Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac8g2264 | ATGGATTCTACGACAACCCCAAACGAAAACTCGGCGAATATCGAATTTTCTTGCGGCTCTCCCTCGCGGCCAAGTCAATCGTCAGTGCAATCGAAGCCCTCGATTCCGGATGTGGGTTCTAATGGTTCTGGATCGAAGCCCGTGATTCAAGGGTCTCGAGGTGCCGATTCCAGTTTCCAGAACGAGACTGACGAGGAAGATGTGAGGTTGGTTTACATCGATGATCCTGAAAAGACGAACGAGAATTCTGAGTTCGCTGGAAATTTGATTTGTACTGGCAAGTATACGATTCTAAATTTTCTGCCCAGGAATCTGTTTGAACAATTTCATAGAATTGCTTATGTTTATTTCCTTGTTGTTTCGGTTCTTAATCAACTCCCCCAGCTTTCCGTTTTTGGTCGGGGAGTCTCCATTTTGCCTCTAGCTTCTGTGCTGCTGGTTACAGCAGTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATGAGATTGAGAACAATCGTTTAGCTTTAGTTTTGGTGAATGGTGAGTTTCAATCGAAGAAATGGAAGGATATTAGAGTTGGTGAAATAATTAAAGTTGGTGCAAATGAGCCTATTCCTTGTGATATGATGCTTCTCTCAACCAGCGATTCTACAGGGGTTGCGTATTTGCAGACTCTGAATTTGGATGGGGAGCCAACTTTGAAAACCAAGTATGCAAGACAAGAAACAATGTTGAAAATTCATGACAAGGAAAAGATTGCTGGATTGATTAAATGTGGATATCCAAATAGGAATATCTATGAATTTTATATTGTTTTGGAGATTGATGGGATGCGTATGTCCCTTACACATTCAAGCATGGTTCTTCGTGGATGTGAGCTCAAGAATACTAGCTGGGCTGTTGGTGTTGCTGTATATGCTGGCCGTGAGACCAAAGCTATGCTTAACAGTTCTGTTGCTCCATTGAAAAGAAGCCGGCTCGAGACCCTGAAGGACATGGAGATTATGATACTCTCTTTGTTTCTTATTGCTTTGTGTTCAGTAGTTTGTGCTTTTGCTGCTGTTTGGTTCATCAGAAAGAGGGAAGATTTGGACATTTTACCTTATTTCAGAAAGAAGGATTTCTCAAAAGAACCACCTGAAACTTATAATTACAATGGCTGGGGATTTGATGCATTTTTTGTATTCCTCATGTCAGTCATTTTATTTCAGAGCATGATCCCAATTTCACTGTACATTTCAATGGAGGTTGTCCGCATTGCCCAGGCTTATTTCATGATTCGAGACACACAAATGTATGATGAAATTTCAAATTCAAGATTTCAGTGTCAGGCTTTGAACATAAATGAGGATTTAGGACAAATAAGGTATGTGTTTTTGGACAAAACAGGTACCCTTACTGAGAATAAGATGGAATTTCAATGTGCAAGCATTTGGGGAATCGATTATGGAGGTGAAAGAATCAATTCCTCTGACGACCAAGTTGGATTCTCTGTTCAGGTGAATGGAAAGGTTTTGAGACCAAAAGTGGCCGTCAAAACCAATTCTGAGCTTCTGCAGTTATTAAAATGCGGAAAGCACACCAAGGAAGGAAGACATATTCATGATTTCTTCCTCGCATTAGCAGCTTGCAATACCATTTTTCCTCTCATTACCGAAACTTCTGATCCTTCAGTGCAGTTAATTGACTACCAAGGGGAGTCTCCAGATGAACAGGCATTGGCTTATGCTGCTACAGCATATGGTTTTACGCTAATTGAACGAACTCCTGGCCATGCAGTTATTGACATACATGGTGAAAAGCAAAGGTATAATGTTTTGGGGATGCATGAGTTTGATAGTGACAGGAAGCGGATGTCGGTGGTACTGGGGTGCCCTGACATGACCTTCAAAGTATTTGTAAAAGGTGCTGATAGCTCCATGTTCAAGGTGATAGGTGAAACTCTGAACATGGATATTATTCAAGCGACTAAAGCTCATCTTCATTCGTACTCCTCAAAAGGTCTCAGGACACTAGTTATTGGGATGAAAGAACTTAGTCCTTCCGACTTCGAGAAATGGCACTTGATGTATGAGGAAGCCAGCACTGCTCTGGGTGGCAGGAGTACTCTGCTTCGCAAGGTTGCCAGCAGCATAGAAAACAATCTATGCATATTGGGTGCCTTAGGCATCAAAGATAAGTTGCAAAAAGGTGTGCCAGAAGCCATGGAATCTTTAAGAACGGCAGGAATTAAAGTATGGGTTTTGACTGGGGACAAGCAAGAAACTGTCGTATCAATTGGTTACTCCTCGAGGCTCTTAACAAACAAGATGGCTCAACTTATAATTAACAGCGACTCAGCAGAATCATGCAGAACGAGTTTAGAAAATGCAATAATCATGTTAAAGAAGCATGCCAGTATGTTAGATGTTACACTGGACAGTGGAAAAGGCATCGAAGCTGTAACACCTTCGGTTGCATTGATCATTGATGGTGCTAGCTTCGTATATATTCTCGAAGGTGAACTTGAAGAACAGTTTTTCGAACTAGCTTCTATCTGTACGGTTGTGTTATGTTCTCGGGTCGCTCCATTGCAGAAAGCTGGGATCGTTGCTCTTGTTAAGAGAAGGACCTCTGATGTGACACTTGCCTTTGGTGATGGTGCGAATGATGTGCGAATGATCCAAATGGCAGACGTGGGCATTGGTCTCAGTGGTCCAGAGGGTCAACAAGCTGTTAAGGCATCAGATTTTGCCATGGGGCAATTTAGATTCTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGCGGATGGGCTACATGATTCTGTGCAATTTCTACAGAAATGCAGTGTTTGTGCTTGTTTTATTTTGGTATGTTCTCTTTACTGGTTTCTCGTTGACGACGGCAATCAACCAATGGAGCAGTATGCTTTATACCATAATCTATACTTGTTTGCCCACAATTGTTGTTGGAATTCTTGACAAGGACTTAGGAAGAAGGACTCTTCTTAGTTACCCTCAGCTCTATGGGGCTGGCTACAGACAAGAGAGCTACAACTCTAGATTGTTTTGGTTAACCATGATTGACGCTGTGTGGCAAAGTATTGCTATTTTCTTCATCCCCCTCCTTGCATACTGGGCTACCACCATTGATGCTTCGAGCCTTGGGGATCTCTGGCTACTTGCACTGGTCATCGTTGTCAACTTGCACTTGGCGATGGATGTCGTTCGATGGCATTCCATCACCCATGCTGTGATCTGGGGATCCACTCTCACAACTGTCATTTGTGTCGTTATCCTTGATTCGTTAGTGTCACTCCCTGGTTATTGGTATGGTCCTCCTCCGACAATATAA | 3333 | 42.42 | MDSTTTPNENSANIEFSCGSPSRPSQSSVQSKPSIPDVGSNGSGSKPVIQGSRGADSSFQNETDEEDVRLVYIDDPEKTNENSEFAGNLICTGKYTILNFLPRNLFEQFHRIAYVYFLVVSVLNQLPQLSVFGRGVSILPLASVLLVTAVKDAYEDWRRHRSDEIENNRLALVLVNGEFQSKKWKDIRVGEIIKVGANEPIPCDMMLLSTSDSTGVAYLQTLNLDGEPTLKTKYARQETMLKIHDKEKIAGLIKCGYPNRNIYEFYIVLEIDGMRMSLTHSSMVLRGCELKNTSWAVGVAVYAGRETKAMLNSSVAPLKRSRLETLKDMEIMILSLFLIALCSVVCAFAAVWFIRKREDLDILPYFRKKDFSKEPPETYNYNGWGFDAFFVFLMSVILFQSMIPISLYISMEVVRIAQAYFMIRDTQMYDEISNSRFQCQALNINEDLGQIRYVFLDKTGTLTENKMEFQCASIWGIDYGGERINSSDDQVGFSVQVNGKVLRPKVAVKTNSELLQLLKCGKHTKEGRHIHDFFLALAACNTIFPLITETSDPSVQLIDYQGESPDEQALAYAATAYGFTLIERTPGHAVIDIHGEKQRYNVLGMHEFDSDRKRMSVVLGCPDMTFKVFVKGADSSMFKVIGETLNMDIIQATKAHLHSYSSKGLRTLVIGMKELSPSDFEKWHLMYEEASTALGGRSTLLRKVASSIENNLCILGALGIKDKLQKGVPEAMESLRTAGIKVWVLTGDKQETVVSIGYSSRLLTNKMAQLIINSDSAESCRTSLENAIIMLKKHASMLDVTLDSGKGIEAVTPSVALIIDGASFVYILEGELEEQFFELASICTVVLCSRVAPLQKAGIVALVKRRTSDVTLAFGDGANDVRMIQMADVGIGLSGPEGQQAVKASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILCNFYRNAVFVLVLFWYVLFTGFSLTTAINQWSSMLYTIIYTCLPTIVVGILDKDLGRRTLLSYPQLYGAGYRQESYNSRLFWLTMIDAVWQSIAIFFIPLLAYWATTIDASSLGDLWLLALVIVVNLHLAMDVVRWHSITHAVIWGSTLTTVICVVILDSLVSLPGYWYGPPPTI | 1110 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 40864383 | 40868401 | + | Lag0029651.1 | Lac8g2264 | 618098 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac8g2264 | 1110 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Lac8g2264 | 1110 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 902 | 1098 | IPR032630 | - | |
