Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac8g1626 | ATGGAACATCTCTTGGGTCTTCTCCGAATTCGGGTGCAGCGCGGTGTTAACCTCGCTGTTCGTGATACTCGTAGCAGCGATCCTTTTGTCGTCGTCACAATGGGCCTTCAGAGTTTGAAGACCCGTGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATGAGTTGACCCTTTCAATTTCAGATGTGAAGACTCCAATCATTTTATCAGTGTATGACAAAGACACACTAACAGACCATGACAAAATGGGAGATGCCGAGATTGACATCGAACCATACATAGAGTGTTTGACGATGGGACTGGAAAAACTCCCAGATGGTTGTGTGGTTAAGAGAGTATATCCAAGCAGAACAAACTGTTTAGCTGATGAGAGCCAGTGTGTTTGGAACAAGGGGAAAATTGTACAGAACATGCACCTTAGGTTGAAGAATGTAGAGTGTGGTGAGGTGGCGATTCAGCTCGAATGGATCGATGTTCCTGGTTCTAAGGGTCTGCCGAGGGAGGGTACGAGCATCTTCTGA | 522 | 45.59 | MEHLLGLLRIRVQRGVNLAVRDTRSSDPFVVVTMGLQSLKTRVVKNNCNPEWNDELTLSISDVKTPIILSVYDKDTLTDHDKMGDAEIDIEPYIECLTMGLEKLPDGCVVKRVYPSRTNCLADESQCVWNKGKIVQNMHLRLKNVECGEVAIQLEWIDVPGSKGLPREGTSIF | 173 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 34247575 | 34249449 | - | Lag0029013.1 | Lac8g1626 | 617460 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac8g1626 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 163 | IPR044562 | - | |
| Lac8g1626 | 173 | CDD | C2_ArfGAP | 5 | 148 | - | - | |
| Lac8g1626 | 173 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
| Lac8g1626 | 173 | Gene3D | C2 domain | 5 | 168 | IPR035892 | - | |
| Lac8g1626 | 173 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Lac8g1626 | 173 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 158 | IPR035892 | - | |
| Lac8g1626 | 173 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac13g1421 | Lac-Chr13:13855316 | Lac8g1626 | Lac-Chr8:34247575 | 5.90E-58 | dispersed | |
| Lac1g3587 | Lac-Chr1:55122436 | Lac8g1626 | Lac-Chr8:34247575 | 1.10E-27 | dispersed | |
| Lac3g0420 | Lac-Chr3:3189914 | Lac8g1626 | Lac-Chr8:34247575 | 4.90E-51 | dispersed | |
| Lac8g1626 | Lac-Chr8:34247575 | Lac8g2067 | Lac-Chr8:39143231 | 1.10E-28 | dispersed | |
| Lac8g1626 | Lac-Chr8:34247575 | Lac10g0291 | Lac-Chr10:2220391 | 1.40E-58 | transposed |
Pathway information