Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2375 ATGGAGGTCACCGGAACCGGCGCCGGAGGAGGAGCAGCAGCAGCAGCAGGAAGCGAGAAACGGCGTCGTTCGATCACAGCAATAGCAACATCCTTCTTCATCGACGTGCTCACCGGACCTTGGTTCATGGTGTTCGCCTCATTCCTAATCATGTCCACGGCCGGAACGCCGTACATGTTCGGCCTGTACTCCGGCGCGATAAAATCCGTCCTCGGCTACGACCAGAGCACTCTGAATCTGATCGGCTTCTTCAAAGACGTAGGCACGAACGTCGGAATACCTTCCGGCCTAATCGCGGAAATCACGCCGCCGTGGGTGGTTCTGGCGATCGGCGCGGGCATGAACTTCTTCGGATACTTCATGATTTGGCTGTCGGTGACGGAGAAGGTGGCGGCGCCGGCGGTGTGGGTGATGTGCGTTTACATTTGCCTGGGGGCGAATTCGACGGCGTTTGCGAACACAGGCGCGCTGGTGACTTGCGTGAAGAATTATCCGGCGAGAAGAGGCGTGGTTCTAGGGATTTTGAAAGGATATATCGGATTGAGCGGTGCAATTTTGACGCAGATTTATCATGCGATCTACGGCGATGATTCGAAATCGTTGATTCTGCTTATCGCTTGGCTTCCGGCGGTGATTTCCGTCGCGTTCTTGCGGACGATTCGGATTTTGAAGGTGGATCATCAGCCCAATGAACTCAGAGTTTTTTACAGGTTTCTGTACATTTCTCTTGGCCTCGCCGGATTTCTCATGGTGATGATAATCCTTCAGCGAAAATTCAATTTCTCCCACATCGAGTACAGTGGCAGCGCCGCCATGGTCGTCTTCCTCCTCTTCTTTCCCCTCTTCGTCGTCATCGCCGAAGACTACAAAATTTGGCAAAAAAAGCTCTCACAACTCCAAAATCCTCCTCCTCTCACCGTCATCACCCAAAAACCACCGCCGCCGCCGCAGCAGCATTTTCAGGCAACCCTCCAAATGCCCGTAAAACCGCCGCCTACGCCGTCCTGCTGGAGAACCGCCCTGAAGCCGCCGCCGAGAGGCGAAGATTTCACGATTCTCCAAGCGCTCTTCAGCGCCGACATGCTCCTCCTCTTCCTCTCCACCGCGTGCGGCGTCGGCGGCACTCTCACCGCCATCGACAACCTCGGCCAAATCGGCGACTCTCTCCGGTACCCTAAACAGAGCATCAGCACATTCGTTTCACTTGTAAGCATCTGGAATTACCTAGGGCGCGTAGTCTCGGGTTTCGCCTCTGAAATCGTCCTCACCAAATACAAATTCCCTCGAACCCTAATTCTCACCCTGATCCTCCTCCTCTCCTGCGCCGGCCACCTCCTCATCGCCTTCAATCCCGCCGGCGGCCTCTACGTCGCCTCAATCATAATCGGATTCTGCTACGGCGCCCAGTGGCCGATCCTATTCGCCATAATTTCCGAGATCTTCGGCCTCAAATACTACTCGACTCTCTACAATTTCGGGTCCGTTGCGAGTCCGATCGGGCTGTATTTCCTCGACGTTCGGGTCGCCGGACGTTTGTACGACAAGGAGGCCGAGCGGCAGCTGGCGGCGGCGGGGAGGAGGAGGATGGCCGGAGAATCGTTGAACTGCGAGGGCGTGGATTGCTTTAAACTGTCGTTCATCATAATCACTGGAGTTACTTTGATCGGGGCTCTGTTTTCGTTCGTTCTGGTGATTCGAACCAGAGCTTTTTATAAGACTGATATTTACAGGAAGTTTAGGGATGAAGATGAAGAAGAAGATGCAGAGCTGAGTGAAATGGCAGCTGGAAACGGCGTCGTTTCGAATGATCAAAGAAATGGGGAAAGGAAATAA 1833 54.12 MEVTGTGAGGGAAAAAGSEKRRRSITAIATSFFIDVLTGPWFMVFASFLIMSTAGTPYMFGLYSGAIKSVLGYDQSTLNLIGFFKDVGTNVGIPSGLIAEITPPWVVLAIGAGMNFFGYFMIWLSVTEKVAAPAVWVMCVYICLGANSTAFANTGALVTCVKNYPARRGVVLGILKGYIGLSGAILTQIYHAIYGDDSKSLILLIAWLPAVISVAFLRTIRILKVDHQPNELRVFYRFLYISLGLAGFLMVMIILQRKFNFSHIEYSGSAAMVVFLLFFPLFVVIAEDYKIWQKKLSQLQNPPPLTVITQKPPPPPQQHFQATLQMPVKPPPTPSCWRTALKPPPRGEDFTILQALFSADMLLLFLSTACGVGGTLTAIDNLGQIGDSLRYPKQSISTFVSLVSIWNYLGRVVSGFASEIVLTKYKFPRTLILTLILLLSCAGHLLIAFNPAGGLYVASIIIGFCYGAQWPILFAIISEIFGLKYYSTLYNFGSVASPIGLYFLDVRVAGRLYDKEAERQLAAAGRRRMAGESLNCEGVDCFKLSFIIITGVTLIGALFSFVLVIRTRAFYKTDIYRKFRDEDEEEDAELSEMAAGNGVVSNDQRNGERK 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 41858954 41863257 - Lag0029762.1 Lac8g2375 618209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2375 610 MobiDBLite consensus disorder prediction 587 610 - -
Lac8g2375 610 Pfam Nodulin-like 40 285 IPR010658 -
Lac8g2375 610 CDD MFS_Mch1p_like 39 557 - -
Lac8g2375 610 SUPERFAMILY MFS general substrate transporter 40 570 IPR036259 -
Lac8g2375 610 Gene3D MFS general substrate transporter like domains 353 572 IPR036259 -
Lac8g2375 610 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 40 580 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0675 Lac-Chr13:5137824 Lac8g2375 Lac-Chr8:41858954 1.00E-209 dispersed
Lac13g0676 Lac-Chr13:5152703 Lac8g2375 Lac-Chr8:41858954 1.60E-215 dispersed
Lac7g2474 Lac-Chr7:42245881 Lac8g2375 Lac-Chr8:41858954 2.90E-177 dispersed
Lac7g2497 Lac-Chr7:42905394 Lac8g2375 Lac-Chr8:41858954 2.60E-133 dispersed
Lac7g2498 Lac-Chr7:42929371 Lac8g2375 Lac-Chr8:41858954 3.70E-151 dispersed
Lac8g0682 Lac-Chr8:12361773 Lac8g2375 Lac-Chr8:41858954 3.90E-163 dispersed
Lac8g2375 Lac-Chr8:41858954 Lac8g2982 Lac-Chr8:46686858 1.20E-75 dispersed
Lac1g2190 Lac-Chr1:43350846 Lac8g2375 Lac-Chr8:41858954 3.50E-179 wgd
Lac10g2988 Lac-Chr10:44461487 Lac8g2375 Lac-Chr8:41858954 6.20E-196 wgd
Lac13g0673 Lac-Chr13:5123155 Lac8g2375 Lac-Chr8:41858954 6.00E-218 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2375 - - - 0.0