Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2265 ATGGATTCTGCCACCCCAAATGACAGCACGGCGGAGATCGAACTCGCTTGCGGCTCTTCCTCGGGGCCAACTCAACCGTCACTGCAATCGAAGTCCTCGATTCCGGAAGTGGGTTCTAGCGGTTCTGGATCGAAGCCTGCCCTTCAAGGGCTTCGAGGTGCCGGCCCCATGTTCCAGAACGAGATCGGCGATGAACGTATGAGGTTGGTTTACATCGACGATCCTGAAAAGACGAACGAGAACTTTGAATTCGCGGGAAATTCGATTCGTACTGGCAAGTATTCGATTCTAACTTTTCTGCCCAGGAATCTGTTTGAACAATTTCATAGAATTGCTTATGTATATTTCCTTGTTGTTGCGGTTCTTAATCAACTTCCCCAGCTTGCCGTTTTTGGTCGGGGAGTTTCCATTTTTCCTCTAGCCATTGTGCTGCTTGTTACTGCAGCTAAAAATGCACATGAGGATTGGGGAAGGCATTGTTCTGATAGAATCGAGAACAATCGGTTAGCTTCAGTCTTGGTGAATGGTGAGTTTCAACAGAAGAAATGGAAGGATATTAGAGTTGGTGAGATTATTAAAATTGGTGAAAATGATCCCATTCCATGTGATATGGTGCTTCTCTCAACCAGTGATTCTGCTGGGCTTGCGTTTGTGCAGACTCTGAATTTGGATGGGGAAGCAGCTTTGAAAACCAAGTACGCAAAACAAGAAACAATGTCGAAAATGCCTGACAAGGAGAAGATTACTGGCTTGATTAAATGTGATCGACCCAATAGGAGTATCTTTGGATTCTATGTGATTATGGAGATTGATGGGAAGCGTCTGTCCCTTGGATATCCAAACATAGTTCTTCGTGGCAGTGAGCTCAAGAATACCAGCTGGGCTGTTGGTGTTGCTGTATATGCTGGTCATGAGACAAAAGCCATGCTTAATAGTTCCAGAGCTCCATCAAAAAGAAGCCGGCTTGCGATGCGCAAGAACATGGAGATTATTATACTCTCTTGCTTTCTTATTGCCTTGTGCATTATTGTTTGTGTCTGTGCGGCTGTTTGGTTTATTAGAAAAGGGGAAGATTTGGACATTTTGCCTTATTTCAGAAAGAAAGATTTCTCGAAAGACCCACCTGAAACCTATAGTTACTATGGCAGGGGATTGGATGCATTTTTTGTATTCCTCATGTCAGTCATTATGTTTCAGAACATGATCCCCATTTCACTGTACATTTCAATGGAGCTTGTTCACTTCGGCCAGGCATATTTCATGAACCGAGACACCCAACTGTATGACGAAACATCGAATTCAAGATTTCAGTGTCGGACTATGAACATAAATGAGGATTTAGGACAAATAAAGTATGTGTTTTCGGACAAAACAGGTACCCTAACTGAGAATAAGATGGAACTTCGATGTGCAAGCATCTTGGGGGTTGATTATGGAGGTGAAAGCACCAATCCCCTAGATGAGCAAATTGGATACTCTGTTCAAGTGAATGGAAAGGTTTTGAGACCAAAATTGGCTGTCAAAACCAATCCTGAGCTTCTTCAGTTATTGAAAGGTGGAAAGCACACCAAGGATGGAAGATATATTCATGATTACTTCCTCGCATTAGCTGCTTGCAATACCATCATTCCTGTCATTACTGAAACTTCTGATCCTTTGGTGCAATTAATTAACTACGAAGGAGAGTCTCCAGATGAACAGGCATTGGTTTATGCTGCTGCGGCATATGGTTTCATGTTAATTGAACGAACTTCTGGCCATATAGTTATTGACATAAATGGTGAAAAGCAAAGTTATAAAGTTTTAGGTATGCACGAGTTTGATAGTGTCAGGAAGCGGATGTCAGTGATATTGGGGTGCCCTGATGAGACCTTCAAGTTATTGGTTAAAGGAGTTGATACCTCCATGTTCACGGTCATAGGTAAAACTCTGAACATGGATATAGTTGAAGCAACTAAAGCTCATATTCATTCGTACTCCTCAAAGGGTCTCAGGACACTAGTTATTGGGATGAAAGAGCTCAGTCCTTCCGACTTCGACCAATGGCACTTGATGTATGAGGAAGCAAGCACTGCTCTGCATAGCAGGGCTGCTCTGCTTCGCAAGGTTGCCGAAAGCATAGAAAACAAGTTAAGTGTACTGGGTGCCTCAGGCATTGAGGATAAGTTGCAAAAAGGTGTGCCAGAAGCCATCGATTCTTTGAGAACGGCAGGAATTAAAGTGTGGGTTTTGACTGGGGACAACCAAGAAACTGCCATATCAATTGGTTACTCCTCGAAGCTCTTAACAAACAAGATGGCCCAAATTATAATTAATGGCAAGTCGACAGAATCATGCAGAAGGAGTTTAGAAAACGCAATAATCATGGTGAAGAAGCATGCTAATGTGTCAGGGATTACACTGAACAGTGGAAAAAGCACTGAAGAATTGATACCTTCGATTGTGTTGATCATTGACGGTACAAGTCTTGTTTATATTCTCGATAGTGTACTTGAAGAACTGTTTCTCGAACTAGCTTGTATCTGTTCAGTTGTGTTATGTTGTCGTCTAGCCCCTTTGCAAAAAGCTGGCATTGTTGCTCTCGTTAAGGGAAGGACTTCTGACGCGACACTTGCAATTGGTGATGGCGCAAATGACGTGCCAATGATCCAAATGGCAGATGTTGGCATTGGTATTAGCGGCCTACAGGGTCAACAGGCCTCTATGGCATCGGATTTTGCCATAGGGCAATTTAGATTCTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCGGCGGATGGGCTACATGATTTTGTGCAACTTTTACAGAAATGCAGTGTTTGTGCTTGTTTTATTTTGGTATGTTCTCTTTTCCGGTTTCTCGTTGTCGATGGCAATCAACCAATGGAGCAGTGTGCTCTACTCTGTAATCTATACTTGTTTGACCACAATTTTTGTTGCAATCCTTGACAAGGACCTGGGTAGAAGAACTCTTCTTAGTTACCCTCAGCTCTATGGGGCTGGCCACAGACAGGAGAGCTACAACTCTGGTTTGTTTTGGTTAACAATGATAGACAGTGTGTGGCAAAGCATTGCTATTTTCTTCATCCCCCTCCTTGCATACTGGGGTACCGACATAGATGTTTCAAGCCTTGGGGATATTTGGCTACTTGCTGTGGTCATCGTTGTCAACGTGCAGTTGGCGATGGACGTTATTCGATGGCATTCCATCACCCATGTTATGATCTGGGGATCCACTCTTGCAACTGTTACTTGTGTCATTGTCTTTGATTCATTACAGTCACTTCCCAGTTATTGGTATGGTCCTCCTTCGACAATATAG 3330 43.15 MDSATPNDSTAEIELACGSSSGPTQPSLQSKSSIPEVGSSGSGSKPALQGLRGAGPMFQNEIGDERMRLVYIDDPEKTNENFEFAGNSIRTGKYSILTFLPRNLFEQFHRIAYVYFLVVAVLNQLPQLAVFGRGVSIFPLAIVLLVTAAKNAHEDWGRHCSDRIENNRLASVLVNGEFQQKKWKDIRVGEIIKIGENDPIPCDMVLLSTSDSAGLAFVQTLNLDGEAALKTKYAKQETMSKMPDKEKITGLIKCDRPNRSIFGFYVIMEIDGKRLSLGYPNIVLRGSELKNTSWAVGVAVYAGHETKAMLNSSRAPSKRSRLAMRKNMEIIILSCFLIALCIIVCVCAAVWFIRKGEDLDILPYFRKKDFSKDPPETYSYYGRGLDAFFVFLMSVIMFQNMIPISLYISMELVHFGQAYFMNRDTQLYDETSNSRFQCRTMNINEDLGQIKYVFSDKTGTLTENKMELRCASILGVDYGGESTNPLDEQIGYSVQVNGKVLRPKLAVKTNPELLQLLKGGKHTKDGRYIHDYFLALAACNTIIPVITETSDPLVQLINYEGESPDEQALVYAAAAYGFMLIERTSGHIVIDINGEKQSYKVLGMHEFDSVRKRMSVILGCPDETFKLLVKGVDTSMFTVIGKTLNMDIVEATKAHIHSYSSKGLRTLVIGMKELSPSDFDQWHLMYEEASTALHSRAALLRKVAESIENKLSVLGASGIEDKLQKGVPEAIDSLRTAGIKVWVLTGDNQETAISIGYSSKLLTNKMAQIIINGKSTESCRRSLENAIIMVKKHANVSGITLNSGKSTEELIPSIVLIIDGTSLVYILDSVLEELFLELACICSVVLCCRLAPLQKAGIVALVKGRTSDATLAIGDGANDVPMIQMADVGIGISGLQGQQASMASDFAIGQFRFLVPLLLVHGHWNYRRMGYMILCNFYRNAVFVLVLFWYVLFSGFSLSMAINQWSSVLYSVIYTCLTTIFVAILDKDLGRRTLLSYPQLYGAGHRQESYNSGLFWLTMIDSVWQSIAIFFIPLLAYWGTDIDVSSLGDIWLLAVVIVVNVQLAMDVIRWHSITHVMIWGSTLATVTCVIVFDSLQSLPSYWYGPPSTI 1109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 40876067 40880108 + Lag0029652.1 Lac8g2265 618099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2265 1109 PRINTS Sodium/potassium-transporting ATPase signature 950 970 - -
