Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac8g2498 | ATGGCCGGCAGAGGAGAAGGTCCGGCGATCGGAATCGATCTTGGTACGACCTACTCTTGCGTCGGTGTTTGGCAGCATGATCGAGTTGAGATCATTGCCAACGACCAGGGTAACAGGACGACGCCCTCGTATGTTGCTTTCACCGATACCGAGCGTTTGATCGGTGATGCGGCCAAGAATCAGGTCGCCATGAACCCTATTAACACCGTTTTTGATGCCAAGCGTTTAATTGGCCGAAGATTTAGCGATTCATCCGTCCAGAGTGATATTAAGCTATGGCCTTTCAAAGTTATTGCTGGCCCCGGCGACAAGCCCATGATTGTTGTAAATTACAAAGCTGAGGAGAAACAGTTTTCGGCGGAAGAAATCTCTTCTATGGTACTCATAAAGATGAAGGAGATTGCAGAAGCGTATCTGGGAACAACAGTGAAGAATGCCGTCGTCACTGTCCCAGCCTACTTCAACGATTCGCAGAGACAGGCCACCAAGGATGCTGGGGTCATTTCGGGTCTAAATGTGATGCGTATCATCAATGAACCAACTGCTGCGGCCATTGCTTATGGTCTCGACAAGAAGTCCAGCAGTTCCGGCGAGAAGAATGTTTTAATTTTTGATTTGGGTGGTGGTACTTTTGATGTTTCATTGCTCACAATCGAGGAAGGTATTTTGAGATTGGTCAACCACTTCGTGCAAGAGTTCAAGAGAAAGAACAAGAAAGACATCAGTGGAAACCCCAGGGCTCTGAGGAGGTTGAGAACCGCCTGTGAGAGGGCAAAGAGGACTCTTTCCTCCACAGCTCAAACTACGATCGAGATTGACTCTCTTTACGAGGGTATTGACTTCTATTCAACCATTACCCGTGCTAGATTTGAGGAACTCAATATGGACCTTTTCAGGAAGTGTATGGAACCAGTTGAGAAGTGCTTGAGAGATGCCAAGATGGACAAAAGCACTGTCCATGACGTTGTTCTTGTTGGTGGCTCCACTAGGATTCCCAAGGTGCAGCAACTGTTGCAGGACTTCTTCAATGGCAAAGAGCTCTGCAAGAGTATCAACCCTGATGAAGCTGTTGCCTATGGAGCTGCAGTCCAGGCTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAGGATCTTTTGCTTCTGGATGTTACTCCTCTGTCCCTTGGACTGGAAACAGCCGGCGGTGTGATGACTGTCCTAATTCCAAGGAATACCACCATCCCCACCAAGAAGGAACAAGTTTTCTCTACGTACTCCGACAACCAACCTGGTGTTTTGATCCAAGTCTACGAAGGAGAGAGGGCAAGAACACGTGACAACAACTTGCTAGGAAAATTTGAGCTCTCTGGCATCCCACCGGCTCCTAGAGGTGTTCCTCAGATCACAGTCTGCTTCGACATCGATGCCAACGGTATTCTAAATGTTTCTGCTGAGGATAAAACCACCGGTCAGAAGAACAAGATCACAATCACTAACGACAAGGGGCGGTTGTCCAAGGAGGAGATTGAGAAGATGGTGCAAGAAGCAGAGAAATACAAGGCCGACGATGAAGAGCACAAGAAGAAGGTTGAAGCTAAAAACGCCTTGGAAAACTATGCTTACAACATGAGGAACACTGTGAGGGATGAGAAGTTCAGCTCTAAATTGGACCCAGCAGACAAGAAGAAGATCGAGGATGCCATTGAACAGGCAATCCAGTGGCTGGACAACAACCAACTTGCTGAGGCCGACGAGTTTGAAGATAAAATGAAGGAGCTTGAGAGCATTTGCAATCCAATTGTTGCTAAGATGTATCAGGGTGCTGGTGGACCTGGCATGGGTGGTGGTGCTATGGATGACGACGATGTTCCTCCTCCATCAGGTGGAAGCGGCGCCGGTCCCAAAATTGAGGAAGTCGACTAA | 1905 | 48.29 | MAGRGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIAGPGDKPMIVVNYKAEEKQFSAEEISSMVLIKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSSSSGEKNVLIFDLGGGTFDVSLLTIEEGILRLVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKADDEEHKKKVEAKNALENYAYNMRNTVRDEKFSSKLDPADKKKIEDAIEQAIQWLDNNQLAEADEFEDKMKELESICNPIVAKMYQGAGGPGMGGGAMDDDDVPPPSGGSGAGPKIEEVD | 634 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 42879624 | 42881991 | + | Lag0029885.1 | Lac8g2498 | 618332 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac8g2498 | 634 | Gene3D | - | 71 | 126 | - | - | |
Lac8g2498 | 634 | FunFam | Heat shock 70 kDa protein | 71 | 126 | - | - | |
Lac8g2498 | 634 | FunFam | Heat shock protein 70 | 10 | 200 | - | - | |
Lac8g2498 | 634 | SUPERFAMILY | Actin-like ATPase domain | 8 | 191 | IPR043129 | - | |
Lac8g2498 | 634 | Gene3D | - | 192 | 223 | - | - | |
