Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g1491 ATGCTTGTGGGTCTGTTTCTCATTCTTCTTTGCTGCTCTGATTGTCTTCTTCTTGTGAGTTCTTTGAATGATGAAGGGTTTGTGCTTTTGTCACTCAAGCAGTCCATTTCTCAAGACCCTGATGGGGCTTTGAGCAATTGGGATTCTTCTGATGAAACCCCTTGTTCTTGGAATGGAGTTGGTTGTGTGGAGGAAACTGTTGTTTCTGTTAGTTTTCCTAAGAAGAATTTGTATGGGTTTCTTCCTTCTGCTCTTGGGGCTCTCTCTGGCCTTCGCCATGTGAATTTGAGGAACAATAGGCTTTTTGGGAGCTTGCCTTTTCAGCTCTTCTCCGCTCAAGGGCTACAGAGCTTGGTTCTTTATGGCAATTCCTTTTCTGGGTCTGTTCCAAATGGGATTGGGAAGCTTAAATTCCTTCAAACTCTGGATTTGTCTCGAAATTTCTTTAATGGGTCATTGCCCACTTCGATTATTCAATGCAAGAGGCTTAAAACCCTTGATGTTAGTCAGAATAACTTCACTGGTTCATTGCCACATGGGTTTGGAACTAGTTTGAGTTCTTTGGAGAAACTGGATCTTTCATTTAACAGCTTTGATGGTTCTCTTCCTAGTGATTTGGGGAATTTGTCTAGCTTACAAGGAACTTTTGACTTGTCTCATAATCTTTTTTCTGGTTTGATTCCTACTAGCCTTGGAAACCTACCAGAAAAGGTTTACATTGATCTTAGCTATAACAATTTGAGTGGTCCAATACCCCAAAATGGTGCTCTGATGAACAGAGGACCCACTGCTTTTATTGGGAATTCTGGGCTCTGTGGTTCCCCATTGAAGAACACATGTTCTTCAGAAGCTCTAAGTGCAAGCTCACCGTCGTTGCTTCCGTTTCTCCCGGACGATCGTTCGCCTGGGATATCTGGTGACAATGCTGAGAAAGCCAGGGGATTAAGTAAGAGTGCTGTGATTGCAATAGTACTTGGTGATGTGGTTGGCATATGTCTAGCTGGGTTATTGTTCTCATATTGTTATTCTAGAGTGTGTAGTCCAAGAAAGAGCAAAGACGAGAGTGCGCATAGTTCTGATAAGGGGAAAGGAAGGAACGAGTGTTTATGCTTCAGGAAGGATGAATCCGAGACGGTTTCGCAGAATGTGGAGCAGTATGATCTTGTGCCTTTGGATGCACAAGTTGAATTTGATCTTGATGAACTTCTCAAGGCATCAGCATTTGTTCTTGGCAAAAGTGGGATTGGGATAGTGTACAAAGTGGTGCTTGAAGATGGAGTTACGTTGGCCGTGCGACGGTTAGGCGAAGGCGGTTCTCAAAGGTTCAAAGAGTTTCAAACAGAAGTAGAAGCAATAGCAAAGCTAAGGCATCCTAATCTTGTCACTCTTAGAGCCTATTACTGGTCTGTTGAAGAGAAGCTGCTCATTTATGATTTCATACCCAATGGAAACCTTGCCATTGCCATTCATGGAAAGCCAGGAATGGTAGATTTCACGCCGTTATCCTGGCCTGCGAGGTTAAAGATCATGGAAGGAATTGCAAAAGGAATGGTCTATCTCCATGAATTCAGCCCCAAGAAGTATGTTCATGGAGATTTGAAACCCAACAACATACTTCTCACTCAGAACATGGAAGCCAAAATTTCCGACTTCGGCCTTGCTCGACTTGCCAACATTGCAGGAGGAACCCCAACCTTACAATCAAGTCGAGTGGCATCCGAGAAACCGTTAGATCCAAAGCAACCGAAGACCGTAACATCCGAAACCGTTTGCAGTTCATCTTCCAACACAGGAACTTGTTATCAGGCCCCTGAATCACTCAAAGTCTTAAAACCATCCCAAAAATGGGATGTTTACTCATATGGTGTAATCTTACTTGAAATGATCACTGGAAGATTCCCACTAATCCAAGTGAGTTCTTCCTCTGAAATGGATCTTGTCCATTGGATTCAACTCTGCATTGAAGAACAAAAGCCACTTTCAGAAGTCATAGATCCATATCTAGTTCAAGATGCAGATAAAGAAGAAGAGTTCATATCTGTACTCAAAATTGCAATGGCCTGTGTTCATGGGAGCCCTGAAAGGAGACCTTCCATGAGACACATCTCCGACGTCCTCGAAAGGGTATCATCGGCGTCGAGGAATTAA 2148 43.2 MLVGLFLILLCCSDCLLLVSSLNDEGFVLLSLKQSISQDPDGALSNWDSSDETPCSWNGVGCVEETVVSVSFPKKNLYGFLPSALGALSGLRHVNLRNNRLFGSLPFQLFSAQGLQSLVLYGNSFSGSVPNGIGKLKFLQTLDLSRNFFNGSLPTSIIQCKRLKTLDVSQNNFTGSLPHGFGTSLSSLEKLDLSFNSFDGSLPSDLGNLSSLQGTFDLSHNLFSGLIPTSLGNLPEKVYIDLSYNNLSGPIPQNGALMNRGPTAFIGNSGLCGSPLKNTCSSEALSASSPSLLPFLPDDRSPGISGDNAEKARGLSKSAVIAIVLGDVVGICLAGLLFSYCYSRVCSPRKSKDESAHSSDKGKGRNECLCFRKDESETVSQNVEQYDLVPLDAQVEFDLDELLKASAFVLGKSGIGIVYKVVLEDGVTLAVRRLGEGGSQRFKEFQTEVEAIAKLRHPNLVTLRAYYWSVEEKLLIYDFIPNGNLAIAIHGKPGMVDFTPLSWPARLKIMEGIAKGMVYLHEFSPKKYVHGDLKPNNILLTQNMEAKISDFGLARLANIAGGTPTLQSSRVASEKPLDPKQPKTVTSETVCSSSSNTGTCYQAPESLKVLKPSQKWDVYSYGVILLEMITGRFPLIQVSSSSEMDLVHWIQLCIEEQKPLSEVIDPYLVQDADKEEEFISVLKIAMACVHGSPERRPSMRHISDVLERVSSASRN 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 32253089 32255335 + Lag0028878.1 Lac8g1491 617325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g1491 715 Pfam Protein kinase domain 410 702 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac8g1491 715 CDD STKc_IRAK 410 708 - -
