Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac8g2437 | ATGGGGAAGAGGGGGGGCTGGTTTTCTGCTGTGAAGAAAGCATTTGCTCCTGAATCTAAGGAAAAGAAAGATCAGAAAACCAACAAATCAAAGAAAAGATGGTTTGGGAAGCCAAAGAAATTGGAGACAGTGGCATCTGCAGAGCCAGCTCCATTGGATGTGTCTGTTCTACCAATTGAAGAGGTGAAACTAGCTGATGCAGAGAATGAACAGAGCAAACATGCTTACTCTGTCGCCATTGCCACTGCAGTTGCTGCCGAGGCGGCCGTTGCAGCGGCTCAGGCTGCGGCCGAGGTCGTTCGGCTCACTACCATCCCTCGGTACTCTGGAAAATCAAAGGAAGAAATAGCAGCTATCAAGATCCAAACTGCATTTCGTGGCTATATGGCAAGAAGGGCCCTGCGGGCATTAAGAGGGTTGGTGAGGCTGAAATCATTGATACAAGGCCAATCTGTTAAAAGACAAGCAACAACCACATTAAGATGCATGCAGACTCTTGCTCGAGTGCAGTCACAGATTCGTGCAAGAAGAATTAGAATGTCAGAGGAGAATCAGGCTCTTCAGAGGCAGCTCCAACAAAAACATGAAAGAGAGCTTGAGAGATTAACTGTTTCTGCAAACAATGAATGGGATGATAGTACCAAATCAAAGGAGCAAGTTGAAGCCAGATTAGTTAACAGGCAAGAAGCAGCAACAAGAAGAGAAAGGGCATTGGCGTATGCTTACTCTCATCAGAATTCATGGAAGAATTCTTCAAAATCTGCAAACCCTACATTCATGGACCCGAACAATCCACACTGGGGCTGGAGTTGGTTAGAACGATGGATGGCCGCTCGTCCATGGGAGACTAAGAGCACCGTCGATTATCACGATCGCGGCTCCGTCAAGAGCGCGATCAGCCATGCAACTTCAATCGGAGACATTGCCAAAGCTTACTCCCGTCGTGATCTCAATCTCGACATCAAGCCTTTTCCAAGAACTCCGACGAGCCAAAAAACGAGCCGAGCTCCAAGTCGCCAATCGCCGGCGACTCCTACGAAAGCGCAATCGTCGCTATCTGCAGGGAGAAAATTGAAGCCGGCGAGTCCAAGAGGATTCGGCTGGGGCGGAGACGACGATTCCAGAAGCGCATTGAGCGTCAAATCGGAGCGGTACCGACGACACAGCATCGCCGGATCATCGGTGAGGGACGACGAAAGCTTCACGAGTTCGCCGTCGGTTCCAAGCTACATGGCGTCCACAGAAGCAGCAAGGGCTAGGTCCCGGTTGTCGAGTCCGATGGGAACGGAGAAAACGGCGGCGACTCCGGAAAAGGGACCGGCCAGTGGCGGCGTAAAGAAGCGGCTCTCGTTCCCCGCCTCGCCGGCGACGGCGAGGAGGCACTCTGGTCCGCCGAAAGTAGACGCTAGCCCGATCAAGAACGTTGCAGAGAGAGATTTTACCGGCGAGAGCAGATAG | 1458 | 51.58 | MGKRGGWFSAVKKAFAPESKEKKDQKTNKSKKRWFGKPKKLETVASAEPAPLDVSVLPIEEVKLADAENEQSKHAYSVAIATAVAAEAAVAAAQAAAEVVRLTTIPRYSGKSKEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKHERELERLTVSANNEWDDSTKSKEQVEARLVNRQEAATRRERALAYAYSHQNSWKNSSKSANPTFMDPNNPHWGWSWLERWMAARPWETKSTVDYHDRGSVKSAISHATSIGDIAKAYSRRDLNLDIKPFPRTPTSQKTSRAPSRQSPATPTKAQSSLSAGRKLKPASPRGFGWGGDDDSRSALSVKSERYRRHSIAGSSVRDDESFTSSPSVPSYMASTEAARARSRLSSPMGTEKTAATPEKGPASGGVKKRLSFPASPATARRHSGPPKVDASPIKNVAERDFTGESR | 485 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 42431493 | 42434585 | + | Lag0029824.1 | Lac8g2437 | 618271 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac8g2437 | 485 | PANTHER | IQ-DOMAIN 5-RELATED | 6 | 435 | - | - | |