Lac8g2498 | 634 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 525 | 607 | IPR029048 | - | |
Lac8g2498 | 634 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Lac8g2498 | 634 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 203 | 216 | IPR018181 | - | |
Lac8g2498 | 634 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 374 | 531 | IPR029047 | - | |
Lac8g2498 | 634 | Coils | Coil | 503 | 523 | - | - | |
Lac8g2498 | 634 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 373 | 526 | IPR029047 | - | |
Lac8g2498 | 634 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 9 | 565 | IPR013126 | GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro) | |
Lac8g2498 | 634 | SUPERFAMILY | Actin-like ATPase domain | 197 | 370 | IPR043129 | - | |
Lac8g2498 | 634 | FunFam | Heat shock cognate 70 kDa protein 2 | 301 | 348 | - | - | |
Lac8g2498 | 634 | Gene3D | - | 301 | 348 | - | - | |
Lac8g2498 | 634 | Gene3D | Actin; Chain A, domain 4 | 224 | 300 | - | - | |
Lac8g2498 | 634 | MobiDBLite | consensus disorder prediction | 601 | 634 | - | - | |
Lac8g2498 | 634 | FunFam | Heat shock 70 kDa | 373 | 527 | - | - | |
Lac8g2498 | 634 | Gene3D | - | 349 | 366 | - | - | |
Lac8g2498 | 634 | Pfam | Hsp70 protein | 9 | 600 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
Lac8g2498 | 634 | Gene3D | - | 527 | 601 | IPR029048 | - | |
Lac8g2498 | 634 | PRINTS | 70kDa heat shock protein signature | 378 | 397 | - | - | |
Lac8g2498 | 634 | PRINTS | 70kDa heat shock protein signature | 319 | 335 | - | - | |
Lac8g2498 | 634 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Lac8g2498 | 634 | PRINTS | 70kDa heat shock protein signature | 36 | 48 | - | - | |
Lac8g2498 | 634 | PRINTS | 70kDa heat shock protein signature | 351 | 371 | - | - | |
Lac8g2498 | 634 | PRINTS | 70kDa heat shock protein signature | 146 | 166 | - | - | |
Lac8g2498 | 634 | PRINTS | 70kDa heat shock protein signature | 459 | 475 | - | - | |
Lac8g2498 | 634 | PRINTS | 70kDa heat shock protein signature | 58 | 66 | - | - | |
Lac8g2498 | 634 | FunFam | Heat shock 70 kDa protein | 225 | 300 | - | - | |
Lac8g2498 | 634 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 322 | 336 | IPR018181 | - | |
Lac8g2498 | 634 | CDD | HSPA1-2_6-8-like_NBD | 9 | 369 | - | - | |
Lac8g2498 | 634 | FunFam | Heat shock 70 kDa protein | 521 | 634 | - | - | |
Lac8g2498 | 634 | Gene3D | - | 10 | 191 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g2030 | Lac-Chr1:41874176 | Lac8g2498 | Lac-Chr8:42879624 | 0.00E+00 | dispersed | |
Lac5g2651 | Lac-Chr5:44976485 | Lac8g2498 | Lac-Chr8:42879624 | 5.10E-141 | dispersed | |
Lac7g0751 | Lac-Chr7:6004913 | Lac8g2498 | Lac-Chr8:42879624 | 6.30E-68 | dispersed | |
Lac8g2498 | Lac-Chr8:42879624 | Lac8g2506 | Lac-Chr8:42909906 | 0.00E+00 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac8g2498 | K03283 | - | csv:101210925 | 1171.38 |