Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac8g1821 | ATGTCCGCCCATAATCGCCGCCCGTCGTTCTCGTCGTCGACGTCGTCGTCGTTGGCTAAACGACAAGCGTCGTCGGCTTCCTCGTCCGACAATGTCGGGAAGGTTATGGCGGTTCCGCCACACTTGGCGAAGAAGCGAGCTCCACTTGGTAACCTGACGAATCTTAGGAATGTGTCTCATAGTGCGGCGAAAAGCTCTGTTCCGCCTGCTGTTATGGTACCTTGTGCAACCAAAGCTGTCAAGGCCAGAAAGAGTTCCCCTGCTAGAACTCGTAGCTCGAACTTGCCAGCGAACAATACAACCACATTGCTCGATGTCAAAACTACAAGTGCAGTTGCCCCTAGCAATGTTACAGCTTTCTCGAGAACTGATGCCACCGCCATTTCTAGTTGTATGGATGTCTCTCCGACTAAATCAGATGGAGTTTCAGTTTCTTTAGATGAAACTATGTCTACTTGTGATTCTTTCAAGAGTCCCGATGTCGAGTACATGGATAATAATGATGTTCCAGCAGTTGATTCCGTTGAGAGGAAAACTAAAAGCAGTCTCTGCATTTCAGGTCATGCACCAATTAATAGTCAGGCACCAATTAAAGGTAGTATATGCAATAGAGATGTACTTGCAGAAATGGAAACAGATGGTGATATCATTGATGTCGATACCGATTTCATGGATCCCCAACAATGTGCTACAATTGCTTGTGATATTTACAAGCACTTGCGAGCGTCTGAGGCAAAGAAAAGGCCTTCTACAGACTTCATGGAAAAAATTCAGAAGGATATAAATTCAAATATGCGTGCTATACTGATTGATTGGCTTGTGGAGGTAGCAGAAGAGTACAGGCTTGTGCCAGATACTCTTTATTTGACAGTGAACTACATTGATCGATACCTATCTGGAAATTCGATGGATCGACAACGGTTACAGTTGCTTGGTGTTGCTTGCATGATGATTGCTTCAAAATATGAAGAGATCTGTGCACCTCAAGTGGAAGAATTTTGTTATATAACTGATAACACATATTTCAAAGAAGAGGTATTGCAAATGGAATCTTCTGTCTTGAATTACTTGAAGTTCGAAATGACAGCTCCAACACCGAAATGTTTCTTAAGACGATTTGTTCGTGCTGCTCAAGGTGCCGATGAGCTTTCATCAATGCAGTTGGAGTGCTTGTCCAACTTCCTTGCTGAATTATCTCTTTTAGAATATGGCATGCTCTGCTACGCCCCGTCGCTCGTCGCTGCCTCGGCGATTTTCTTGGCGAAGTTCATTCTTCTCCCAACTAAGAGACCATGGAACTCCACCTTGCAGCATTATACACATTATCAACCGTCCGATCTCGTCGACTGCGTTAAAGATTTACATCGTCTCTGCTGTAACCATAATTCTAGCTTACCTGCTATCAGAGAGAAATACAGCCAGCATAAGTACAAACACGTGGCGAAGAAGTACTGCCCTCCGGCGATACCACCGGAGTTCTTCCAGAATCAAACACAGTAG | 1500 | 44.47 | MSAHNRRPSFSSSTSSSLAKRQASSASSSDNVGKVMAVPPHLAKKRAPLGNLTNLRNVSHSAAKSSVPPAVMVPCATKAVKARKSSPARTRSSNLPANNTTTLLDVKTTSAVAPSNVTAFSRTDATAISSCMDVSPTKSDGVSVSLDETMSTCDSFKSPDVEYMDNNDVPAVDSVERKTKSSLCISGHAPINSQAPIKGSICNRDVLAEMETDGDIIDVDTDFMDPQQCATIACDIYKHLRASEAKKRPSTDFMEKIQKDINSNMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNSMDRQRLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLKFEMTAPTPKCFLRRFVRAAQGADELSSMQLECLSNFLAELSLLEYGMLCYAPSLVAASAIFLAKFILLPTKRPWNSTLQHYTHYQPSDLVDCVKDLHRLCCNHNSSLPAIREKYSQHKYKHVAKKYCPPAIPPEFFQNQTQ | 499 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 36495788 | 36498796 | - | Lag0029208.1 | Lac8g1821 | 617655 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac8g1821 | 499 | Gene3D | - | 235 | 482 | - | - | |
Lac8g1821 | 499 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Lac8g1821 | 499 | CDD | CYCLIN_AtCycA_like_rpt1 | 225 | 360 | - | - | |
Lac8g1821 | 499 | CDD | CYCLIN_AtCycA-like_rpt2 | 364 | 477 | - | - | |
Lac8g1821 | 499 | ProSitePatterns | Cyclins signature. | 266 | 297 | IPR048258 | - | |
Lac8g1821 | 499 | FunFam | Mitotic cyclin 6 | 249 | 349 | - | - | |
Lac8g1821 | 499 | SUPERFAMILY | Cyclin-like | 225 | 361 | IPR036915 | - | |
Lac8g1821 | 499 | Pfam | Cyclin, C-terminal domain | 364 | 483 | IPR004367 | - | |
Lac8g1821 | 499 | PIRSF | Cyclin_A_B_D_E | 5 | 493 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Lac8g1821 | 499 | PANTHER | CYCLINS | 217 | 474 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Lac8g1821 | 499 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Lac8g1821 | 499 | FunFam | Cyclin A1 | 351 | 482 | - | - | |
Lac8g1821 | 499 | SUPERFAMILY | Cyclin-like | 364 | 487 | IPR036915 | - | |
Lac8g1821 | 499 | Pfam | Cyclin, N-terminal domain | 235 | 362 | IPR006671 | - | |
Lac8g1821 | 499 | SMART | cyclin_7 | 368 | 456 | IPR013763 | - | |
Lac8g1821 | 499 | SMART | cyclin_7 | 271 | 355 | IPR013763 | - | |
Lac8g1821 | 499 | SMART | Cyclin_C_2 | 364 | 486 | IPR004367 | - | |
Lac8g1821 | 499 | Gene3D | - | 249 | 362 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac12g0195 | Lac-Chr12:2145644 | Lac8g1821 | Lac-Chr8:36495788 | 2.10E-66 | dispersed | |
Lac13g1302 | Lac-Chr13:11999476 | Lac8g1821 | Lac-Chr8:36495788 | 5.20E-13 | dispersed | |
Lac2g0633 | Lac-Chr2:4734814 | Lac8g1821 | Lac-Chr8:36495788 | 6.70E-80 | dispersed | |
Lac6g0270 | Lac-Chr6:2177378 | Lac8g1821 | Lac-Chr8:36495788 | 9.80E-78 | dispersed | |
Lac6g1238 | Lac-Chr6:12008772 | Lac8g1821 | Lac-Chr8:36495788 | 2.70E-69 | dispersed | |
Lac8g1040 | Lac-Chr8:21490163 | Lac8g1821 | Lac-Chr8:36495788 | 4.00E-07 | dispersed | |
Lac8g1821 | Lac-Chr8:36495788 | Lac9g2754 | Lac-Chr9:45728656 | 7.80E-46 | dispersed | |
Lac8g1821 | Lac-Chr8:36495788 | Lac2g0367 | Lac-Chr2:2751758 | 2.10E-83 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac8g1821 | K06627 | - | csv:101221569 | 918.302 |