Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2191 ATGGCGGGAGTACAATTGCTGGAAATGTTTCCATACCGAGAGCTGGAAGAGGGAGCCACTGGTTCGTCTGATTGGAATCCAACTGATGCTGTGCTTTTTGTTGGACTGAGTTTGGTGCTTGGAATTGCTTGCAGACACCTATTGCGAGGCACCAGAGTTCCTTATACAGTTGCCTTGCTCGTTCTTGGCATAGTTCTTGGATCCATTGAATATGGCACACATCATCGATTGGGAAAGATAGGAGATGGTATTCGTCTCTGGGCAAAAATTGATCCTGATCTATTATTGGCCGTTTTCCTTCCTGCTCTGCTGTTCGAGAGTTCCTTTTCAATGGAAGTGCACCAAATAAAGAGGTGTCTGGCCCAAATGATCTTATTAGCTGGTCCAGGTGTTTTAATTTCAACCTTCTTGCTTGGATCTGCTTTCAAGCTCACTTTCCCATATAATTGGGACTGGAAAACATCATTGTTGCTTGGGGGACTTCTGAGTGCCACGGATCCTGTGGCTGTTGTAGCTCTATTGAAAGAGCTAGGAGCAAGTAAAAAACTGAACACGATAATCGAAGGAGAATCCTTGATGAATGATGGAACAGCAATTGTGGTTTATCAACTTTTTTATCAAATGGTCCTTGGAAAGAGCTTTAACTGGGGAGCCATAATCAAATATCTCACACAAGTTTCTCTGGGGGCTTTGGGAATTGGTCTTGCTTTTGGGATTGCATCTGTTTTATGGCTCGGGTTCATTTTCAACGACACAGTGATAGAGATTGCATTAACACTTGCTGTGAGCTATATTGCTTACTTCACTGCTCAAGAGGGAGCTGATGTTTCAGGTGTTTTGGCGGTGATGACATTAGGAATGTTTTATGCTGCAGTTGCAAGAACAGCTTTTAAGGGCGATGGTCAACAAAGCTTACATCATTTTTGGGAAATGGTTGCTTACATAGCGAATACATTAATTTTCATATTGAGTGGAGTTGTTATAGCTGAAGGAGTTCTTGGAAGCAAAGGAATTCTTGATGATGGAGCTTCATGGGGCTTCCTCATTCTTCTTTATGCATATGTGCAAGCTTCTCGAGTTATGGTTGTTGGAGTACTGTATCCATTTCTGCGGTATTTTGGATATGGTTTGGATTGGAAAGAAGCTACAATACTGACATGGTCAGGTCTGCGTGGAGCTGTTGCCCTGTCACTTTCACTGTCAGTTAAGCGATCAAGTGACCACTCATTATACATCAGTTCAGAAACTGGAACTCTGTTTGTTTTTTTCACGGGTGGAATCGTATTCTTGACACTTATTGTAAATGGTTCAACCACACAATTCATTTTACATCTTCTGCATATGGACAAGCTCTCCGTGGCTAAGAAACGCATATTGGATTATACAAAATATGAGATGCTGAACAAAGCATTGGACGCCTTTGGAGATCTTGGAGATGATGAGGAATTGGGACCTGCCGACTGGCCTACGGTGAAAAGATATATCACAAGTCTCAGCGATGTGGAGGGGGAACCACAGCACCCGCATAATGCATTTGAAAGTGATCAAAATGTTCACTCTATGAATTTGAGAGACATTCGTATACGACTTTTGAATGGTGTTCAAGCTGCTTACTGGGGGATGCTTGATGAGGGAAGGATAACACAAGCTACTGCAAATATCTTGATGCAATCTGTGGATGAAGCCCTTGATCTGGTTGCAAACGAGCCCTTATGTGATTGGAAAGGTTTAAAAGCTAACGTCCATTTTCCAAATTATTACAAGTTCCTTCAGACAAGCATTTTCCCTCAGAAGTTGGTTACATATTTCACTGTGGAAAGATTGGAATCAGGATGTTATATATGTGCTGCATTTCTCCGCGCACATAGAATTGCGAGAAGACAGCTTCATGAGTTTATAGGTGATAGTGATATTGCTTCTACTGTTATTAATGAAAGTGAGGCTGAAGGTGAAGAAGCACGAAAATTTCTAGAAGATGTTCGTGAGACATTTCCTCAGGTTCTGCGTGTTGTTAAAACCAGACAAGTAACATATTCAGTACTCAACCATTTAATTGAATATGTCCAAAATCTAGAGAAGGTTGGCCTATTAGAAGAGAAAGAGATGATGCATCTTCATGATGCTGTCCAGACTGATTTGAAAAGGCTTCTAAGAAATCCTCCTCTGGCAAAGGTTCCAAAAATGCGCAACTTAATTAGTGTCCATCCATTTCTTGGGGCACTTCCTCCTTTAGTGCGTGAACCACTTGAAGTTTCAACAAAAGAAGTGATGAAACTACGTGGTGTGACACTTTACAAGGAAGGTTCAAAGCCTAGTGGTGTCTGGTTGATATCTAACGGAGTGGTAAAGTGGGAAAGTAAGAGCATGAGAAACAAGTTCTCCTTGCACCCGACATTTACTCATGGAAGTACTTTAGGCCTATATGAATTGCTTACTGGGAAGCCATGCATCTGTGACATGATAACAGATTCTGTTGTTCTCGCTTTTTTTATTGAACATGACAAGTTTCTTTCGGTACTTAGATCAGATCCTTCGGTTGAAGATTTCTTGTGGCAGTTCCATTGTTCTTGCCAAACTTTGTTTCCACAAGTGTTCGAGAAAATGGAAATGAGAGATCTGAGAATTCTTGTTGTTGAAAGGTCAGTAATGACTACGTATATAGCAGGAGAAACAATAGAAATTCCACGCCATTCTATTGGCTTTTTGTTAGAAGGATTTATCAAAAGTCGTGGCATCCAAGAGGAACTGATAACATCACCTGCCGTGTTGTTCTCTTCGCATGGGAATCAGAGCTTCCATAATATGGAAAACTCAGGGATGAGTGGTTCTAGTTTTTCTCATCAAGGCTCCTGTTATGAAGTTGAAACAAGATCAAGAGTAATCATTTTTGACATGGCTGCCCTTCAATCAGATAACATTTTAAATCGGTCATCGTCATTTATACATCCTGTTGATCACCCTCAAAGATCTCTGAGCAGAGATCACTCTGCTCTTATGAGTTGGCCTGAACTGTTTTCCAAGCCAAGACCACCACAGAAGCAGAAATCTGATAGAACTGAGCGTCCAGCTGATAGCTTGTCTGCGAAGGCAATGCAGCTTAGCATATACGGTAGCATGGTTGATATTCGTCAGCGGACTAAGAGTTTTCCAGGCCATATTGCCGAACCATCTCTTAGCCGGTCAAATCCTACAATTCCTTCACACAAATATGTTCCCTTTCCATCTGTCAAATCAGAAGGAGCCGCTACAATGAAAAAGAGGCTTGATGCAAGAAAGTTACCAATAAGCACTGTTCGACCTCCACAAGAAAAACCAGTGCATAATGAGATCAATACGAGGGATGATTCAAGTGAGGAATCAGGTGGTGAGGATGATGTCATAGTGAGAATTGATTCACCAAGTGTGCTTTCGTTTCACCAGGTTCCATGA 3429 41.56 MAGVQLLEMFPYRELEEGATGSSDWNPTDAVLFVGLSLVLGIACRHLLRGTRVPYTVALLVLGIVLGSIEYGTHHRLGKIGDGIRLWAKIDPDLLLAVFLPALLFESSFSMEVHQIKRCLAQMILLAGPGVLISTFLLGSAFKLTFPYNWDWKTSLLLGGLLSATDPVAVVALLKELGASKKLNTIIEGESLMNDGTAIVVYQLFYQMVLGKSFNWGAIIKYLTQVSLGALGIGLAFGIASVLWLGFIFNDTVIEIALTLAVSYIAYFTAQEGADVSGVLAVMTLGMFYAAVARTAFKGDGQQSLHHFWEMVAYIANTLIFILSGVVIAEGVLGSKGILDDGASWGFLILLYAYVQASRVMVVGVLYPFLRYFGYGLDWKEATILTWSGLRGAVALSLSLSVKRSSDHSLYISSETGTLFVFFTGGIVFLTLIVNGSTTQFILHLLHMDKLSVAKKRILDYTKYEMLNKALDAFGDLGDDEELGPADWPTVKRYITSLSDVEGEPQHPHNAFESDQNVHSMNLRDIRIRLLNGVQAAYWGMLDEGRITQATANILMQSVDEALDLVANEPLCDWKGLKANVHFPNYYKFLQTSIFPQKLVTYFTVERLESGCYICAAFLRAHRIARRQLHEFIGDSDIASTVINESEAEGEEARKFLEDVRETFPQVLRVVKTRQVTYSVLNHLIEYVQNLEKVGLLEEKEMMHLHDAVQTDLKRLLRNPPLAKVPKMRNLISVHPFLGALPPLVREPLEVSTKEVMKLRGVTLYKEGSKPSGVWLISNGVVKWESKSMRNKFSLHPTFTHGSTLGLYELLTGKPCICDMITDSVVLAFFIEHDKFLSVLRSDPSVEDFLWQFHCSCQTLFPQVFEKMEMRDLRILVVERSVMTTYIAGETIEIPRHSIGFLLEGFIKSRGIQEELITSPAVLFSSHGNQSFHNMENSGMSGSSFSHQGSCYEVETRSRVIIFDMAALQSDNILNRSSSFIHPVDHPQRSLSRDHSALMSWPELFSKPRPPQKQKSDRTERPADSLSAKAMQLSIYGSMVDIRQRTKSFPGHIAEPSLSRSNPTIPSHKYVPFPSVKSEGAATMKKRLDARKLPISTVRPPQEKPVHNEINTRDDSSEESGGEDDVIVRIDSPSVLSFHQVP 1142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 40182002 40202497 - Lag0029578.1 Lac8g2191 618025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2191 1142 MobiDBLite consensus disorder prediction 1088 1131 - -
Lac8g2191 1142 Gene3D - 151 203 - -
Lac8g2191 1142 MobiDBLite consensus disorder prediction 1106 1126 - -
Lac8g2191 1142 Pfam Cyclic nucleotide-binding domain 760 843 IPR000595 -
Lac8g2191 1142 MobiDBLite consensus disorder prediction 1001 1027 - -
Lac8g2191 1142 ProSiteProfiles cAMP/cGMP binding motif profile. 737 840 IPR000595 -
Lac8g2191 1142 PANTHER SODIUM/HYDROGEN EXCHANGER 24 769 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0009941(PANTHER)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Lac8g2191 1142 MobiDBLite consensus disorder prediction 1010 1024 - -
Lac8g2191 1142 MobiDBLite consensus disorder prediction 1051 1072 - -
Lac8g2191 1142 Gene3D Jelly Rolls 723 856 IPR014710 -
Lac8g2191 1142 SUPERFAMILY cAMP-binding domain-like 726 851 IPR018490 -
Lac8g2191 1142 Pfam Sodium/hydrogen exchanger family 37 443 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Lac8g2191 1142 CDD CAP_ED 737 846 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g1161 Lac-Chr12:15396664 Lac8g2191 Lac-Chr8:40182002 8.10E-21 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2191 K14726 - csv:101209966 2036.92