Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g1415 ATGCCCCCAAGAAACCTTCTCGTTTTCGCCCTTTTCCTCGTTCTCTTCCCCCCACTGAAAGTACAGAGCATCGGCTTCGATTTCACTTCTTTCAACATCAGAAACCTCACTCTCCTCGGCGATTCCCACCTCCGCGACGGCGTAATCGGCCTCACCAAGGAGCTCGGCGTCCCTTCCTCGAGCGCCGGCGCCGTTATTTACAACAAACCCATCGGATTTTACGACGCCGATTCCAACATCACCGCCTCTTTCTCCACAAGATTCTCCTTCTCCATCACCAACATCAACCCCACTTCCTTCGGCGATGGCCTTTCCTTCTTCCTCTCGCCTGATAATCAGACCCTCGGCAGTCCAGGTGGGTATTTGGGGCTCGTCAATTCCTCCCAATTGACCAAGAACAAGTTTGTGGCCGTTGAGTTTGATACGCGCCTCGATTCTTACTTCGGTGATCCCAATGACCATCATGTTGGTTTGGACATCGAGAGCTTGATTATGATCAAGACGGCCAACCCTGTTTCTCAGGGGGTCAATCTCAAGTGTGGCAAGTTGATTACGGCTTGGATTGAGTACAAGAATGAGGAGGGTAGGTTGAGGGTCTTCTTGAGTCATTCTGCTTTGAAGCCTCCCAAAGCGCTTCTCGAAGTCGATGTCGATCTTTCGAGCTATCTCAAGGAGGTTATGTATGTCGGGTTTTCGGGTTCGACTGAAGGGAGTACTGAGCTTCATTTGATTCAGAGTTGGAGCTTTTATACTTCTGGGTTTGTTCCTGCTAGGCCTAAATTTAATCCTCATAATGTTTCTGATAGCTCTGTGATTGTTTCTCCTAATATTTCTATATCTGATTCTGGCAATGGACATCGTAGTAGGCTCGGGTTGGGTCTCGGCATCGCTGGACCGGCCTTCTTCTGTGATGTGATTGCTGTGTTTGGTTTCTTTTCGCTTAGGAAATGGAGGAAGATTAGGACTCAGAAGAGCTTCAAGGCGGAGCTTTTGACAGGTCCTAGAGAGTTTAGATATAAAGAACTTAAGACAGCCACAAAAGGGTTTCACTCCAGTAGGATCATTGGCAATGGAGCTTTTGGGACTGTCTATAAAGCTTTTTTCATCTCATCCGGAACTATTTCGGCGGTCAAAAGATCGAAGCATTCCCACGAAGGGAAGACCGAGTTCCTGGCTGAGTTATCGATCATAGCTCGGTTGAGGCACAAGAATTTGGCTCAGCTCCAAGGTTGGTGTGTCGAGAAGGACGAACTGTTGCTTGTTTACGACTTTATGCCGAATGGAAGCCTTGATAGGCTGCTTTACCAGGAATCAGGAGAAGCTAGCTTGTTAAACTGGTCTCACAGATTCAACGTTGCTGTTGGGTTGGCCTCTCTGTTGACATATCTACATCAGGAATGTGAGCAGCAGGTCATCCACAGAGATATAAAGACTGGTAATGTACTGCTGGATGGGAACTTCAATGCGAGATTGGGCGATTTTGGATTGGCGAAGCTCATGGATCACGACAAGAGCCCGGTTTCGACTCTAACTGCAGGAACAATGGGATACCTTGCACCTGAGTACCTTCAATATGGGAAAGCGACTGAGAAAACCGACGTCTTCAGCTACGGTGTGGTTATCCTCGAAGTGGCCTGTGGGAGGAGGCCGATCGAAAGAGAAGCAGGTACTCAAAAGATGGTCAATCTGGTAGATTGGGTTTGGGGTTTGCATTCTCATGGCAAGATCATCGAAGCAGCCGATAAAAGGTTGAACGGGGAGTTCAGGGAAGAAGAAATGAGGAAGCTGTTACTCGTCGGATTGAGCTGTGCAAACCCAGATAGCTCGGTGAGGCCTTCGATGAGGAAGGTCCTACAGATTCTCAACAATGAGGCAGAGCCGGTGTTCGTACCGAAAATGAAGCCTAGTCTAACATTTTCTTGTGGCTTTTCACTGACTGTGGATGACATTATAGTAGAGGAAGGAGGAGAATGGGAATCTTCAAAGACGACCGTTGTCCAAATAGACTGA 2010 48.01 MPPRNLLVFALFLVLFPPLKVQSIGFDFTSFNIRNLTLLGDSHLRDGVIGLTKELGVPSSSAGAVIYNKPIGFYDADSNITASFSTRFSFSITNINPTSFGDGLSFFLSPDNQTLGSPGGYLGLVNSSQLTKNKFVAVEFDTRLDSYFGDPNDHHVGLDIESLIMIKTANPVSQGVNLKCGKLITAWIEYKNEEGRLRVFLSHSALKPPKALLEVDVDLSSYLKEVMYVGFSGSTEGSTELHLIQSWSFYTSGFVPARPKFNPHNVSDSSVIVSPNISISDSGNGHRSRLGLGLGIAGPAFFCDVIAVFGFFSLRKWRKIRTQKSFKAELLTGPREFRYKELKTATKGFHSSRIIGNGAFGTVYKAFFISSGTISAVKRSKHSHEGKTEFLAELSIIARLRHKNLAQLQGWCVEKDELLLVYDFMPNGSLDRLLYQESGEASLLNWSHRFNVAVGLASLLTYLHQECEQQVIHRDIKTGNVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVACGRRPIEREAGTQKMVNLVDWVWGLHSHGKIIEAADKRLNGEFREEEMRKLLLVGLSCANPDSSVRPSMRKVLQILNNEAEPVFVPKMKPSLTFSCGFSLTVDDIIVEEGGEWESSKTTVVQID 