Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g1749 ATGGTAACATCGGGGCCACCCACTCCTATGGGTGGTGGTGCACAGTCTGTTTCTCCCTCACTTCTGCGATCTAATTCAGGATTGTTGGGAGTTCAAGGTGGTCTGCTACCTTCTCAAGCAGCCTTTTCTTCACTTGTATCACCCCGCAATCAGTTCAATAATATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGAAATGGGGCTCCTAATTCTGGACTTCCATGTCCTGGCAGTAGCCACCCTGGTGGTATCGACCCTGGTGCGGAGCCAGACCCTCTTTCTGGTGTTGGCAATGGAATGAGCTTTAATAATCCTTCATCGTCATTTGTAGCATCAAATATGGCGAACCCCGTTTCATCCGTCCAAGGGCAGAACCCACAATTTTCTAACCATTCTAGCAGCCAGATGTTATCAGATCAGCAGCAGTCACAACAACAACTTGAACCCCAGAACTTTCAACATAGTCAACAGTCGATGGAACAGTTTTCTGCACTTCAGAGCAATCAACAACCACAATTTCAAGCAATTCGAGGGTTGACTGGTGTTGGACCTGTAAAGTTGGAGCCTCAAGTTACCGGCAATGATCAACATGGACAGCAGCAACAGCAGCAACAACAGCAGCAGCATTTGCAGACATTGAGAAATCTTGGTCCAGTGAAATTGGAATCACAACGACTTCAATCTCTGAGAGGTTTGGCACCAGTAAAAATGGAACCCCAACAATCAGACCAGTCATTATTTATGCAGCAGCAGCAGCAACATCAGCAGCATCAGCATCCGCATCAACAACAGCAACCTCAGCAGTTTCTCCATATGTCTAGACAGTCCTCTCAGGCAGCGGCTGCCCAAATTAATCTAATGCACCAACAAAGGTTTTTGCAGTTGCAACAACAACATCAGCAACAACATCTTTTAAAAAGTATGCCTCCTCAACGCCCACAATTGCAACAACATTTCCAACAGCAGAACCTTCCGCTCAGATCTCCCGTAAAACCAGGATATGAACCTGGAATGTGTGCTCGGCGTCTAACTTATTACATGTATCAGCAACAACACAGACCTGAAGACAACAACATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAAAAGTGGTGTGTTTCCATGTATGGAAGTGGGCGACAAACAACTGGAGTTTTTCCTCAGGATGTATGGCATTGTGAAATATGCAATCGCAAGCCTGGCCGTGGTTTTGAAGCAACTGCTGAAGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAAAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATACCATAATGCATCTGGTCAGATCGTCCTGGATTATGCAAAAGCAATACAGGAAAGTGTTTTCGAGCAACTTCGTGTTGTTCGCGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTCAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTGATTCCTAGGAGATTATTGATACCTCAGGTTAGTCAACTTGGGGTAGCAGCTCAAAAGTACCAGACTGCCATTCAAAATGCATCATCCAATTTATCAACTCCTGAATTGCAAAATAATTGTAACATGTTTGTGGCTTCAGCGCGACAATTAGCTAAAGCCTTGGAAGTTCCGCTGGTAAATGACTTGGGATATACAAAGAGATACGTACGCTGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGATTTGATTGATTACAGCAAAGAAACAGGGATTGGGCCAATGGATAGTCTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATCAGGGCTTACTAATCAAGCTCAAGTTTCTGATGAGCAGCAGCAGCAGCAGCAACAACAACAGCAATCATCCATGGCCCAGCACTCAAATAATAACCAGAGTTCTGTCCAGGCTTCTGCAGTGCAGCTTACGGCTAGCAATGGTGTGACCAGTGTAAATAACACCGTCAACCAACCTTCAACATCAAACTCAGCGAGCACCATTGTTGGGCTTCTTCACCAGAATTCTATGAACTCCAGACAGCAGCAGAACTCTATGGCAAATCCTAGCAACTCATATGGGGGAAGTTCTGTTCAGATCCCATCTCCTGGTTCTTCCAGTACAATTCCTCCTACACCACCGAACCCTTCTACATTCCAGCCACCAACTCCCACATCATCTAACAATCTTTCACAACCATCGCATACAGTTGTAAAAAATGCCAATCAGATGAGTGCTGCTAATTCTCCAGCAAATATCTCCATGCAACAACCTGCTTTATCCGGAGATGCTGATCCTAGTGATACACAGTCCTCCGTGCAAAAGATCTTACAAGAGATGATGATGAATAGTCAAATGAATGGCCCGACAAGTCTGGTTGGTGTTGGTTCGCTGGTCAACGATATGAAAAACGTGAATGGGGTCTTACCTACAAGCAATGCAGGTCTCAACAATGGGAACTGTATAGGTGGTAATGGAACAACCAACGGTGGCTCAGGCATGGGAGGAGGCGGATATGGATCAATGGGGAGTGGGCTTGGGCAGCCTGCCATGGTCAATGGAATGAGAACTGCAATGGGAAATAACTCCATAATGAACGGACGAATAGGAATGGCATCGCTCGCTCGAGAACAAAGCATGAATGGTCAACCGCAGGATTTGGGAAACCAGCTTCTAAGTGGACTAGGAGCTCATTCAACTTATGCAGAATTTGCCGATGGCCCTGCGAGAGATGGCAGGCACCGCATGGCAAAACAGGAATTTGGTCATTTGGAAGAAATCCAAAATGGGTTGCAGAGTGCTAACAGAAGGAAGTTTCGATTCAGGTGA 