Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac8g2070 | ATGTTGAAATTGAAGTCCAAAATTGACTATTTTTTTGGCAAAAAAATTAATGTTGTTAAATTACAAATTTTAAGAAAAAAGGGTTCGAATTTAGTGCCCCAAAAACCCACCCAGGTCCAATTTCAACCCGAAATAGGAAAACAAGAAAAGGGCAGAGAAGGAGAAGAAGAAGAAGAGAGAACTGAAGAACTTCTCACCTTCGACTTCCAGTTCCAGAACGAAGCCCAGATTCCATTGCTGCAGCTCGCACCGGAGCTTCCTTCCAATATCTTCATCTCTGTAACCGGCGGCAACCCTCTTCTTCCCCATTTCATTCTTCCATATTCGCTGATTATGCCAGACGTGCAAGCCCTTGTGAATGATTTCGTTATCAAGCTCAAGAAACGTAAAATTGAGGGCTCCTTGGCCACCGCGAAGCATACGGCTGAATTGCTTCGTTCTGTCATTTCGCAGCAGCGAATACCCTACACAAATCAGGCGGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGTGTTTTGCACATTATTAGAGAGGAGGATCTTTCTCTCACCACAGCTTCTATAGCTGGGTTGAGCTTAGCAGCAGTTAGTGATGATGAAGATGACAGTGAAAAAGATGATCGCCCGGCCCTCTCAGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCGCCTTCCTTGCAGACTCTTCTTGAGGACGTTCCTAACCAAGCATCTGTTCATCAAACTTCATCATCTGGAGGTGATTCAGAAGGAAAAAGCAAATCTGCTGATAAAAGTTCGAGGAGTCGGAAACTCAAGCATGATGTAATTGAAGCTGTTAATGAACTTATTCAGGATATTGCAACTTGTCATGAACAGATTGCTGAGCAAGCAGTGGAACACATCCATCAAAAGTTTCCCAACTCAAGGCTTGGAAACTTGCTTTCCAATCACTTGTCGGCTGAACTGAATTCTAAGCTTGAACACTCCCTAACATGGCTTGGAGAATGGGAGTTCCAGCTCTTCAGTCTCTTCTCCTTTGCTAAAGAAATTCTGGTTCGAAAGATTTCAAAGCGAGGTAATATTAACTCTGGGGAGTTCCAGAACAGTATTGGAATTTCTTTGTGCTGCCAAGGAGAAGAAAGGTCCTTCCGTGTGTTTGTTGCTGAAGGTGCTCCAAGATACCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAAACCACACTTATTACTGATTCTGCAGTTTTTGCCATGATCTCCGGTGAGACGGACATGAAAACTGATGAGATAGCTTCATCTTCAAATCTGTTCTGCAAGGTAATAGTTGGTGCTCATGCTGTCATGGCAAATGGTGGTGTCATGGCACCTGTCGGATTGAATATGGTGGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTTGTACTAGCTGGAAGTCACAAGTTGTGCCCTTTGTATCCTCACAATCCTGAAGTTCTACTCAATGAACTGAGATCCCCGTCAGAGCTACTGGACTTCGGTGAATTTTCAGATTGCATGGACTTTGGAACTAACACTGGTTCTCCTCTTCTCCATGTAGTCAACCCTACGTTTGACTATGTGCCACCATCACTTGTTAGTTTATTTATTACTGATACAGGTGGCCATAACTCATCATACATGTATCGGCTTATTGCTGATTATTATTCAGCTGATGATTTGGATAAATTTCTGCCTACCTGGGCTCCAGTTCGTTGCAAACTGCATCTTGAAATGTTACAATGCCTTTCCAGTTCGCATGTTGGATATTATGCACTTTTCATTGCTTCTGTTGCGTTACTTTTCATTAAGATCAATGACCTTTCAGCGATCAACCGTTTCAGGATTGCAGTTAGCAACACAAGCGAGCTGATGAGAAGAATCATAAATTCTAGCCTCAACCATGTAGAACCATCGTCCTAG | 1998 | 43.49 | MLKLKSKIDYFFGKKINVVKLQILRKKGSNLVPQKPTQVQFQPEIGKQEKGREGEEEEERTEELLTFDFQFQNEAQIPLLQLAPELPSNIFISVTGGNPLLPHFILPYSLIMPDVQALVNDFVIKLKKRKIEGSLATAKHTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLSLAAVSDDEDDSEKDDRPALSAAAVAAAARSTLRPPSLQTLLEDVPNQASVHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQKFPNSRLGNLLSNHLSAELNSKLEHSLTWLGEWEFQLFSLFSFAKEILVRKISKRGNINSGEFQNSIGISLCCQGEERSFRVFVAEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISGETDMKTDEIASSSNLFCKVIVGAHAVMANGGVMAPVGLNMVALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNTGSPLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMYRLIADYYSADDLDKFLPTWAPVRCKLHLEMLQCLSSSHVGYYALFIASVALLFIKINDLSAINRFRIAVSNTSELMRRIINSSLNHVEPSS | 665 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 39182577 | 39190821 | - | Lag0029457.1 | Lac8g2070 | 617904 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac8g2070 | 665 | FunFam | translation initiation factor eIF-2B subunit beta | 384 | 581 | - | - | |
Lac8g2070 | 665 | Pfam | Initiation factor 2 subunit family | 130 | 320 | IPR000649 | GO:0044237(InterPro) | |
Lac8g2070 | 665 | Pfam | Initiation factor 2 subunit family | 395 | 568 | IPR000649 | GO:0044237(InterPro) | |
Lac8g2070 | 665 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA | 395 | 586 | IPR051855 | GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER) | |
Lac8g2070 | 665 | MobiDBLite | consensus disorder prediction | 37 | 58 | - | - | |
Lac8g2070 | 665 | Gene3D | - | 304 | 580 | IPR042529 | - | |
Lac8g2070 | 665 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 100 | 321 | IPR037171 | - | |
Lac8g2070 | 665 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 395 | 585 | IPR037171 | - | |
Lac8g2070 | 665 | MobiDBLite | consensus disorder prediction | 254 | 272 | - | - | |
Lac8g2070 | 665 | MobiDBLite | consensus disorder prediction | 254 | 287 | - | - | |
Lac8g2070 | 665 | MobiDBLite | consensus disorder prediction | 273 | 287 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac8g2070 | Lac-Chr8:39182577 | Lac9g1280 | Lac-Chr9:29548772 | 7.40E-44 | dispersed | |
Lac8g2070 | Lac-Chr8:39182577 | Lac7g2184 | Lac-Chr7:35915515 | 1.40E-53 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac8g2070 | K03754 | - | cit:102624845 | 585.489 |