Lac8g2264 | 1110 | SFLD | p-type atpase | 439 | 925 | IPR044492 | - | |
Lac8g2264 | 1110 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 84 | 1094 | IPR023298 | - | |
Lac8g2264 | 1110 | Gene3D | - | 711 | 914 | IPR023214 | - | |
Lac8g2264 | 1110 | FunFam | Phospholipid-transporting ATPase | 143 | 312 | - | - | |
Lac8g2264 | 1110 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 457 | 463 | IPR018303 | - | |
Lac8g2264 | 1110 | Gene3D | - | 559 | 696 | IPR023299 | GO:0000166(InterPro) | |
Lac8g2264 | 1110 | FunFam | Phospholipid-transporting ATPase | 559 | 692 | - | - | |
Lac8g2264 | 1110 | CDD | P-type_ATPase_APLT_Dnf-like | 87 | 1034 | - | - | |
Lac8g2264 | 1110 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 60 | 1097 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) | |
Lac8g2264 | 1110 | SUPERFAMILY | HAD-like | 442 | 915 | IPR036412 | - | |
Lac8g2264 | 1110 | NCBIfam | HAD-IC family P-type ATPase | 845 | 958 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac8g2264 | 1110 | SFLD | C1.7: P-type atpase like | 439 | 925 | - | - | |
Lac8g2264 | 1110 | NCBIfam | phospholipid-translocating P-type ATPase | 85 | 1097 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
Lac8g2264 | 1110 | Pfam | E1-E2 ATPase | 171 | 357 | - | - | |
Lac8g2264 | 1110 | Pfam | Phospholipid-translocating ATPase N-terminal | 71 | 137 | IPR032631 | - | |
Lac8g2264 | 1110 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 461 | 728 | IPR023299 | GO:0000166(InterPro) | |
Lac8g2264 | 1110 | PRINTS | P-type cation-transporting ATPase superfamily signature | 874 | 893 | - | - | |
Lac8g2264 | 1110 | PRINTS | P-type cation-transporting ATPase superfamily signature | 455 | 469 | - | - | |
Lac8g2264 | 1110 | Pfam | Cation transport ATPase (P-type) | 563 | 639 | - | - | |
Lac8g2264 | 1110 | SUPERFAMILY | Calcium ATPase, transduction domain A | 168 | 309 | IPR008250 | - | |
Lac8g2264 | 1110 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Lac8g2264 | 1110 | Gene3D | - | 142 | 313 | - | - | |
Lac8g2264 | 1110 | FunFam | Phospholipid-transporting ATPase | 715 | 914 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac8g2264 | Lac-Chr8:40864383 | Lac8g2267 | Lac-Chr8:40900203 | 0.00E+00 | dispersed | |
Lac8g2263 | Lac-Chr8:40857384 | Lac8g2264 | Lac-Chr8:40864383 | 0.00E+00 | tandem | |
Lac8g2264 | Lac-Chr8:40864383 | Lac8g2265 | Lac-Chr8:40876067 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac8g2264 | K14802 | - | csv:101212953 | 1727.61 |