Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac8g2547 ATGATATCAGTAGCACTGATAAACGCCATGGAAGTTCCTGCAAGTTTAATCAGCTCTATCACTTTAGCTTTGAGCTTGGCAATGGCGGCCATAATCATCTGCCACTTTGTTCTGAAACTCTTTGCAACGGCACCACCAAACCCTAATTTGCCTCCTGGCTGCATGGGCTTCCCCTTCGTTGGAGAGACTCTCAGCTTCCTCAAGCCCCATCATTCTAACTCCATGGGAACCTTCCTCCACCATCACTGCTCAAGGTTTGGAAAGGTTTTCAAATCTCATCTATTCGGGTCGCCGGCGATAGTGTCATGTGATCGAGAGCTAAACATGTTCATTCTTCAGAACGACGACAAGCTTTTCAAAGTGAGTTATCCGAAGGCCATGCATGGCATTCTCGGCAGCAATTCTTTGATTATCGCCGCCGGTGACACCCACCGGAAGCTGAGAAACGTCGTCGTTAGCTTCATCAGCTGGTGCAAGTCCAAACCCACTTTTCTTCGCTGCGTGGACAAGCTCTCCATCTCTTTAATGGAGTCATGGAGATGCCAAACCCAAGTACTTTTCTGCAAACAAGTTAAAATGTTTGCTCTTAGCGTTATGGTGAAAGAATTGTTGGGCATTGGGGCAAACGAGTCGATAGGGTCAAAGATATTGGAAGAGTTTGAAACGTACATGAAAGGCTTTGTTTCTTTGCCTCTAAATCTCCCGGGGACTCCATATTCTAAGGCGGTCAAGGCAAGGAAGAGACTTTCTTGCATTGTGAAAGAGATGATGAGAGAGGGGAAAAGGAGGGAATTGGTGGAAAAGGCAGCTGGGGATGATGATAATTTTCTACAAGTGATAATGTCAAATTGGAAACTTGATGATGAAGAGATTGTGAGTGTTGTGTTGGACATATTGCTTGGAGGTTATGAGACAACAGCTACCCTCATGGGATTGATTGTCTATTTTCTTGCACATTCACCACCCAATGTTCTTGCAAAATTAAAGGAAGAACATCAAGCAATAAGAATTGGCAAAAGGAATGGAGAATGTCTCAATTTGGAAGATTACAAGCAAATGGAGTTCACATGCAATGTAATATTTGAAGCCATGAGATGTGGGAATGTAGTCAAATTTTTGCATAGGGAAGCTCTTAAAGATGTCCAATTCAAAGATATTGTCATACCTTCGGGATGGAAAGTTCATCCAATTTTTTCAGCAATTCATCTTGATCCAACCCTTCATCCAAATCCTCAACAATTCAATCCTTGGAGATGGATGGATGACAAAGAAATGAGCAAAAAAGTGACACCATTTGGTGGAGGGCCAAGGCTCTGTCCAGGGATTGAGCTTGCCAAACTAGAGATTGCTTTCTTCCTCCATCATCTTGTCCTTAATTATAGAGGAGAAGGAGAAATCCAGCCGTCGGTCACGAAACGTCGTGGGTCTCGGTATTCAGAGGCAGTCAGCCGTCGGTGTGGGTTCCTTCCGATTCAGCACGGCAGTGGGTCTCAGTTGGGAGGCTTCGTGGGTCTCGATTTTGAGGACAATCGGAGTGGGTCTCGGTTTTCTGTCGCCGTGGGTCTCGGGTCAGAGGTCGCCGGAGTGTCGCGATCAGAGGCGGCCTTGTTCAGCAGTGGTTCCCGGTATAGGGGGCTGAAACGAATCTTGTCAGGAAGGGAATACACACTGACGGAAAAATCAGAGAAAACAAGCAGCCGCTGGTCAGAGACGCCTTCACGACGGTTTGGGTCTCGGTTTAGCGTCTATGTGGGTCGCGGAGCAGTGACACCGTGGGTCTCTGTTTCAGTGACGATTTCTTTGCAGCTTCAGGCGACGGTTGTGGCTGTGGTTCACGTAAGGATGATCAAGGAGGAGAGCTTTGAAGTTGATTTAGCAACTGACTGTAGCCCAGAATCTAGTACGAAAAGAAAAAAAAGAAGAAAAAACAAAAAGCAGTTACTGATGGAAGGTGTAGATGTCATGAAAACGAAAGAGGTAGGATCTGTCGGGCTGGGGGAAAGCAACATTAACTCTGATAGTAACAAAGGGAAAAAGAAGAAAAGGAGAAAGAAGAATACTAAACAATCTGTAGAAAACTCTATCAAGGCTGAAGCAGGAGAATATGAAAGTAAAGCAGAGAATTCTACGAAAGAGGACAGTCATCTCTCTGATGGTGGAAGTGAGAAAAATGAAAAGAGGCTAATTGCATTGGAAGATGCTGAGAATGAAAGGGCAGACTGCGTAGTTGGACAAAACTCTGGAGAGAAGATTTTAGAGTCTAAAGATGGAAAATCAGATCAAAGGAATATAAACCTTGATAGTGACAAAGTGAAAAAGAAGAAAAAGAGAAAGAAGAATACTAAACAATCTGTAGAAAATTCTATCAAGGCTGAGGCAGGAGAATATGAAAGTAAAGCAGAGAATTCTACGAAAGAGGACAGTCATTTCTTTGATGGTGGAAGTGAGAAAAATGAAAAGAGGCAAATTGCATTGGAAGAAGCTGAGAATGAAAGGGCAGACAGCATAGTTAGACAAAACTGTGGAGAGAAGATTTTAGAGTCTAACAATGGAAAATCAGATCAAAGGAATATAAAGAGGAAGAAACGGCTCTTAAAGGAAGCTGCAAATGCAGATATGCGTGGAATTTGTTACTTGAGCCGAGTTCCTCCACATATGGATCCTCTGAAACTTCGTCAGATCCTCTCACAGTATGGGGAAATACAGAGAATTTATCTTGCACCCGAGGATGCTGCAAGTCAAATACAACGAAAGCGTGCAGGAGGGTTTCGAGGACAATTTTTCTCAGAAGGATGGGTTGAATTTACTGATAAAAGAGTTGCGAAGAAGGTGGCTAATATGTTAAATGGTGAACAAATAGGAGGAAGGAAGAGGTCATCTTTCTACTTTGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTTACTGAAGAAACTGCTTACAAGCATGCCATTCGGGAGCAGAAAATGGCTTTAGAAATTTCTGCCGCTAAGAGGGAGAGGGATTTCTATCTTTCTAAAGTCGAAAAATCACGCGCGTTGAGTTCCATTGAAGAACGGCTAAAGAAGAAGCAGAAGTTGCGAGAAGGTTCAGAAATGAATTCTGAACTTGCTGATAGCGAGAAACTTCCTAAACTAATCCGCACCTTCCCACAAACACAACCAGTTGCAGATTCTGCAGTACAAAACAAACAGGGATTATCCAAAAATATCCTAGCTGGGGTGTTTGGAAGTTCATAG 3252 43.39 MISVALINAMEVPASLISSITLALSLAMAAIIICHFVLKLFATAPPNPNLPPGCMGFPFVGETLSFLKPHHSNSMGTFLHHHCSRFGKVFKSHLFGSPAIVSCDRELNMFILQNDDKLFKVSYPKAMHGILGSNSLIIAAGDTHRKLRNVVVSFISWCKSKPTFLRCVDKLSISLMESWRCQTQVLFCKQVKMFALSVMVKELLGIGANESIGSKILEEFETYMKGFVSLPLNLPGTPYSKAVKARKRLSCIVKEMMREGKRRELVEKAAGDDDNFLQVIMSNWKLDDEEIVSVVLDILLGGYETTATLMGLIVYFLAHSPPNVLAKLKEEHQAIRIGKRNGECLNLEDYKQMEFTCNVIFEAMRCGNVVKFLHREALKDVQFKDIVIPSGWKVHPIFSAIHLDPTLHPNPQQFNPWRWMDDKEMSKKVTPFGGGPRLCPGIELAKLEIAFFLHHLVLNYRGEGEIQPSVTKRRGSRYSEAVSRRCGFLPIQHGSGSQLGGFVGLDFEDNRSGSRFSVAVGLGSEVAGVSRSEAALFSSGSRYRGLKRILSGREYTLTEKSEKTSSRWSETPSRRFGSRFSVYVGRGAVTPWVSVSVTISLQLQATVVAVVHVRMIKEESFEVDLATDCSPESSTKRKKRRKNKKQLLMEGVDVMKTKEVGSVGLGESNINSDSNKGKKKKRRKKNTKQSVENSIKAEAGEYESKAENSTKEDSHLSDGGSEKNEKRLIALEDAENERADCVVGQNSGEKILESKDGKSDQRNINLDSDKVKKKKKRKKNTKQSVENSIKAEAGEYESKAENSTKEDSHFFDGGSEKNEKRQIALEEAENERADSIVRQNCGEKILESNNGKSDQRNIKRKKRLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQYGEIQRIYLAPEDAASQIQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEQIGGRKRSSFYFDLWNIKYLSKFKWDDLTEETAYKHAIREQKMALEISAAKRERDFYLSKVEKSRALSSIEERLKKKQKLREGSEMNSELADSEKLPKLIRTFPQTQPVADSAVQNKQGLSKNILAGVFGSS 1083
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 43205763 43214510 + Lag0029934.1 Lac8g2547 618381
