Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g1869 ATGGCCAGCGACCAGCTCGAAGTTCTCAATGTCCTCGACCGTGCTAAAACCCAATTCTACCACTTCACGGCGGTCGTTATCGCCGGAATGGGCTTCTTCACCGATTCCTACGACCTCTTCTGCATCTCTCTCGTCACCAAACTCCTCGGCCGCATCTACTACACCGTTCCCGGCTCTCCCCGCCCCGGAACCCTCCCTCCCGCCGTCGCCGCCGCCGTCAACGGCGTCGCCCTCGCCGGCACCCTCGCCGGCCAACTCTTCTTCGGCTGGCTCGGCGACAAGCTCGGCCGGAAACGCGTCTACGGCCTCACCCTCATCCTCATGGTCGTCTGTTCCATCGCCTCCGGCCTCTCCTTCAACAGCTCTCCCACCGCCGTCATCACCACCCTCTGTTTCTTCCGCTTCTGGCTCGGCTTCGGCATCGGCGGCGACTACCCCTTATCCGCCACCATCATGGCCGAATACTCCAACAAGAAAACCCGCGGCGCCTTCATCGCCGCCGTCTTCGCAATGCAGGGCTTCGGCATTCTCGCCGGCGGCGCGGTGGCGATCGTGATCTCCTCGGTCTTCAGAACGCTCTTCCACGCGCCGCCGTACTCCGTCGATCCGGTGAGATCGACAGTCCCGGAGGCGGATTACGTCTGGAGAATTATACTGATGTTGGGATCGTTGCCGGCGCTCTTGACTTACTACTGGCGGATGAAGATGCCGGAAACGCCGCGCTACACGGCGTTGGTGGCGAACGACGAGAAGAAAGCCCGCGCCGACATGTCGAAAGTGCTGAACGTTGAAATCGGTCAAAACGCAGAGACTCATACCAAAATCAAAACAAATTCATTTGGGTTTTTCAGCAGAGCGTTCGTTCGTCGACATGGGCTTCATCTTCTAGGCACGGCGAGCACTTGGTTTCTGATCGACGTGGCGTATTACAGCCAGAATCTGTTCCAGAAGGACATTTTCAGCGCCGTGGGCTGGCTGCCGGCGGCGAGGACCATGAGTGCTTTGGATGAGGTTTTCAAAATCGCCAAAGCTCAGACTCTGATCGCTCTGTGTGGGACGGTTCCCGGGTACTGGGCGACGGTGCTCCTCATCGACCGGGTCGGTCGGTTTTTCATTCAGGTGGTTGGGTTTTTTTTCATGACGGTTTTCATGTTTGCGCTTGCTATTCCTTACCATCATTGGACTGAGAACCATGTGGGGTTCGTTGTGATGTATGGACTCACATTTTTCTTTGCTAATTTTGGTCCTAATTGTACTACGTTTGTTGTCCCGGCCGAGATTTTCCCGGCGAGGTTTCGGTCGACTTGCCACGGGATTTCGGCCGCCGCCGGGAAGGCCGGAGCCATCGTCGGAGCTTTTGGGTTCTTGTATGCAGCTCAGAGCCAGGATGGGAGTAAGACGGATGCAGGCTATCCACCAGGGATTGGAATGAGGAATTCTTTGATAATTTTGGGAGTTGTTAATGTTGTTGGGTTGCTTTTTACTTTCTTGGTTCCAGAATCCAAAGGGAAGTCTTTGGAAGAAATGTCTAAAGAGAATGAAGTTGAAGAAGAAGAAGAAAGAAGTGAAGAGCAAGATAATGGAGTTCATCACATTGTTTAG 1602 54.99 MASDQLEVLNVLDRAKTQFYHFTAVVIAGMGFFTDSYDLFCISLVTKLLGRIYYTVPGSPRPGTLPPAVAAAVNGVALAGTLAGQLFFGWLGDKLGRKRVYGLTLILMVVCSIASGLSFNSSPTAVITTLCFFRFWLGFGIGGDYPLSATIMAEYSNKKTRGAFIAAVFAMQGFGILAGGAVAIVISSVFRTLFHAPPYSVDPVRSTVPEADYVWRIILMLGSLPALLTYYWRMKMPETPRYTALVANDEKKARADMSKVLNVEIGQNAETHTKIKTNSFGFFSRAFVRRHGLHLLGTASTWFLIDVAYYSQNLFQKDIFSAVGWLPAARTMSALDEVFKIAKAQTLIALCGTVPGYWATVLLIDRVGRFFIQVVGFFFMTVFMFALAIPYHHWTENHVGFVVMYGLTFFFANFGPNCTTFVVPAEIFPARFRSTCHGISAAAGKAGAIVGAFGFLYAAQSQDGSKTDAGYPPGIGMRNSLIILGVVNVVGLLFTFLVPESKGKSLEEMSKENEVEEEEERSEEQDNGVHHIV 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 36966795 36968396 + Lag0029256.1 Lac8g1869 617703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g1869 533 NCBIfam phosphate:H+ symporter 11 512 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Lac8g1869 533 MobiDBLite consensus disorder prediction 505 533 - -
Lac8g1869 533 SUPERFAMILY MFS general substrate transporter 12 512 IPR036259 -
Lac8g1869 533 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 503 IPR020846 GO:0022857(InterPro)
Lac8g1869 533 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 13 508 - -
Lac8g1869 533 Pfam Sugar (and other) transporter 26 511 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lac8g1869 533 CDD MFS_PhT 25 502 - -
Lac8g1869 533 FunFam Inorganic phosphate transporter 1-6 20 525 - -
Lac8g1869 533 Gene3D MFS general substrate transporter like domains 20 527 IPR036259 -
Lac8g1869 533 Coils Coil 506 526 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g0590 Lac-Chr7:4710468 Lac8g1869 Lac-Chr8:36966795 2.30E-218 dispersed
Lac7g0591 Lac-Chr7:4729829 Lac8g1869 Lac-Chr8:36966795 6.40E-224 dispersed
Lac8g1869 Lac-Chr8:36966795 Lac1g2897 Lac-Chr1:49877571 2.60E-07 dispersed
Lac8g1869 Lac-Chr8:36966795 Lac11g2617 Lac-Chr11:42174581 1.10E-234 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g1869 K08176 - csv:101205342 893.649