Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g1986 ATGTCTAAAGAGGAGGTAATAATTTTGGACTGTTCACTCAGCCCATTTTGCAATAGGGTTAAGATTGCTTTGAATGAGAAGGGAGTGAGTTATGAGAGTAGAGAAGAGGACTTGTTTGGTTGGAAAGGTGGGAAAAGTGAGTTGTTGCTCAAATCTAACCCTATTTACAAGAAAGTGCCTGTTCTCTTGCATAATGGTAAGCCATTGAATGAAAGCTCCATCATTGTCAACTATATTGAGGAGACTTGGCCTTCTTCTTCCCCTCTTCTTCCTTCTTCGCCCTATAAAAGAGCTCAAGCTCGGTTCTGGATTGACTATATCGATAAAAAGGTATTTGAGGTGGGTGGCAAGATTTGGAGGAGCAATGGGGAAGAACAAGAGGCAGCCAAGAAGGAGTTGATAGAGATTTTGAAGCAATTGGAGGAAGCTTTAGGGGAGAAAGATTTCTTTGGAGGTGAAAGCTTTGGGATTGTGGATGTGATTGCAATTCCACTCACAAGTTGGTTCTATGCTTATGAGAAAGTTGGGAACTTCAAAGTGGAAGAACATTGCCCAAAATTCTCAGCTTGGGAAAAGAGGTGTTTGCTAAAGGACACAGTTGCCAGTGTCATCCCAAGCCCTGAGAAGGTCTATGGATTTGTCATCTCCATGAGAAAGAAACTAGGGCTTGAATAG 675 42.07 MSKEEVIILDCSLSPFCNRVKIALNEKGVSYESREEDLFGWKGGKSELLLKSNPIYKKVPVLLHNGKPLNESSIIVNYIEETWPSSSPLLPSSPYKRAQARFWIDYIDKKVFEVGGKIWRSNGEEQEAAKKELIEILKQLEEALGEKDFFGGESFGIVDVIAIPLTSWFYAYEKVGNFKVEEHCPKFSAWEKRCLLKDTVASVIPSPEKVYGFVISMRKKLGLE 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 38265850 38266701 + Lag0029373.1 Lac8g1986 617820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g1986 224 CDD GST_C_Tau 95 214 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Lac8g1986 224 CDD GST_N_Tau 6 83 - -
Lac8g1986 224 SUPERFAMILY GST C-terminal domain-like 81 221 IPR036282 -
Lac8g1986 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 213 IPR010987 -
Lac8g1986 224 Gene3D Glutaredoxin 2 92 - -
Lac8g1986 224 Pfam Glutathione S-transferase, N-terminal domain 12 84 IPR004045 -
Lac8g1986 224 ProSiteProfiles Glutaredoxin domain profile. 1 97 - -
Lac8g1986 224 FunFam Tau class glutathione S-transferase 1 92 - -
Lac8g1986 224 FunFam Glutathione S-transferase U20 93 224 - -
Lac8g1986 224 Coils Coil 123 146 - -
Lac8g1986 224 Gene3D - 93 224 - -
Lac8g1986 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 87 IPR004045 -
Lac8g1986 224 SUPERFAMILY Thioredoxin-like 7 111 IPR036249 -
Lac8g1986 224 SFLD Main.3: Omega- and Tau-like 2 222 IPR045073 -
Lac8g1986 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 214 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Lac8g1986 224 SFLD Glutathione Transferase (cytosolic) 2 222 IPR040079 -
Lac8g1986 224 Pfam Glutathione S-transferase, C-terminal domain 122 194 IPR004046 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2360 Lac-Chr5:42267690 Lac8g1986 Lac-Chr8:38265850 1.30E-66 dispersed
Lac5g2361 Lac-Chr5:42272851 Lac8g1986 Lac-Chr8:38265850 5.80E-70 dispersed
Lac7g2133 Lac-Chr7:35007901 Lac8g1986 Lac-Chr8:38265850 3.70E-27 dispersed
Lac8g1986 Lac-Chr8:38265850 Lac10g0068 Lac-Chr10:564245 9.50E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g1986 K00799 - csv:101213628 402.134