Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2264 ATGGATTCTACGACAACCCCAAACGAAAACTCGGCGAATATCGAATTTTCTTGCGGCTCTCCCTCGCGGCCAAGTCAATCGTCAGTGCAATCGAAGCCCTCGATTCCGGATGTGGGTTCTAATGGTTCTGGATCGAAGCCCGTGATTCAAGGGTCTCGAGGTGCCGATTCCAGTTTCCAGAACGAGACTGACGAGGAAGATGTGAGGTTGGTTTACATCGATGATCCTGAAAAGACGAACGAGAATTCTGAGTTCGCTGGAAATTTGATTTGTACTGGCAAGTATACGATTCTAAATTTTCTGCCCAGGAATCTGTTTGAACAATTTCATAGAATTGCTTATGTTTATTTCCTTGTTGTTTCGGTTCTTAATCAACTCCCCCAGCTTTCCGTTTTTGGTCGGGGAGTCTCCATTTTGCCTCTAGCTTCTGTGCTGCTGGTTACAGCAGTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATGAGATTGAGAACAATCGTTTAGCTTTAGTTTTGGTGAATGGTGAGTTTCAATCGAAGAAATGGAAGGATATTAGAGTTGGTGAAATAATTAAAGTTGGTGCAAATGAGCCTATTCCTTGTGATATGATGCTTCTCTCAACCAGCGATTCTACAGGGGTTGCGTATTTGCAGACTCTGAATTTGGATGGGGAGCCAACTTTGAAAACCAAGTATGCAAGACAAGAAACAATGTTGAAAATTCATGACAAGGAAAAGATTGCTGGATTGATTAAATGTGGATATCCAAATAGGAATATCTATGAATTTTATATTGTTTTGGAGATTGATGGGATGCGTATGTCCCTTACACATTCAAGCATGGTTCTTCGTGGATGTGAGCTCAAGAATACTAGCTGGGCTGTTGGTGTTGCTGTATATGCTGGCCGTGAGACCAAAGCTATGCTTAACAGTTCTGTTGCTCCATTGAAAAGAAGCCGGCTCGAGACCCTGAAGGACATGGAGATTATGATACTCTCTTTGTTTCTTATTGCTTTGTGTTCAGTAGTTTGTGCTTTTGCTGCTGTTTGGTTCATCAGAAAGAGGGAAGATTTGGACATTTTACCTTATTTCAGAAAGAAGGATTTCTCAAAAGAACCACCTGAAACTTATAATTACAATGGCTGGGGATTTGATGCATTTTTTGTATTCCTCATGTCAGTCATTTTATTTCAGAGCATGATCCCAATTTCACTGTACATTTCAATGGAGGTTGTCCGCATTGCCCAGGCTTATTTCATGATTCGAGACACACAAATGTATGATGAAATTTCAAATTCAAGATTTCAGTGTCAGGCTTTGAACATAAATGAGGATTTAGGACAAATAAGGTATGTGTTTTTGGACAAAACAGGTACCCTTACTGAGAATAAGATGGAATTTCAATGTGCAAGCATTTGGGGAATCGATTATGGAGGTGAAAGAATCAATTCCTCTGACGACCAAGTTGGATTCTCTGTTCAGGTGAATGGAAAGGTTTTGAGACCAAAAGTGGCCGTCAAAACCAATTCTGAGCTTCTGCAGTTATTAAAATGCGGAAAGCACACCAAGGAAGGAAGACATATTCATGATTTCTTCCTCGCATTAGCAGCTTGCAATACCATTTTTCCTCTCATTACCGAAACTTCTGATCCTTCAGTGCAGTTAATTGACTACCAAGGGGAGTCTCCAGATGAACAGGCATTGGCTTATGCTGCTACAGCATATGGTTTTACGCTAATTGAACGAACTCCTGGCCATGCAGTTATTGACATACATGGTGAAAAGCAAAGGTATAATGTTTTGGGGATGCATGAGTTTGATAGTGACAGGAAGCGGATGTCGGTGGTACTGGGGTGCCCTGACATGACCTTCAAAGTATTTGTAAAAGGTGCTGATAGCTCCATGTTCAAGGTGATAGGTGAAACTCTGAACATGGATATTATTCAAGCGACTAAAGCTCATCTTCATTCGTACTCCTCAAAAGGTCTCAGGACACTAGTTATTGGGATGAAAGAACTTAGTCCTTCCGACTTCGAGAAATGGCACTTGATGTATGAGGAAGCCAGCACTGCTCTGGGTGGCAGGAGTACTCTGCTTCGCAAGGTTGCCAGCAGCATAGAAAACAATCTATGCATATTGGGTGCCTTAGGCATCAAAGATAAGTTGCAAAAAGGTGTGCCAGAAGCCATGGAATCTTTAAGAACGGCAGGAATTAAAGTATGGGTTTTGACTGGGGACAAGCAAGAAACTGTCGTATCAATTGGTTACTCCTCGAGGCTCTTAACAAACAAGATGGCTCAACTTATAATTAACAGCGACTCAGCAGAATCATGCAGAACGAGTTTAGAAAATGCAATAATCATGTTAAAGAAGCATGCCAGTATGTTAGATGTTACACTGGACAGTGGAAAAGGCATCGAAGCTGTAACACCTTCGGTTGCATTGATCATTGATGGTGCTAGCTTCGTATATATTCTCGAAGGTGAACTTGAAGAACAGTTTTTCGAACTAGCTTCTATCTGTACGGTTGTGTTATGTTCTCGGGTCGCTCCATTGCAGAAAGCTGGGATCGTTGCTCTTGTTAAGAGAAGGACCTCTGATGTGACACTTGCCTTTGGTGATGGTGCGAATGATGTGCGAATGATCCAAATGGCAGACGTGGGCATTGGTCTCAGTGGTCCAGAGGGTCAACAAGCTGTTAAGGCATCAGATTTTGCCATGGGGCAATTTAGATTCTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGCGGATGGGCTACATGATTCTGTGCAATTTCTACAGAAATGCAGTGTTTGTGCTTGTTTTATTTTGGTATGTTCTCTTTACTGGTTTCTCGTTGACGACGGCAATCAACCAATGGAGCAGTATGCTTTATACCATAATCTATACTTGTTTGCCCACAATTGTTGTTGGAATTCTTGACAAGGACTTAGGAAGAAGGACTCTTCTTAGTTACCCTCAGCTCTATGGGGCTGGCTACAGACAAGAGAGCTACAACTCTAGATTGTTTTGGTTAACCATGATTGACGCTGTGTGGCAAAGTATTGCTATTTTCTTCATCCCCCTCCTTGCATACTGGGCTACCACCATTGATGCTTCGAGCCTTGGGGATCTCTGGCTACTTGCACTGGTCATCGTTGTCAACTTGCACTTGGCGATGGATGTCGTTCGATGGCATTCCATCACCCATGCTGTGATCTGGGGATCCACTCTCACAACTGTCATTTGTGTCGTTATCCTTGATTCGTTAGTGTCACTCCCTGGTTATTGGTATGGTCCTCCTCCGACAATATAA 3333 42.42 MDSTTTPNENSANIEFSCGSPSRPSQSSVQSKPSIPDVGSNGSGSKPVIQGSRGADSSFQNETDEEDVRLVYIDDPEKTNENSEFAGNLICTGKYTILNFLPRNLFEQFHRIAYVYFLVVSVLNQLPQLSVFGRGVSILPLASVLLVTAVKDAYEDWRRHRSDEIENNRLALVLVNGEFQSKKWKDIRVGEIIKVGANEPIPCDMMLLSTSDSTGVAYLQTLNLDGEPTLKTKYARQETMLKIHDKEKIAGLIKCGYPNRNIYEFYIVLEIDGMRMSLTHSSMVLRGCELKNTSWAVGVAVYAGRETKAMLNSSVAPLKRSRLETLKDMEIMILSLFLIALCSVVCAFAAVWFIRKREDLDILPYFRKKDFSKEPPETYNYNGWGFDAFFVFLMSVILFQSMIPISLYISMEVVRIAQAYFMIRDTQMYDEISNSRFQCQALNINEDLGQIRYVFLDKTGTLTENKMEFQCASIWGIDYGGERINSSDDQVGFSVQVNGKVLRPKVAVKTNSELLQLLKCGKHTKEGRHIHDFFLALAACNTIFPLITETSDPSVQLIDYQGESPDEQALAYAATAYGFTLIERTPGHAVIDIHGEKQRYNVLGMHEFDSDRKRMSVVLGCPDMTFKVFVKGADSSMFKVIGETLNMDIIQATKAHLHSYSSKGLRTLVIGMKELSPSDFEKWHLMYEEASTALGGRSTLLRKVASSIENNLCILGALGIKDKLQKGVPEAMESLRTAGIKVWVLTGDKQETVVSIGYSSRLLTNKMAQLIINSDSAESCRTSLENAIIMLKKHASMLDVTLDSGKGIEAVTPSVALIIDGASFVYILEGELEEQFFELASICTVVLCSRVAPLQKAGIVALVKRRTSDVTLAFGDGANDVRMIQMADVGIGLSGPEGQQAVKASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILCNFYRNAVFVLVLFWYVLFTGFSLTTAINQWSSMLYTIIYTCLPTIVVGILDKDLGRRTLLSYPQLYGAGYRQESYNSRLFWLTMIDAVWQSIAIFFIPLLAYWATTIDASSLGDLWLLALVIVVNLHLAMDVVRWHSITHAVIWGSTLTTVICVVILDSLVSLPGYWYGPPPTI 1110
