Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2164 ATGAATGGGGAAGTAGCTGCCACCGGATCGCCGGCCGCTCCGGCGGGCTCCGCCGAGCCCCAGTATGTGAGGGCCAAGACTTCTGTATGGTGGGACATCGAGAACTGTCAGGTCCCCAAGGGCTGCGATCCTCACGCCATCGCCCAAAACATCAGCTCCGCTCTCGTCAAAATCAACTACTGCGGCCCTGTTTCCATTTCCGCTTATGGAGACACCAATCGCATTCCCAATTCTATTCAGCAAGCTCTCTCCAGTACTGGCATCGCCTTGAATCACGTCCCTGCCGGTGTTAAAGATGCAAGTGACAAGAAGATTCTAGTTGATATGCTGTTTTGGGCGGTTGATAACCCTGCTCCTGCAAATTATTTGCTAATTTCCGGTGATAGGGATTTTTCTAACGCACTGCATCAATTAAGAATGAGAAGATATAATATTCTTCTTGCACAGCCACAAAAGGCTTCTGCACCACTAGTCGCAGCAGCAAAGAGTGTTTGGCTTTGGATGAGTCTTGTAGCTGGAGGACCCCCAATGTCCAATGCTGAATCATCTCAACTTGTGAATGGCGTCCTTACTTCTGACCCTCAAATATCACATAACTCTGGATTTGATCATAATCAGACAACACAGGCTATAGCTTACAAACCTGAAAATGTCTCTTTGGGAAACCAAAGACCTTATTCTACTGAGAGGATGGGTGACAACAAACATAAAGGTAAATATATACAGAAAAACTCCAACCAACCAGTCCTATCCAGAGCTTTAAGCTCACCTGTCTCTTTGCAAGAGAAAAACCTTAATTTTTTAAACCAACCGAATCATATGCAAGCAAAGCAGTTTAAGAAAGCACCCCATGAATTCTTTGGTAATGGCAATTCTGTAGCCTCTTCTAGTCAGTCTACTCTAAACCCGCTTATTGAGAATTCCAGTCATGCTAGGACTGACGGTAATGTTTCAATGGGTAGTTCCTCAACTTACCAACCTCCGCACATGAGGCAAAACAACATGCAGTTCCATCCTTCTTTTCGACCAGATAATGTTTTTCCTCCTAACTCCAATAATCATAATTCTTTCCCAGTCCCTGGTCAACCTGATCTCTCTGCACCCAATATTAGTCAGCTACATATCGCTGATTATCCCAATTATGCTATAAATCCTCAAAATTTTCATCATCAAGCTGGTGAATTTAGACCGCATACCAAATCTCAACATCCTGCCAACTTTAATTTGCCAGACAAAGGCCGTAGTCAGCATGGTGGCCAGCCATTCCATCATGAAGCGTTGAATAAAAGACATGCTCGTGATGTAGTAGAGCATACGCCTCATTCATCTTCCACTACTGTTACTAGAAGTTTTTCTTCTAATGATGTCTGGGGATCTCAGGGGCAACCACCACCTTCGGAGTACACTCAAGGCCTTATTGGAGTTATTCTTCTTACATTAAACACCCTGAAAACAGAAAAAATTATGCCAACTGAGGCAAATATAGCTGACTGCGTCCGATATGGAGATTTGAGAAACTGCAATACTGATGTAAAAATGGCACTGGATAGTGCGGTAGAGCATAATATGGTAGTGAAGCAGAATTTAGGAGCAGTGCAATTGTATGTTGGTAAAACAGAAAAATTGTGGAAGTGTGTGAACCCTCTAGGTGGGCATCCCAATCAGTACCAAAAAGCTATATGGGATAAGATTCAAAATTTTTTGGCTTCTTCAGCTGGTCGTTCTGCAATAATGGCTTCTCGTTGCAGATATGAAGCAGCATTAGTACTGAAGAAAGAATGCTTAAAAGATTTTGCCTTGGGCGATGTGCTTCAGATTTTGAATATGATAACCTCAATGAAGAAATGGATTACTCATCATGTTTCAGGATGGCAGCCAATTAATGTTATGGGCTTTGTTTGTCATCATGCCATATTTACTGCAGAAGGAACTAGGGAATGCTACCAATGGATCAGGAGGCATGGAGAGGACTTGGAGCTTTTATTGTGGGAGTCTGGGAGCTTTTATTGTGGGGGTGTGAGTTTGCTAACTTCCTTTGGAGTTGTTGGAGATCTTTGTTTGGGGGTTAAGCATGGTGCATCATAG 2085 43.26 MNGEVAATGSPAAPAGSAEPQYVRAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKINYCGPVSISAYGDTNRIPNSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWMSLVAGGPPMSNAESSQLVNGVLTSDPQISHNSGFDHNQTTQAIAYKPENVSLGNQRPYSTERMGDNKHKGKYIQKNSNQPVLSRALSSPVSLQEKNLNFLNQPNHMQAKQFKKAPHEFFGNGNSVASSSQSTLNPLIENSSHARTDGNVSMGSSSTYQPPHMRQNNMQFHPSFRPDNVFPPNSNNHNSFPVPGQPDLSAPNISQLHIADYPNYAINPQNFHHQAGEFRPHTKSQHPANFNLPDKGRSQHGGQPFHHEALNKRHARDVVEHTPHSSSTTVTRSFSSNDVWGSQGQPPPSEYTQGLIGVILLTLNTLKTEKIMPTEANIADCVRYGDLRNCNTDVKMALDSAVEHNMVVKQNLGAVQLYVGKTEKLWKCVNPLGGHPNQYQKAIWDKIQNFLASSAGRSAIMASRCRYEAALVLKKECLKDFALGDVLQILNMITSMKKWITHHVSGWQPINVMGFVCHHAIFTAEGTRECYQWIRRHGEDLELLLWESGSFYCGGVSLLTSFGVVGDLCLGVKHGAS 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 39972796 39977854 - Lag0029551.1 Lac8g2164 617998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2164 694 PANTHER LIMKAIN B LKAP 17 560 IPR024768 GO:0005777(InterPro)|GO:0010468(InterPro)
Lac8g2164 694 Gene3D - 21 169 - -
Lac8g2164 694 Pfam NYN domain 26 162 IPR021139 GO:0004540(InterPro)
Lac8g2164 694 CDD PIN_limkain_b1_N_like 26 150 - -
Lac8g2164 694 MobiDBLite consensus disorder prediction 439 464 - -
Lac8g2164 694 Pfam OST-HTH Associated domain 580 629 IPR025677 -
Lac8g2164 694 MobiDBLite consensus disorder prediction 435 464 - -
Lac8g2164 694 MobiDBLite consensus disorder prediction 396 422 - -
Lac8g2164 694 MobiDBLite consensus disorder prediction 219 240 - -
Lac8g2164 694 MobiDBLite consensus disorder prediction 307 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac8g2164 Lac-Chr8:39972796 Lac9g0318 Lac-Chr9:5117814 6.40E-38 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2164 - - - 0.0