Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2498 ATGGCCGGCAGAGGAGAAGGTCCGGCGATCGGAATCGATCTTGGTACGACCTACTCTTGCGTCGGTGTTTGGCAGCATGATCGAGTTGAGATCATTGCCAACGACCAGGGTAACAGGACGACGCCCTCGTATGTTGCTTTCACCGATACCGAGCGTTTGATCGGTGATGCGGCCAAGAATCAGGTCGCCATGAACCCTATTAACACCGTTTTTGATGCCAAGCGTTTAATTGGCCGAAGATTTAGCGATTCATCCGTCCAGAGTGATATTAAGCTATGGCCTTTCAAAGTTATTGCTGGCCCCGGCGACAAGCCCATGATTGTTGTAAATTACAAAGCTGAGGAGAAACAGTTTTCGGCGGAAGAAATCTCTTCTATGGTACTCATAAAGATGAAGGAGATTGCAGAAGCGTATCTGGGAACAACAGTGAAGAATGCCGTCGTCACTGTCCCAGCCTACTTCAACGATTCGCAGAGACAGGCCACCAAGGATGCTGGGGTCATTTCGGGTCTAAATGTGATGCGTATCATCAATGAACCAACTGCTGCGGCCATTGCTTATGGTCTCGACAAGAAGTCCAGCAGTTCCGGCGAGAAGAATGTTTTAATTTTTGATTTGGGTGGTGGTACTTTTGATGTTTCATTGCTCACAATCGAGGAAGGTATTTTGAGATTGGTCAACCACTTCGTGCAAGAGTTCAAGAGAAAGAACAAGAAAGACATCAGTGGAAACCCCAGGGCTCTGAGGAGGTTGAGAACCGCCTGTGAGAGGGCAAAGAGGACTCTTTCCTCCACAGCTCAAACTACGATCGAGATTGACTCTCTTTACGAGGGTATTGACTTCTATTCAACCATTACCCGTGCTAGATTTGAGGAACTCAATATGGACCTTTTCAGGAAGTGTATGGAACCAGTTGAGAAGTGCTTGAGAGATGCCAAGATGGACAAAAGCACTGTCCATGACGTTGTTCTTGTTGGTGGCTCCACTAGGATTCCCAAGGTGCAGCAACTGTTGCAGGACTTCTTCAATGGCAAAGAGCTCTGCAAGAGTATCAACCCTGATGAAGCTGTTGCCTATGGAGCTGCAGTCCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAGGATCTTTTGCTTCTGGATGTTACTCCTCTGTCCCTTGGACTGGAAACAGCCGGCGGTGTGATGACTGTCCTAATTCCAAGGAATACCACCATCCCCACCAAGAAGGAACAAGTTTTCTCTACGTACTCCGACAACCAACCTGGTGTTTTGATCCAAGTCTACGAAGGAGAGAGGGCAAGAACACGTGACAACAACTTGCTAGGAAAATTTGAGCTCTCTGGCATCCCACCGGCTCCTAGAGGTGTTCCTCAGATCACAGTCTGCTTCGACATCGATGCCAACGGTATTCTAAATGTTTCTGCTGAGGATAAAACCACCGGTCAGAAGAACAAGATCACAATCACTAACGACAAGGGGCGGTTGTCCAAGGAGGAGATTGAGAAGATGGTGCAAGAAGCAGAGAAATACAAGGCCGACGATGAAGAGCACAAGAAGAAGGTTGAAGCTAAAAACGCCTTGGAAAACTATGCTTACAACATGAGGAACACTGTGAGGGATGAGAAGTTCAGCTCTAAATTGGACCCAGCAGACAAGAAGAAGATCGAGGATGCCATTGAACAGGCAATCCAGTGGCTGGACAACAACCAACTTGCTGAGGCCGACGAGTTTGAAGATAAAATGAAGGAGCTTGAGAGCATTTGCAATCCAATTGTTGCTAAGATGTATCAGGGTGCTGGTGGACCTGGCATGGGTGGTGGTGCTATGGATGACGACGATGTTCCTCCTCCATCAGGTGGAAGCGGCGCCGGTCCCAAAATTGAGGAAGTCGACTAA 1905 48.29 MAGRGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIAGPGDKPMIVVNYKAEEKQFSAEEISSMVLIKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSSSSGEKNVLIFDLGGGTFDVSLLTIEEGILRLVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKADDEEHKKKVEAKNALENYAYNMRNTVRDEKFSSKLDPADKKKIEDAIEQAIQWLDNNQLAEADEFEDKMKELESICNPIVAKMYQGAGGPGMGGGAMDDDDVPPPSGGSGAGPKIEEVD 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 42879624 42881991 + Lag0029885.1 Lac8g2498 618332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2498 634 Gene3D - 71 126 - -
