATTTCTGCCGGTGTGCATATGTTTTAAAGTTCTGCGATACCTTTGGATAGGCTACAAATGGATAGCAAGATTTCTATCCCTTGGATGTTATGCGGTTCTTATTTTCCCTGGTTTTCTTCAAGCTGCATATTATTATCTTTACTCTGGCCAGATTCGAAGAAGCATAAAGTATGGTGATCAACCAAGAAATAGGTTGGATCTATATATACCAAAAACTGGGGATGGGCAAAAGCCAAGGCCAGTGGTTGCATTTGTAACTGGTGGAGCCTGGATTATAGGTTATAAAGCATGGGGTTGTCTTCTCGGATCACAGTTATCAGAGAGAGGCATTGTAGTAGCCTGCCTTGATTACAGAAATTTCCCCCAAGGAACCATGAGTGATATGATAAAGGATGCTTCTCAAGGCATCTCATTCGTATTCAATAATATTGCCGAGTATGGTGGAGATCCTAACAGGATTTATCTAATGGGACAGTCAGCTGGTGCACATATTGCTGCTTGCACACTTGTAGAGCAGGCAATCAAAGAAGCAGGTGGTGAGAGAGTTTCTTGGAGTGTCTCCAGGATAAAAGGTTTCTTTGGTTTGTCAGGGGGAGAGTTGTGGAACGATCACAGTTAA | 870 | 45.4 | MAASTKIVPISQHPCSSSSSSVTISATVDTMLVKEDGKDGKKQPSLLRRTSQATAAGNFNHQTRRQVSGQSSLGHSVGYAVAIAFLPVCICFKVLRYLWIGYKWIARFLSLGCYAVLIFPGFLQAAYYYLYSGQIRRSIKYGDQPRNRLDLYIPKTGDGQKPRPVVAFVTGGAWIIGYKAWGCLLGSQLSERGIVVACLDYRNFPQGTMSDMIKDASQGISFVFNNIAEYGGDPNRIYLMGQSAGAHIAACTLVEQAIKEAGGERVSWSVSRIKGFFGLSGGELWNDHS | 289 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 25026730 | 25031090 | + | Lag0028562.1 | Lac8g1175 | 617009 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac8g1175 | 289 | SUPERFAMILY | alpha/beta-Hydrolases | 112 | 254 | IPR029058 | - | |
| Lac8g1175 | 289 | Gene3D | alpha/beta hydrolase | 128 | 288 | IPR029058 | - | |
| Lac8g1175 | 289 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Lac8g1175 | 289 | PANTHER | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C | 56 | 281 | IPR050300 | GO:0016298(PANTHER) | |
| Lac8g1175 | 289 | Pfam | BD-FAE | 149 | 257 | IPR049492 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac11g0190 | Lac-Chr11:1792216 | Lac8g1175 | Lac-Chr8:25026730 | 1.10E-72 | dispersed | |
| Lac13g0443 | Lac-Chr13:3163935 | Lac8g1175 | Lac-Chr8:25026730 | 1.20E-80 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac8g1175 | K15889 | - | csv:101213470 | 366.311 |