Lac8g1491 715 SMART serkin_6 409 679 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac8g1491 715 Pfam Leucine Rich Repeat 139 159 IPR001611 GO:0005515(InterPro)
Lac8g1491 715 Pfam Leucine Rich Repeat 162 182 IPR001611 GO:0005515(InterPro)
Lac8g1491 715 Pfam Leucine Rich Repeat 115 136 IPR001611 GO:0005515(InterPro)
Lac8g1491 715 Pfam Leucine Rich Repeat 187 209 IPR001611 GO:0005515(InterPro)
Lac8g1491 715 Pfam Leucine Rich Repeat 216 234 IPR001611 GO:0005515(InterPro)
Lac8g1491 715 FunFam Leucine-rich repeat receptor-like protein kinase 22 179 - -
Lac8g1491 715 Gene3D Ribonuclease Inhibitor 77 283 IPR032675 -
Lac8g1491 715 Gene3D Ribonuclease Inhibitor 18 76 IPR032675 -
Lac8g1491 715 FunFam Os07g0541700 protein 489 573 - -
Lac8g1491 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac8g1491 715 ProSiteProfiles Protein kinase domain profile. 404 709 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac8g1491 715 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Lac8g1491 715 Gene3D Phosphorylase Kinase; domain 1 371 479 - -
Lac8g1491 715 PANTHER OS05G0588300 PROTEIN 133 711 IPR050994 -
Lac8g1491 715 SMART LRR_typ_2 185 209 IPR003591 -
Lac8g1491 715 SMART LRR_typ_2 136 160 IPR003591 -
Lac8g1491 715 SMART LRR_typ_2 88 112 IPR003591 -
Lac8g1491 715 Gene3D Transferase(Phosphotransferase) domain 1 480 715 - -
Lac8g1491 715 SUPERFAMILY Protein kinase-like (PK-like) 409 706 IPR011009 -
Lac8g1491 715 FunFam Leucine-rich repeat receptor-like protein kinase 387 479 - -
Lac8g1491 715 SUPERFAMILY L domain-like 23 277 - -
Lac8g1491 715 FunFam Leucine-rich repeat receptor-like protein kinase 187 282 - -
Lac8g1491 715 MobiDBLite consensus disorder prediction 566 590 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1157 Lac-Chr1:29962108 Lac8g1491 Lac-Chr8:32253089 6.10E-67 dispersed
Lac5g2569 Lac-Chr5:44238429 Lac8g1491 Lac-Chr8:32253089 9.80E-80 dispersed
Lac8g1491 Lac-Chr8:32253089 Lac8g3004 Lac-Chr8:46880294 6.20E-129 dispersed
Lac13g0064 Lac-Chr13:467647 Lac8g1491 Lac-Chr8:32253089 5.80E-111 transposed
Lac10g3254 Lac-Chr10:46565625 Lac8g1491 Lac-Chr8:32253089 1.10E-40 wgd
Lac10g1651 Lac-Chr10:17994585 Lac8g1491 Lac-Chr8:32253089 6.20E-21 wgd
Lac13g0530 Lac-Chr13:3875933 Lac8g1491 Lac-Chr8:32253089 1.50E-212 wgd
Lac13g1546 Lac-Chr13:16031946 Lac8g1491 Lac-Chr8:32253089 3.00E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86360 PF00069 Pkinase 5.00E-33 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g1491 - - - 0.0