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac8g2547 1083 Pfam Cytochrome P450 51 463 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac8g2547 1083 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac8g2547 1083 MobiDBLite consensus disorder prediction 751 770 - -
Lac8g2547 1083 MobiDBLite consensus disorder prediction 750 820 - -
Lac8g2547 1083 SMART rrm1_1 876 960 IPR000504 GO:0003723(InterPro)
Lac8g2547 1083 PANTHER CYTOCHROME P450 26 49 466 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Lac8g2547 1083 CDD RRM_ABT1_like 875 972 IPR034353 -
Lac8g2547 1083 CDD CYP90-like 82 463 - -
Lac8g2547 1083 MobiDBLite consensus disorder prediction 627 724 - -
Lac8g2547 1083 MobiDBLite consensus disorder prediction 792 820 - -
Lac8g2547 1083 FunFam Cytochrome P450 724B1 46 471 - -
Lac8g2547 1083 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 875 957 IPR000504 GO:0003723(InterPro)
Lac8g2547 1083 SUPERFAMILY RNA-binding domain, RBD 870 957 IPR035979 GO:0003676(InterPro)
Lac8g2547 1083 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac8g2547 1083 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac8g2547 1083 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac8g2547 1083 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac8g2547 1083 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac8g2547 1083 SUPERFAMILY Cytochrome P450 47 461 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac8g2547 1083 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac8g2547 1083 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac8g2547 1083 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac8g2547 1083 MobiDBLite consensus disorder prediction 698 724 - -
Lac8g2547 1083 Pfam RNA recognition motif 878 957 IPR000504 GO:0003723(InterPro)
Lac8g2547 1083 Gene3D - 836 960 IPR012677 -
Lac8g2547 1083 Gene3D Cytochrome P450 42 478 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2963 Lac-Chr1:50416042 Lac8g2547 Lac-Chr8:43205763 1.50E-70 dispersed
Lac5g2065 Lac-Chr5:39155217 Lac8g2547 Lac-Chr8:43205763 1.80E-85 dispersed
Lac8g2547 Lac-Chr8:43205763 Lac10g0507 Lac-Chr10:3875281 4.60E-11 dispersed
Lac10g0502 Lac-Chr10:3853381 Lac8g2547 Lac-Chr8:43205763 3.80E-13 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac8g2547 K12639 - csv:101215045 693.73