2871 45.11 MVTSGPPTPMGGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSLVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNSGLPCPGSSHPGGIDPGAEPDPLSGVGNGMSFNNPSSSFVASNMANPVSSVQGQNPQFSNHSSSQMLSDQQQSQQQLEPQNFQHSQQSMEQFSALQSNQQPQFQAIRGLTGVGPVKLEPQVTGNDQHGQQQQQQQQQQHLQTLRNLGPVKLESQRLQSLRGLAPVKMEPQQSDQSLFMQQQQQHQQHQHPHQQQQPQQFLHMSRQSSQAAAAQINLMHQQRFLQLQQQHQQQHLLKSMPPQRPQLQQHFQQQNLPLRSPVKPGYEPGMCARRLTYYMYQQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGVAAQKYQTAIQNASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGLTNQAQVSDEQQQQQQQQQQSSMAQHSNNNQSSVQASAVQLTASNGVTSVNNTVNQPSTSNSASTIVGLLHQNSMNSRQQQNSMANPSNSYGGSSVQIPSPGSSSTIPPTPPNPSTFQPPTPTSSNNLSQPSHTVVKNANQMSAANSPANISMQQPALSGDADPSDTQSSVQKILQEMMMNSQMNGPTSLVGVGSLVNDMKNVNGVLPTSNAGLNNGNCIGGNGTTNGGSGMGGGGYGSMGSGLGQPAMVNGMRTAMGNNSIMNGRIGMASLAREQSMNGQPQDLGNQLLSGLGAHSTYAEFADGPARDGRHRMAKQEFGHLEEIQNGLQSANRRKFRFR 956
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 35735992 35742594 + Lag0029136.1 Lac8g1749 617583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g1749 956 MobiDBLite consensus disorder prediction 692 719 - -
Lac8g1749 956 MobiDBLite consensus disorder prediction 246 288 - -
Lac8g1749 956 MobiDBLite consensus disorder prediction 600 652 - -
Lac8g1749 956 MobiDBLite consensus disorder prediction 192 218 - -
Lac8g1749 956 MobiDBLite consensus disorder prediction 692 748 - -
Lac8g1749 956 MobiDBLite consensus disorder prediction 200 218 - -
Lac8g1749 956 MobiDBLite consensus disorder prediction 105 178 - -
Lac8g1749 956 Pfam LIM-domain binding protein 350 604 IPR029005 -
Lac8g1749 956 MobiDBLite consensus disorder prediction 720 735 - -
Lac8g1749 956 MobiDBLite consensus disorder prediction 607 652 - -
Lac8g1749 956 MobiDBLite consensus disorder prediction 73 178 - -
Lac8g1749 956 PANTHER LIM DOMAIN-BINDING PROTEIN 1 888 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Lac8g1749 956 MobiDBLite consensus disorder prediction 244 288 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3692 Lac-Chr1:56001091 Lac8g1749 Lac-Chr8:35735992 9.00E-21 dispersed
Lac2g1638 Lac-Chr2:14671595 Lac8g1749 Lac-Chr8:35735992 6.80E-274 dispersed
Lac5g2905 Lac-Chr5:47221808 Lac8g1749 Lac-Chr8:35735992 2.00E-94 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g1749 - - - 0.0