Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g1859 ATGGAAATTTGTGAAAAATTTTGGAGAATGGTGAAAAAAATGAAGGCTTATTTTGGTGTGGTGTTTCTGCAAATTTCATTTGCTGTTATGTACACAATTGTGGCTATTTCTCTTAAACATGGCCTTAGCCATTTTGTGTTTGCAGTCTATCGTCATGTTGTTGCCACAGTTCTTATCGCACCTTTTGCTCTCGTTCTTGAGAGGAAAACGAGGCCTCAGATGACGTTGCCCATCTTCTTGAGAATTTTGTTGCTTGGTTTTATAGAGCCAGTTCTGGACCAGAATTTATACTATTTGGGAATGAAGTACACTTCGGCGACATTCGCCTCCGCCGCCGTCAATATCCTTCCGGCCATCACCTTCATCCTGGCCGTCATTTTCAGGCTGGAGAGCGTCAACCTGAAGAAAAAACATAGCTTAGCCAAGGTTGTCGGAACTGTAATAACGGTCACCGGAGCAATGGTTATGAGTCTTTACAAAGGTCCGGCTTTCAATTTCCTTCCGAGCATCGGCCGAACCGAAATGAGCCACAACGGAACGGCGACGACGGAGTCGACAGATCAACATTGGGTCACCGGCACCATCTTCGTCCTCATCAGTTGTTGCGGCTGGTCCTCCTTTTATATTTTGCAGTCTGTGACATTAAAAATGTACCCGGCGGAGCTTTCACTGGCAGCTTTAATATGCTTCATCGGAATGGTGGGAGGCGCAGCCGTAACTCTCGCCGCCGAACGGAACATGATGGTCTGGGTTATTGGCTGGGATTCCAGACTTCTCGCCGTCGTTTACTCTGGAATGGTATGCTCTGGATTTGCATATTACGTTCAAGGAGTGGTGATGAAGGAACGAGGCCCAGTCTTTGTGACGTCATTTAGTCCTCTCTGTACGGTCATCACCGCCGCTCTCAGCTCCATTTTCTTGGCCGAGAAAATTCATCTTGGAAGTTTGATCGGGGCAACAATCGTGGTGTTAGGATTGTATACAGTAATTTGGGGAAAAAGTAGAGATTTTGAAAGTTTAAAACAATCTGATGATAGGAAGGAATTGCCGATCACAAATTCTACTTTTCGATCTACGACACCTGATGACTCGAATACCCGTGAAGTTGCCGGGAAGACGCCGGAAGCTCCAGCCAAACATCCGACTATGTAA 1152 46.09 MEICEKFWRMVKKMKAYFGVVFLQISFAVMYTIVAISLKHGLSHFVFAVYRHVVATVLIAPFALVLERKTRPQMTLPIFLRILLLGFIEPVLDQNLYYLGMKYTSATFASAAVNILPAITFILAVIFRLESVNLKKKHSLAKVVGTVITVTGAMVMSLYKGPAFNFLPSIGRTEMSHNGTATTESTDQHWVTGTIFVLISCCGWSSFYILQSVTLKMYPAELSLAALICFIGMVGGAAVTLAAERNMMVWVIGWDSRLLAVVYSGMVCSGFAYYVQGVVMKERGPVFVTSFSPLCTVITAALSSIFLAEKIHLGSLIGATIVVLGLYTVIWGKSRDFESLKQSDDRKELPITNSTFRSTTPDDSNTREVAGKTPEAPAKHPTM 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 36862403 36867145 - Lag0029246.1 Lac8g1859 617693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g1859 383 MobiDBLite consensus disorder prediction 342 383 - -
Lac8g1859 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 335 - -
Lac8g1859 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Lac8g1859 383 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020(InterPro)
Lac8g1859 383 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020(InterPro)
Lac8g1859 383 MobiDBLite consensus disorder prediction 352 367 - -
Lac8g1859 383 PANTHER WAT1-RELATED PROTEIN 20 344 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g3095 Lac-Chr5:48609967 Lac8g1859 Lac-Chr8:36862403 9.20E-37 dispersed
Lac8g1859 Lac-Chr8:36862403 Lac8g2482 Lac-Chr8:42723977 6.30E-72 dispersed
Lac8g1859 Lac-Chr8:36862403 Lac8g1860 Lac-Chr8:36871754 2.20E-96 tandem
Lac2g0909 Lac-Chr2:7137708 Lac8g1859 Lac-Chr8:36862403 3.00E-114 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g1859 - - - 0.0