Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2062 ATGGCGCTCTCTGATCAACCCTCTCGCCAATCTCTCATCCCCAGCTTCCTCTACTCTTCCCCTTCTTCCACTCGCACTCTTCCCCTCAAGAAGATGCTTCAGTCCTCTTCACCCACTCTCGATGCTGTTTCCTCTTCTCCCAAGAGCTTCGTTGTTCCCGCCCCGAGTGAGCCCTCCAAGAAGATCGAGATGTACTCGCCGGCTTTCTACGCTGCTTATCTGTGGGTTTTCTCGCTTTGTTATGAGATTGACCCTGCGAAATACAAAAGCATTTCGTCTGGTTTTGGAGTTTTGCTTAAGGAGCAGGGTGTGAGGGGTTTCTTCAGGGGTTGGGTGCCTACCCTCCTCGGATACAGTGCCCAGGGTGCCTGCAAGTTTGGTTTCTACGAATTTTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCGGCTAAGTACAAGACCTTGATCTACCTTGCTGGCTCTGCATCTGCTGAGGTGATTGCTGATGTTGCGCTTTGCCCGTTTGAAGCAGTGAAGGTTCGAGTTCAAACTCAACCTGGTTTTGCTAGAGGACTAGCTGATGGACTTCCTAAGTTTGTCAAATCTGAAGGAACCCTAGGGCTGTACAAGGGTATTGTTCCACTCTGGGGAAGACAGATTCCATACACCATGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGATATACAAGTATGCCATTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTTTGCTGGTGGATACGTGGCTGGTGTTTTCTGTGCTATTGTGTCTCATCCTGCCGATAATCTTGTGTCCTTCCTCAACAATGCCAAAGGAGCAACTGTTGGTGATGCTGTTAAGAAGCTTGGATTATGGGGTCTCTTCACCCGTGGTCTACCCCTTCGTATCGTTATGATTGGAACTCTTACTGGTGCTCAGTGGGGTATTTACGATGCATTCAAAGTATTTGTTGGACTTCCTACTACTGGTGGTGTTGCTCCTGCTGCCCCTGCCCCTGCTGCTGAGCTCGCAAAGGCGTAA 1056 48.77 MALSDQPSRQSLIPSFLYSSPSSTRTLPLKKMLQSSSPTLDAVSSSPKSFVVPAPSEPSKKIEMYSPAFYAAYLWVFSLCYEIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKYAIPTPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAAPAPAAELAKA 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 39120965 39124362 + Lag0029449.1 Lac8g2062 617896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2062 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 148 232 IPR018108 -
Lac8g2062 351 Gene3D Mitochondrial carrier domain 29 330 IPR023395 -
Lac8g2062 351 FunFam Phosphate carrier protein, mitochondrial 71 329 - -
Lac8g2062 351 Pfam Mitochondrial carrier protein 149 235 IPR018108 -
Lac8g2062 351 Pfam Mitochondrial carrier protein 86 138 IPR018108 -
Lac8g2062 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 135 IPR018108 -
Lac8g2062 351 MobiDBLite consensus disorder prediction 1 23 - -
Lac8g2062 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 328 IPR018108 -
Lac8g2062 351 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 82 338 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Lac8g2062 351 SUPERFAMILY Mitochondrial carrier 84 324 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0462 Lac-Chr12:5088383 Lac8g2062 Lac-Chr8:39120965 3.30E-71 dispersed
Lac8g0058 Lac-Chr8:899108 Lac8g2062 Lac-Chr8:39120965 2.00E-123 dispersed
Lac8g2062 Lac-Chr8:39120965 Lac3g0033 Lac-Chr3:301474 1.10E-142 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2062 K15102 - csv:101221771 609.372