Lac8g2265 1109 PRINTS Sodium/potassium-transporting ATPase signature 447 468 - -
Lac8g2265 1109 Gene3D - 711 913 IPR023214 -
Lac8g2265 1109 SUPERFAMILY Calcium ATPase, transmembrane domain M 85 1092 IPR023298 -
Lac8g2265 1109 CDD P-type_ATPase_APLT_Dnf-like 86 1033 - -
Lac8g2265 1109 SFLD C1.7: P-type atpase like 438 924 - -
Lac8g2265 1109 SFLD p-type atpase 438 924 IPR044492 -
Lac8g2265 1109 FunFam Phospholipid-transporting ATPase 714 913 - -
Lac8g2265 1109 Pfam Cation transport ATPase (P-type) 562 636 - -
Lac8g2265 1109 MobiDBLite consensus disorder prediction 1 46 - -
Lac8g2265 1109 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Lac8g2265 1109 Pfam Phospholipid-translocating ATPase N-terminal 70 136 IPR032631 -
Lac8g2265 1109 MobiDBLite consensus disorder prediction 1 47 - -
Lac8g2265 1109 FunFam Phospholipid-transporting ATPase 558 691 - -
Lac8g2265 1109 Gene3D - 150 311 - -
Lac8g2265 1109 Pfam Phospholipid-translocating P-type ATPase C-terminal 902 1097 IPR032630 -
Lac8g2265 1109 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 63 1095 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Lac8g2265 1109 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Lac8g2265 1109 PRINTS P-type cation-transporting ATPase superfamily signature 873 892 - -
Lac8g2265 1109 Pfam E1-E2 ATPase 170 357 - -
Lac8g2265 1109 NCBIfam HAD-IC family P-type ATPase 840 959 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Lac8g2265 1109 SUPERFAMILY Calcium ATPase, transduction domain A 167 308 IPR008250 -
Lac8g2265 1109 SUPERFAMILY HAD-like 442 914 IPR036412 -
Lac8g2265 1109 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 727 IPR023299 GO:0000166(InterPro)
Lac8g2265 1109 Gene3D - 553 690 IPR023299 GO:0000166(InterPro)
Lac8g2265 1109 NCBIfam phospholipid-translocating P-type ATPase 84 1096 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac8g2265 Lac-Chr8:40876067 Lac2g0394 Lac-Chr2:2889004 2.00E-09 dispersed
Lac8g2265 Lac-Chr8:40876067 Lac8g2267 Lac-Chr8:40900203 0.00E+00 proximal
Lac8g2264 Lac-Chr8:40864383 Lac8g2265 Lac-Chr8:40876067 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2265 K14802 - csv:101212953 1726.84