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 40864383 40868401 + Lag0029651.1 Lac8g2264 618098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2264 1110 MobiDBLite consensus disorder prediction 1 58 - -
Lac8g2264 1110 Pfam Phospholipid-translocating P-type ATPase C-terminal 902 1098 IPR032630 -
Lac8g2264 1110 SFLD p-type atpase 439 925 IPR044492 -
Lac8g2264 1110 SUPERFAMILY Calcium ATPase, transmembrane domain M 84 1094 IPR023298 -
Lac8g2264 1110 Gene3D - 711 914 IPR023214 -
Lac8g2264 1110 FunFam Phospholipid-transporting ATPase 143 312 - -
Lac8g2264 1110 ProSitePatterns E1-E2 ATPases phosphorylation site. 457 463 IPR018303 -
Lac8g2264 1110 Gene3D - 559 696 IPR023299 GO:0000166(InterPro)
Lac8g2264 1110 FunFam Phospholipid-transporting ATPase 559 692 - -
Lac8g2264 1110 CDD P-type_ATPase_APLT_Dnf-like 87 1034 - -
Lac8g2264 1110 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 60 1097 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Lac8g2264 1110 SUPERFAMILY HAD-like 442 915 IPR036412 -
Lac8g2264 1110 NCBIfam HAD-IC family P-type ATPase 845 958 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Lac8g2264 1110 SFLD C1.7: P-type atpase like 439 925 - -
Lac8g2264 1110 NCBIfam phospholipid-translocating P-type ATPase 85 1097 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Lac8g2264 1110 Pfam E1-E2 ATPase 171 357 - -
Lac8g2264 1110 Pfam Phospholipid-translocating ATPase N-terminal 71 137 IPR032631 -
Lac8g2264 1110 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 461 728 IPR023299 GO:0000166(InterPro)
Lac8g2264 1110 PRINTS P-type cation-transporting ATPase superfamily signature 874 893 - -
Lac8g2264 1110 PRINTS P-type cation-transporting ATPase superfamily signature 455 469 - -
Lac8g2264 1110 Pfam Cation transport ATPase (P-type) 563 639 - -
Lac8g2264 1110 SUPERFAMILY Calcium ATPase, transduction domain A 168 309 IPR008250 -
Lac8g2264 1110 MobiDBLite consensus disorder prediction 1 62 - -
Lac8g2264 1110 Gene3D - 142 313 - -
Lac8g2264 1110 FunFam Phospholipid-transporting ATPase 715 914 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac8g2264 Lac-Chr8:40864383 Lac8g2267 Lac-Chr8:40900203 0.00E+00 dispersed
Lac8g2263 Lac-Chr8:40857384 Lac8g2264 Lac-Chr8:40864383 0.00E+00 tandem
Lac8g2264 Lac-Chr8:40864383 Lac8g2265 Lac-Chr8:40876067 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2264 K14802 - csv:101212953 1727.61