Lac8g2498 634 FunFam Heat shock 70 kDa protein 71 126 - -
Lac8g2498 634 FunFam Heat shock protein 70 10 200 - -
Lac8g2498 634 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Lac8g2498 634 Gene3D - 192 223 - -
Lac8g2498 634 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 525 607 IPR029048 -
Lac8g2498 634 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lac8g2498 634 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Lac8g2498 634 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 374 531 IPR029047 -
Lac8g2498 634 Coils Coil 503 523 - -
Lac8g2498 634 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 373 526 IPR029047 -
Lac8g2498 634 PANTHER HEAT SHOCK PROTEIN 70KDA 9 565 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Lac8g2498 634 SUPERFAMILY Actin-like ATPase domain 197 370 IPR043129 -
Lac8g2498 634 FunFam Heat shock cognate 70 kDa protein 2 301 348 - -
Lac8g2498 634 Gene3D - 301 348 - -
Lac8g2498 634 Gene3D Actin; Chain A, domain 4 224 300 - -
Lac8g2498 634 MobiDBLite consensus disorder prediction 601 634 - -
Lac8g2498 634 FunFam Heat shock 70 kDa 373 527 - -
Lac8g2498 634 Gene3D - 349 366 - -
Lac8g2498 634 Pfam Hsp70 protein 9 600 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Lac8g2498 634 Gene3D - 527 601 IPR029048 -
Lac8g2498 634 PRINTS 70kDa heat shock protein signature 378 397 - -
Lac8g2498 634 PRINTS 70kDa heat shock protein signature 319 335 - -
Lac8g2498 634 PRINTS 70kDa heat shock protein signature 8 21 - -
Lac8g2498 634 PRINTS 70kDa heat shock protein signature 36 48 - -
Lac8g2498 634 PRINTS 70kDa heat shock protein signature 351 371 - -
Lac8g2498 634 PRINTS 70kDa heat shock protein signature 146 166 - -
Lac8g2498 634 PRINTS 70kDa heat shock protein signature 459 475 - -
Lac8g2498 634 PRINTS 70kDa heat shock protein signature 58 66 - -
Lac8g2498 634 FunFam Heat shock 70 kDa protein 225 300 - -
Lac8g2498 634 ProSitePatterns Heat shock hsp70 proteins family signature 3. 322 336 IPR018181 -
Lac8g2498 634 CDD HSPA1-2_6-8-like_NBD 9 369 - -
Lac8g2498 634 FunFam Heat shock 70 kDa protein 521 634 - -
Lac8g2498 634 Gene3D - 10 191 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2030 Lac-Chr1:41874176 Lac8g2498 Lac-Chr8:42879624 0.00E+00 dispersed
Lac5g2651 Lac-Chr5:44976485 Lac8g2498 Lac-Chr8:42879624 5.10E-141 dispersed
Lac7g0751 Lac-Chr7:6004913 Lac8g2498 Lac-Chr8:42879624 6.30E-68 dispersed
Lac8g2498 Lac-Chr8:42879624 Lac8g2506 Lac-Chr8:42909906 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2498 K03283 - csv:101210925 1171.38