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30899266 30901275 + Lag0028802.1 Lac8g1415 617249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g1415 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac8g1415 669 ProSitePatterns Legume lectins beta-chain signature. 136 142 IPR019825 -
Lac8g1415 669 SMART serkin_6 349 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac8g1415 669 FunFam L-type lectin-domain containing receptor kinase VIII.1 22 262 - -
Lac8g1415 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 257 IPR013320 -
Lac8g1415 669 SUPERFAMILY Protein kinase-like (PK-like) 332 642 IPR011009 -
Lac8g1415 669 ProSiteProfiles Protein kinase domain profile. 349 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac8g1415 669 CDD lectin_legume_LecRK_Arcelin_ConA 26 253 IPR001220 GO:0030246(InterPro)
Lac8g1415 669 FunFam L-type lectin-domain containing receptor kinase VIII.1 313 424 - -
Lac8g1415 669 FunFam L-type lectin-domain containing receptor kinase VIII.1 425 639 - -
Lac8g1415 669 Pfam Legume lectin domain 25 256 IPR001220 GO:0030246(InterPro)
Lac8g1415 669 PANTHER - 36 631 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Lac8g1415 669 Pfam Protein kinase domain 349 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac8g1415 669 Gene3D - 21 261 - -
Lac8g1415 669 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524(InterPro)
Lac8g1415 669 Gene3D Phosphorylase Kinase; domain 1 312 424 - -
Lac8g1415 669 Gene3D Transferase(Phosphotransferase) domain 1 425 640 - -
Lac8g1415 669 CDD STKc_IRAK 355 623 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac8g1415 Lac-Chr8:30899266 Lac9g1517 Lac-Chr9:33816398 4.20E-103 dispersed
Lac10g2084 Lac-Chr10:29993724 Lac8g1415 Lac-Chr8:30899266 8.10E-07 transposed
Lac10g3029 Lac-Chr10:44857732 Lac8g1415 Lac-Chr8:30899266 9.90E-167 transposed
Lac12g0431 Lac-Chr12:4767300 Lac8g1415 Lac-Chr8:30899266 8.30E-107 transposed
Lac1g1911 Lac-Chr1:40825031 Lac8g1415 Lac-Chr8:30899266 2.90E-13 transposed
Lac11g1804 Lac-Chr11:32561847 Lac8g1415 Lac-Chr8:30899266 4.50E-40 wgd
Lac4g1255 Lac-Chr4:30380030 Lac8g1415 Lac-Chr8:30899266 3.30E-43 wgd
Lac8g1415 Lac-Chr8:30899266 Lac9g1508 Lac-Chr9:33624294 9.90E-97 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86359 PF00069 Pkinase 4.20E-49 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g1415 - - - 0.0