Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2327 ATGGCAGCGCCAAAGCCTCGCACCACTCGCTCCAGGTCTCACAGGGAGGTTCCGGATTTGGAGAAGATGGACGGTGCTTACAGTTGGGACGCCCTCGAATGGACCAAGATTGAGCCCGTTCCGCGGTCGGTTTCGCGTGTGAACTTGGATTGCTTGCTTGAAGCCGAACAAGTGATTGCTGAGGGCTATGGTGTTGTTCTTGTAAATACTGATGAGGCGGGTACACTGTTTGTAACCAATTTTCGTCTTCTCTTTCTAAGTGAAGGAACCATGGATGTTATTGCCCTTGGCACTATACCACTGGCGGCAATTGATAAATTCAACAAAATAGTTGTGAAGACAAATTCTGTCTCTCGCCAATCTGAAAAGTCTACATCTAGACGACTTCTTCAGGTCATTGGAAAAGACATGAGAATTATTGTCTTTGGTTTTCGTCCAAGAACAAAACAGAGGCGTAAAGTATATGATGCATTATTGAAGTGTATGAAACCTGCAAGGATATGGGATCTATATGCATTCAAGTCCGGACCATCCAAGTACAGTAATACAGACCCAAAAGTTCGTTTGCTAAATGAGTATTTTCGGCTTCTTGGAAAGGGTTCCCTTCGTGCATCAATGAGTATGATTGAAGATGGATCATTTACATTGTCCAATGAATTGTGGAGAATAACTAACATCAATTCGAATTATACTCTGTGTCAGAGTTATCCATTTGCGTTGGTTGTTCCAAAACACATTAGTGATGAAGAAATGTTGCAGGCTTCTACCTTTCGTGCTAGATGTCGTTTGCCTGTTGTTTCGTGGTGCAATCCTGGTACTGGAGCTGTTCTTGCCCGTTCATCTCAACCTTTAGTTGGTCTGATGATGAATATGAGAAGTAATACTGATGAAAAGCTTGTTGCTGAGCTTTGCTCGCATCTTGGTGGTGTTCAAGGGTCATCACGTAGGAAGCTTTATATAGCTGATGCAAGGCCTAGAAAAAATGCTTTAGCTAATGGAGCTATGGGAGGTGGCTCGGAATCTTCATCAAATTATTTTCAATGTGAGATAGTTTTTTTTGGGATTGACAACATACATGCAATGAGGGAAAGTCTTACTCGGCTCAGAGAGTACTTGGATACTCATGGTGCAAAATCATCTGATGGAATGTCATCATTCTTGAGACATGGTGGATGGACTTGGGGCGGAGGTAATCTTAGTAGCATGTCTGCATCTGTATCGACTCTAGGAGATAGTGGCTGGTTAATCCATGTTCAAAGTGTCTTGGCTGGTTCAGCATGGATTGCTGCACGTGTTGCTTTGGAAAAAGCAACAGTGCTAGTTCATTGTAGTGATGGTTGGGACAGAACATCACAACTAGTTTCACTTGCTAGCTTACTACTTGATCCTTATTATCGGACATTCGCTGGATTTCAGGCACTAGTTGAAAAGGATTGGCTGGCATTTGGTCATCCTTTCTCAGATCGGTCTGGCACACCAACCATATCGGGAAGCGGTAACATGCCGTATGAACTCTCTAGGCAGTCTTCAACTGGAAGTTTACCTCCTTCACCTATGCGTCAGCCATCAGGATCATTCACATCTCAAGCTTCGAGTCCTCCACATGCACAAACATCAAACAACTGTTCTCCCATCTTTTTACAGTGGGTTGATTGTGTTTCACAACTTCTGCGCATGTATCCCTTTGCTTTTGAGTTCTCTTCAGCATTCCTGGTGGATCTGTTGGATGGTATGCTTTCCTGTCGCTTTGGGAACTTCTTGTGCAATTGTGAGAAGGAGCGGCAGCAATGTGCAGTTTCTGAAGTTTGCGGCTGTTTATGGGCGTATTTAGCTGATTTACGAGCTTCGGAAGGAAGTTCACATGTGCATTATAACCTCTTCTACGATCCAACCAAACATGAAGGGCCTCTCTTACCTCCTGCAGCAGCTCTAGCTCCAACTCTTTGGCCACAGTTCCATCTTCGTTGGGCTTGTCCTAAGGAATCCCAAGCTGGGGAACTTGAAGCAAGATGCAGGAGAATGGCTATAAAATTCTCTGAAATGCAGAAGGACAAAGAAATAGCCGAGAGAAAAGCCCAAGAGATGACATCTGCCATGGAATCATTAAAAGCAGAGTTGCAAAACGAGAAACAATCAAGTATATCTGCTATGAATGTAGCAAAAAGTGCAAGCAAAGAATGTGAAGCCATAAAGAGAGCAATTCAGTCTCTAGGCTGCAAGGTTGAAGTTTCTAGTAATGGTTATTGTACTGTTGACATTGAGGGCGACCTGATAAAATCCAATCAGAAAATTCATCCTGCTTCAAGAAAGGTTTCACATCGTTCACTGTCTGTTAGTGGAGAGAATGACCTCCCCCTTTCTATCACAGTTACAGCAGATGATGTGCCAAGCAACCCTCTCGGTCACGTCTGTGAAGCTCTTTGCCCGTTGCGCACTCGGGACGGAGGGTGCCGGTGGCCCGATGCTGGTTGTGCTCGTTTGGGTAGCCAATTTATTGGACTGAAGGCAAATTTCGATGCATTTGATAAACTATCCCTATACGATGGTTATTTCAAGCCAGAGTGA 2565 44.09 MAAPKPRTTRSRSHREVPDLEKMDGAYSWDALEWTKIEPVPRSVSRVNLDCLLEAEQVIAEGYGVVLVNTDEAGTLFVTNFRLLFLSEGTMDVIALGTIPLAAIDKFNKIVVKTNSVSRQSEKSTSRRLLQVIGKDMRIIVFGFRPRTKQRRKVYDALLKCMKPARIWDLYAFKSGPSKYSNTDPKVRLLNEYFRLLGKGSLRASMSMIEDGSFTLSNELWRITNINSNYTLCQSYPFALVVPKHISDEEMLQASTFRARCRLPVVSWCNPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAELCSHLGGVQGSSRRKLYIADARPRKNALANGAMGGGSESSSNYFQCEIVFFGIDNIHAMRESLTRLREYLDTHGAKSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSVLAGSAWIAARVALEKATVLVHCSDGWDRTSQLVSLASLLLDPYYRTFAGFQALVEKDWLAFGHPFSDRSGTPTISGSGNMPYELSRQSSTGSLPPSPMRQPSGSFTSQASSPPHAQTSNNCSPIFLQWVDCVSQLLRMYPFAFEFSSAFLVDLLDGMLSCRFGNFLCNCEKERQQCAVSEVCGCLWAYLADLRASEGSSHVHYNLFYDPTKHEGPLLPPAAALAPTLWPQFHLRWACPKESQAGELEARCRRMAIKFSEMQKDKEIAERKAQEMTSAMESLKAELQNEKQSSISAMNVAKSASKECEAIKRAIQSLGCKVEVSSNGYCTVDIEGDLIKSNQKIHPASRKVSHRSLSVSGENDLPLSITVTADDVPSNPLGHVCEALCPLRTRDGGCRWPDAGCARLGSQFIGLKANFDAFDKLSLYDGYFKPE 854
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 41409666 41423644 + Lag0029714.1 Lac8g2327 618161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2327 854 SUPERFAMILY PH domain-like 51 174 - -
Lac8g2327 854 Pfam Myotubularin-like phosphatase domain 215 595 IPR010569 -
Lac8g2327 854 SMART gram2001c 43 111 IPR004182 -
Lac8g2327 854 ProSitePatterns Tyrosine specific protein phosphatases active site. 441 451 IPR016130 GO:0016311(InterPro)
Lac8g2327 854 Coils Coil 678 712 - -
Lac8g2327 854 CDD PTP-MTM-like 261 555 - -
Lac8g2327 854 Gene3D - 63 162 IPR011993 -
Lac8g2327 854 ProSiteProfiles Myotubularin phosphatase domain. 198 653 IPR010569 -
Lac8g2327 854 MobiDBLite consensus disorder prediction 491 538 - -
Lac8g2327 854 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 215 657 IPR029021 -
Lac8g2327 854 PANTHER MYOTUBULARIN-RELATED 50 785 IPR030564 GO:0004438(PANTHER)|GO:0106018(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2327 K18081 - csv:101204839 1581.23