| Lac8g2437 | 485 | MobiDBLite | consensus disorder prediction | 395 | 411 | - | - | |
| Lac8g2437 | 485 | Coils | Coil | 177 | 197 | - | - | |
| Lac8g2437 | 485 | Gene3D | iswi atpase | 111 | 149 | - | - | |
| Lac8g2437 | 485 | MobiDBLite | consensus disorder prediction | 376 | 394 | - | - | |
| Lac8g2437 | 485 | SMART | iq_5 | 113 | 135 | IPR000048 | GO:0005515(InterPro) | |
| Lac8g2437 | 485 | ProSiteProfiles | IQ motif profile. | 114 | 142 | - | - | |
| Lac8g2437 | 485 | MobiDBLite | consensus disorder prediction | 319 | 485 | - | - | |
| Lac8g2437 | 485 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Lac8g2437 | 485 | MobiDBLite | consensus disorder prediction | 324 | 356 | - | - | |
| Lac8g2437 | 485 | Pfam | IQ calmodulin-binding motif | 117 | 135 | IPR000048 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac11g0159 | Lac-Chr11:1473226 | Lac8g2437 | Lac-Chr8:42431493 | 2.00E-14 | dispersed | |
| Lac12g1344 | Lac-Chr12:21464418 | Lac8g2437 | Lac-Chr8:42431493 | 4.80E-27 | dispersed | |
| Lac4g1827 | Lac-Chr4:37414795 | Lac8g2437 | Lac-Chr8:42431493 | 8.50E-30 | dispersed | |
| Lac5g2434 | Lac-Chr5:42959095 | Lac8g2437 | Lac-Chr8:42431493 | 5.50E-27 | dispersed | |
| Lac5g3047 | Lac-Chr5:48347472 | Lac8g2437 | Lac-Chr8:42431493 | 2.50E-22 | dispersed | |
| Lac7g0055 | Lac-Chr7:491852 | Lac8g2437 | Lac-Chr8:42431493 | 4.60E-38 | dispersed | |
| Lac7g0706 | Lac-Chr7:5672673 | Lac8g2437 | Lac-Chr8:42431493 | 7.80E-18 | dispersed | |
| Lac7g1342 | Lac-Chr7:13073072 | Lac8g2437 | Lac-Chr8:42431493 | 1.60E-23 | dispersed | |
| Lac8g2437 | Lac-Chr8:42431493 | Lac10g0366 | Lac-Chr10:2856021 | 1.30E-10 | dispersed | |
| Lac12g0517 | Lac-Chr12:5594763 | Lac8g2437 | Lac-Chr8:42431493 | 3.90E-16 | transposed | |
| Lac1g3383 | Lac-Chr1:53405612 | Lac8g2437 | Lac-Chr8:42431493 | 1.20E-33 | transposed | |
| Lac8g2087 | Lac-Chr8:39343750 | Lac8g2437 | Lac-Chr8:42431493 | 5.70E-30 | transposed | |
| Lac1g2108 | Lac-Chr1:42564758 | Lac8g2437 | Lac-Chr8:42431493 | 1.50E-105 | wgd | |
| Lac10g3038 | Lac-Chr10:44910783 | Lac8g2437 | Lac-Chr8:42431493 | 4.50E-79 | wgd | |
| Lac13g0726 | Lac-Chr13:5609100 | Lac8g2437 | Lac-Chr8:42431493 | 2.80E-114 | wgd |
Pathway information