Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g1860 ATGATGAATTCTATTATTTTGAGTAAGTTGAAACCTTATGTTCTTGTGGTGAGTCTACAATTTGGAATGGCAGGCATATATTTAATATGCATGGTCACTCTAACCCAAGGCATGAGTCGCTACATTTTAATCGTGTATCGAAACATCGTCGCTGCTCTCTTTCTCGCTCCTTTCGCTCTTATCTTCGAAAGGAAAACAAGGCCAAAGATGACCCTTTCGGTCGCTATGCAAATCATGGTCTTGGGCTTTCTAGAACCGGTTGTCGATCAGGGGTTCGGTTATTTGGGGATGACATACACTTCGGCATCATTTACTTCGGCCATCATGAACGCTGTGCCCTCTGTTACCTTTATCATTGCAGTAATTTTTCGAATGGAACGTGTAAATCTAAAACAAATACGAGGTTTAGCGAAGGTCGTCGGAACTTTAGTGACCTTCGCCGGAGCTTTGGTCATGACACTTTACAAAGGCCCAATTCTCGATTTCTTTTGGACAAGAAAAGCCAACCACCACTTTAACAACGGCGGCGCCGCCGCCAATCAGCACTGGGTGGCCGGAACTTTGTTCATCCTTCTCGGTTGTGTGGCTTGGTCTTGTTTCTATGTATTACAATCTGTAACAGTGAAGAGATATCCAGCAGATCTGACTCTTTCGTCATTGATATGCTTGGCTGGAGCACTTCAAAGCACAGTGATAGCAGTTGCCATAGAGCATCGTGCTAGCGCCTGGGCCGTGGGCTGGGACTCCAGGCTTCTCGCTCCTCTCTATACGGGAATAGTTGGGTCAGGAATTACATATTACTTCCAAGCTCTTGTTATGAAGACGAGAGGCCCTGTATTTGTGACGGCTTTCAACCCTTTATGTATGATTGTTGTCTCAATTTTGTCCTCCATTATTCTCGCCGAGAACATCCATCTTGGAAGCGTTATTGGAGCCATCATCATCGCAATTGGCCTTTATTCAGTTGTTTGGGGTAAGAGCAAGGATTATTCCACCGCCGCCGGCCACCCTGAAAAGCCTAACGCCGCCGTGCCGGAGCTCCCAATTACTGCCTCTAAACTCGCCGCCGAACAAGATGCTCATGATCTTCAACCTTCAAAATGA 1104 46.11 MMNSIILSKLKPYVLVVSLQFGMAGIYLICMVTLTQGMSRYILIVYRNIVAALFLAPFALIFERKTRPKMTLSVAMQIMVLGFLEPVVDQGFGYLGMTYTSASFTSAIMNAVPSVTFIIAVIFRMERVNLKQIRGLAKVVGTLVTFAGALVMTLYKGPILDFFWTRKANHHFNNGGAAANQHWVAGTLFILLGCVAWSCFYVLQSVTVKRYPADLTLSSLICLAGALQSTVIAVAIEHRASAWAVGWDSRLLAPLYTGIVGSGITYYFQALVMKTRGPVFVTAFNPLCMIVVSILSSIILAENIHLGSVIGAIIIAIGLYSVVWGKSKDYSTAAGHPEKPNAAVPELPITASKLAAEQDAHDLQPSK 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 36871754 36878586 - Lag0029247.1 Lac8g1860 617694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g1860 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 327 - -
Lac8g1860 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 153 - -
Lac8g1860 367 PANTHER WAT1-RELATED PROTEIN 14 336 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac8g1860 367 Pfam EamA-like transporter family 186 323 IPR000620 GO:0016020(InterPro)
Lac8g1860 367 Pfam EamA-like transporter family 23 141 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0909 Lac-Chr2:7137708 Lac8g1860 Lac-Chr8:36871754 1.70E-106 dispersed
Lac8g1096 Lac-Chr8:23264531 Lac8g1860 Lac-Chr8:36871754 2.40E-47 dispersed
Lac8g1860 Lac-Chr8:36871754 Lac8g2482 Lac-Chr8:42723977 9.00E-84 dispersed
Lac8g1859 Lac-Chr8:36862403 Lac8g1860 Lac-Chr8:36871754 2.20E-96 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g1860 - - - 0.0